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Properties
| Property Name | Value |
|---|
| Product | set1 ash2 histone methyltransferase complex subunit ash2 |
| Orig transcript id | gnl|cribi|Naga_100020g4.5372.mrna |
| Orig protein id | gnl|cribi|Naga_100020g4.5372 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:584336..585943 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6472 ID=rna6472|Name=rna6472|organism=Nannochloropsis gaditana|type=mRNA|length=1533bp
CCAGTCCTACCTCCCACCTTTCTCGATTTCAACATTCTCTGTGCTACTCA
TTAACAGGGATGTTATCCTCCTCACAGACCAGCTCGCCATTTTCAACGGT
GTCTGTGTTTGTAGGGGCCCTGTTGATACGCTTGGGGATGCTGGCAGTAG
GGGCGTGGATCGACAGAGCTTCAAGCACAGTGAAGTACACAGATATCGAT
TATTTCGTCTTCAGTGATGCAGCACGTTTTTTAAGTGATGGTGGATCTCC
ATACGAGCGTGATACTTATCGCTATACACCTTTTTTGGCCTACTTGCTGC
TGCCTAACCTGTGGTTACACCCGGCGTGGGGGAAGGTCTTGTTTGTCATC
TTTGACTTGCTGGTGGGGTTCCTGATAATGAAAATTTCCTCCCAGTATAA
AGTGGCAAACAACACACCGCTGAAGATCCAACCAATGAACGGCTTTTCGT
CGTTTTTTGCTGCGTCTCCTCCAGTATTATATGCGTCATTTTGGCTCTAT
AATCCCCTAGTCATTAATTGCTCAACACGGGGCAGTGCAGACTCCTTAGT
CAGCGCATTGGTTCTTGCGACGGTCTTGCTAGTGCAGCAAAATCGACCTA
TCCTCGCAGCAGCCTTTCATGGGGCAGCAGTCCATTTCAAGGTGTACCCA
ATCATATTCTCCTTCTCTTACCTGGCAGCACTTCCTGAAAGCGACACGGA
TGGCGAGGGACAGGACCTCACTCCCATTGGCTCCTGGCGCAGCGTCTGGC
CATTCTCGACAAGAAAGCGTCTTCTCTTCTCTGTTGTCAGCGCTTTGACG
TTCCTGGGCCTGACTCTGGCCGCTTACGCCCTGTCAGGTCACCCCTACCT
CTCCCAGGGCCTCCTTTACCACCTGACCAGGACAGACAATCGCCATAACT
TCTCTCCCTGGTTCTACGCCATCTACTTGGACTTTCAAGATGAGGAGCGT
CGGCGGTTGTTGGGTCTGGCCGCCTTCCTCCCCCAGCTCCTTCTCCTGGC
CTCCACCTCGCTCACCCTCGGCCCGCGGGACCTGCCTTTCTGTGTGGCCG
TTCAAACCATGGCTTTCGTGGCCTTCAACAAAGTCTGCACCGCCCAGTAT
TTTGCTTGGTACTTCTCCGTCCTCCCCGCTGCAGGGCCCTCCCTCGCGTC
CCTCCCTTCCTCCCTCCCGCTCTTCCTCGGCGTGGCCTGGCTCCTGGCAC
TGGGCGCCTGGCTGGCATGCGCCTACCTACTCGAGTTTCAGGGTCGCAAC
ACTTTTTTTGCGACCTGGATATCGTCCCTTGTCTTTTTGTGCGTTAACGT
GGGGCTGCTTGCCTGGCTCTTAGAGGCGTGGGGTCGGGGAGAGGGAGGAA
TTATGCCCGCGGCGTTGTCGAGGGAGGACGGGATAACCCGGGCGAGGGAG
GGTGGAGGAGGCTTGCGACCAAGAAGGAAGAGAGAGAGGATTCCGGTTAG
TAGCGAGCGAAGATGATCGTAAAAGTACTTTTCAAACGATCCTGACAACC
ACGGGATGTGAATGCGATGCTGGGGGTACTTTA back to topprotein sequence of rna6472 >rna6472-protein ID=rna6472-protein|Name=rna6472|organism=Nannochloropsis gaditana|type=polypeptide|length=437bp
MSKRSSAADTLSPSFLTSAALELVSPTDASPQGNVSGSHAPSKRTRSTVA
TAAATASAPPGGKTLPLIEVPKHVTFSIKESAPQLFLSRDLMEVTGCRAG
YRMAKGSDCVYSGNWYWECEILEDARTVTAATGGDRQSEERAEEDCPHFR
VGWATKQGNLQAPVGYDKHSFGYRDVAGSKIHKCERVDYYGEAYGPGDVV
GCMICLPILPEHMRETALNVGGNSVQAPGFPPPFLPREEVGVSTTSVVGG
VGVIGVAGVAGSASYGRQGGRKGSGPDEDACEDPLLQRELDALGNHIRFF
KNGKDQGPAYTQIPGARYYPAVSLYLAGRVRGNFGPSLIYPPQTSIPFSP
VAALKGGLKRDELALHNQAVNERRAALAARRQRQEATEQQEGGRLVGERH
QQVVGVKEVREEAGNTDERGGEEREGGPAGRVAGHNS back to topmRNA from alignment at CM002468.1:584336..585943- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6472 ID=rna6472|Name=rna6472|organism=Nannochloropsis gaditana|type=mRNA|length=1608bp|location=Sequence derived from alignment at CM002468.1:584336..585943- (Nannochloropsis gaditana)
ATGTCCAAACGCAGTTCGGCGGCAGACGTAAGTGGAGGAAGTAAGGGTAA
CTTCATTTCCGTTTTTGTCGTCTCACATTGCCCCAACGTATTGTTGTCCA
CGCTCACACCCAGACATTGAGCCCGTCATTCCTAACTAGTGCGGCCTTGG
AGCTCGTTTCTCCGACAGACGCATCTCCACAAGGTAACGTCAGCGGCTCG
CATGCCCCATCGAAAAGGACCAGGAGCACAGTCGCCACCGCGGCTGCCAC
GGCGTCTGCCCCACCCGGCGGTAAAACCCTCCCATTGATAGAGGTCCCCA
AGCATGTGACATTTTCGATCAAAGAAAGTGCGCCGCAGCTGTTCCTGTCC
CGAGACCTGATGGAAGTGACGGGATGTCGTGCGGGCTACCGTATGGCGAA
AGGCAGTGATTGTGTATACTCGGGAAACTGGTATTGGGAGTGCGAAATCC
TTGAGGATGCCAGAACAGTGACAGCGGCAACTGGAGGTGATAGGCAAAGC
GAAGAACGGGCGGAGGAAGACTGTCCTCATTTCCGCGTGGGATGGGCAAC
AAAGCAGGGCAACTTACAGGCACCCGTAGGGTACGACAAACACAGTTTTG
GCTATCGCGACGTGGCGGGCTCAAAAATCCACAAATGTGAGCGGGTCGAC
TATTACGGTGAAGCCTATGGACCAGGAGATGTTGTGGGGTGCATGATCTG
CCTTCCGATTCTACCGGAGCACATGCGGGAGACGGCTCTGAACGTGGGGG
GGAACTCAGTGCAAGCGCCAGGTTTTCCCCCTCCCTTTTTGCCGCGAGAG
GAGGTCGGGGTATCGACTACGAGTGTTGTGGGAGGGGTCGGTGTCATAGG
GGTAGCTGGCGTTGCCGGGAGCGCGAGTTATGGCCGGCAGGGCGGAAGGA
AAGGGAGCGGCCCCGACGAGGACGCTTGTGAGGACCCGCTTTTGCAGAGG
GAGCTGGATGCATTAGGAAACCACATCCGTTTTTTCAAGAACGGGAAGGA
TCAAGGGCCGGCTTACACGCAAATACCTGGAGGTCAGTAGAAGACAGGAC
GGGGAGGGATGGAGGGAGGGAGGGAGGGAGGAGTGGGGCGGGGAGGCCGC
TCAGGATCAGCGCCCACCGCGTCAGAGAAGCCTTCAGTGGGGGTCGGGAT
CTCGGCATCTCCCTTCGTAGGTCTCGGCGTTGTGAACTCTTTGTTCTCCT
GTGAATCAAACACTCAGTTCCCCTGCTGTTTCTCTTACAGCCCGGTACTA
CCCCGCCGTCTCCCTCTACCTTGCCGGTCGCGTACGAGGCAACTTCGGTC
CTTCCCTGATATACCCTCCCCAGACCTCCATCCCCTTCTCGCCCGTGGCC
GCCCTCAAAGGTGGTCTCAAACGTGACGAGCTTGCGCTTCATAATCAGGC
AGTAAATGAGCGAAGAGCTGCCTTGGCTGCAAGACGACAGCGGCAGGAAG
CGACGGAGCAGCAAGAGGGAGGGCGGCTGGTGGGAGAGCGCCACCAGCAA
GTGGTGGGAGTGAAGGAAGTGAGAGAGGAGGCGGGGAACACTGATGAGAG
AGGAGGCGAAGAAAGGGAGGGGGGGCCAGCGGGGAGGGTCGCGGGGCACA
ACTCTTAG back to topCoding sequence (CDS) from alignment at CM002468.1:584336..585943- >rna6472 ID=rna6472|Name=rna6472|organism=Nannochloropsis gaditana|type=CDS|length=3942bp|location=Sequence derived from alignment at CM002468.1:584336..585943- (Nannochloropsis gaditana)
CCCGGTACTACCCCGCCGTCTCCCTCTACCTTGCCGGTCGCGTACGAGGC
AACTTCGGTCCTTCCCTGATATACCCTCCCCAGACCTCCATCCCCTTCTC
GCCCGTGGCCGCCCTCAAAGGTGGTCTCAAACGTGACGAGCTTGCGCTTC
ATAATCAGGCAGTAAATGAGCGAAGAGCTGCCTTGGCTGCAAGACGACAG
CGGCAGGAAGCGACGGAGCAGCAAGAGGGAGGGCGGCTGGTGGGAGAGCG
CCACCAGCAAGTGGTGGGAGTGAAGGAAGTGAGAGAGGAGGCGGGGAACA
CTGATGAGAGAGGAGGCGAAGAAAGGGAGGGGGGGCCAGCGGGGAGGGTC
GCGGGGCACAACTCTTAGACATTGAGCCCGTCATTCCTAACTAGTGCGGC
CTTGGAGCTCGTTTCTCCGACAGACGCATCTCCACAAGGTAACGTCAGCG
GCTCGCATGCCCCATCGAAAAGGACCAGGAGCACAGTCGCCACCGCGGCT
GCCACGGCGTCTGCCCCACCCGGCGGTAAAACCCTCCCATTGATAGAGGT
CCCCAAGCATGTGACATTTTCGATCAAAGAAAGTGCGCCGCAGCTGTTCC
TGTCCCGAGACCTGATGGAAGTGACGGGATGTCGTGCGGGCTACCGTATG
GCGAAAGGCAGTGATTGTGTATACTCGGGAAACTGGTATTGGGAGTGCGA
AATCCTTGAGGATGCCAGAACAGTGACAGCGGCAACTGGAGGTGATAGGC
AAAGCGAAGAACGGGCGGAGGAAGACTGTCCTCATTTCCGCGTGGGATGG
GCAACAAAGCAGGGCAACTTACAGGCACCCGTAGGGTACGACAAACACAG
TTTTGGCTATCGCGACGTGGCGGGCTCAAAAATCCACAAATGTGAGCGGG
TCGACTATTACGGTGAAGCCTATGGACCAGGAGATGTTGTGGGGTGCATG
ATCTGCCTTCCGATTCTACCGGAGCACATGCGGGAGACGGCTCTGAACGT
GGGGGGGAACTCAGTGCAAGCGCCAGGTTTTCCCCCTCCCTTTTTGCCGC
GAGAGGAGGTCGGGGTATCGACTACGAGTGTTGTGGGAGGGGTCGGTGTC
ATAGGGGTAGCTGGCGTTGCCGGGAGCGCGAGTTATGGCCGGCAGGGCGG
AAGGAAAGGGAGCGGCCCCGACGAGGACGCTTGTGAGGACCCGCTTTTGC
AGAGGGAGCTGGATGCATTAGGAAACCACATCCGTTTTTTCAAGAACGGG
AAGGATCAAGGGCCGGCTTACACGCAAATACCTGGAGATGTCCAAACGCA
GTTCGGCGGCAGACCCCGGTACTACCCCGCCGTCTCCCTCTACCTTGCCG
GTCGCGTACGAGGCAACTTCGGTCCTTCCCTGATATACCCTCCCCAGACC
TCCATCCCCTTCTCGCCCGTGGCCGCCCTCAAAGGTGGTCTCAAACGTGA
CGAGCTTGCGCTTCATAATCAGGCAGTAAATGAGCGAAGAGCTGCCTTGG
CTGCAAGACGACAGCGGCAGGAAGCGACGGAGCAGCAAGAGGGAGGGCGG
CTGGTGGGAGAGCGCCACCAGCAAGTGGTGGGAGTGAAGGAAGTGAGAGA
GGAGGCGGGGAACACTGATGAGAGAGGAGGCGAAGAAAGGGAGGGGGGGC
CAGCGGGGAGGGTCGCGGGGCACAACTCTTAGACATTGAGCCCGTCATTC
CTAACTAGTGCGGCCTTGGAGCTCGTTTCTCCGACAGACGCATCTCCACA
AGGTAACGTCAGCGGCTCGCATGCCCCATCGAAAAGGACCAGGAGCACAG
TCGCCACCGCGGCTGCCACGGCGTCTGCCCCACCCGGCGGTAAAACCCTC
CCATTGATAGAGGTCCCCAAGCATGTGACATTTTCGATCAAAGAAAGTGC
GCCGCAGCTGTTCCTGTCCCGAGACCTGATGGAAGTGACGGGATGTCGTG
CGGGCTACCGTATGGCGAAAGGCAGTGATTGTGTATACTCGGGAAACTGG
TATTGGGAGTGCGAAATCCTTGAGGATGCCAGAACAGTGACAGCGGCAAC
TGGAGGTGATAGGCAAAGCGAAGAACGGGCGGAGGAAGACTGTCCTCATT
TCCGCGTGGGATGGGCAACAAAGCAGGGCAACTTACAGGCACCCGTAGGG
TACGACAAACACAGTTTTGGCTATCGCGACGTGGCGGGCTCAAAAATCCA
CAAATGTGAGCGGGTCGACTATTACGGTGAAGCCTATGGACCAGGAGATG
TTGTGGGGTGCATGATCTGCCTTCCGATTCTACCGGAGCACATGCGGGAG
ACGGCTCTGAACGTGGGGGGGAACTCAGTGCAAGCGCCAGGTTTTCCCCC
TCCCTTTTTGCCGCGAGAGGAGGTCGGGGTATCGACTACGAGTGTTGTGG
GAGGGGTCGGTGTCATAGGGGTAGCTGGCGTTGCCGGGAGCGCGAGTTAT
GGCCGGCAGGGCGGAAGGAAAGGGAGCGGCCCCGACGAGGACGCTTGTGA
GGACCCGCTTTTGCAGAGGGAGCTGGATGCATTAGGAAACCACATCCGTT
TTTTCAAGAACGGGAAGGATCAAGGGCCGGCTTACACGCAAATACCTGGA
GATGTCCAAACGCAGTTCGGCGGCAGACCCCGGTACTACCCCGCCGTCTC
CCTCTACCTTGCCGGTCGCGTACGAGGCAACTTCGGTCCTTCCCTGATAT
ACCCTCCCCAGACCTCCATCCCCTTCTCGCCCGTGGCCGCCCTCAAAGGT
GGTCTCAAACGTGACGAGCTTGCGCTTCATAATCAGGCAGTAAATGAGCG
AAGAGCTGCCTTGGCTGCAAGACGACAGCGGCAGGAAGCGACGGAGCAGC
AAGAGGGAGGGCGGCTGGTGGGAGAGCGCCACCAGCAAGTGGTGGGAGTG
AAGGAAGTGAGAGAGGAGGCGGGGAACACTGATGAGAGAGGAGGCGAAGA
AAGGGAGGGGGGGCCAGCGGGGAGGGTCGCGGGGCACAACTCTTAGACAT
TGAGCCCGTCATTCCTAACTAGTGCGGCCTTGGAGCTCGTTTCTCCGACA
GACGCATCTCCACAAGGTAACGTCAGCGGCTCGCATGCCCCATCGAAAAG
GACCAGGAGCACAGTCGCCACCGCGGCTGCCACGGCGTCTGCCCCACCCG
GCGGTAAAACCCTCCCATTGATAGAGGTCCCCAAGCATGTGACATTTTCG
ATCAAAGAAAGTGCGCCGCAGCTGTTCCTGTCCCGAGACCTGATGGAAGT
GACGGGATGTCGTGCGGGCTACCGTATGGCGAAAGGCAGTGATTGTGTAT
ACTCGGGAAACTGGTATTGGGAGTGCGAAATCCTTGAGGATGCCAGAACA
GTGACAGCGGCAACTGGAGGTGATAGGCAAAGCGAAGAACGGGCGGAGGA
AGACTGTCCTCATTTCCGCGTGGGATGGGCAACAAAGCAGGGCAACTTAC
AGGCACCCGTAGGGTACGACAAACACAGTTTTGGCTATCGCGACGTGGCG
GGCTCAAAAATCCACAAATGTGAGCGGGTCGACTATTACGGTGAAGCCTA
TGGACCAGGAGATGTTGTGGGGTGCATGATCTGCCTTCCGATTCTACCGG
AGCACATGCGGGAGACGGCTCTGAACGTGGGGGGGAACTCAGTGCAAGCG
CCAGGTTTTCCCCCTCCCTTTTTGCCGCGAGAGGAGGTCGGGGTATCGAC
TACGAGTGTTGTGGGAGGGGTCGGTGTCATAGGGGTAGCTGGCGTTGCCG
GGAGCGCGAGTTATGGCCGGCAGGGCGGAAGGAAAGGGAGCGGCCCCGAC
GAGGACGCTTGTGAGGACCCGCTTTTGCAGAGGGAGCTGGATGCATTAGG
AAACCACATCCGTTTTTTCAAGAACGGGAAGGATCAAGGGCCGGCTTACA
CGCAAATACCTGGAGATGTCCAAACGCAGTTCGGCGGCAGAC back to top
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