NO17G00960, NO17G00960 (gene) Nannochloropsis oceanica

Overview
NameNO17G00960
Unique NameNO17G00960
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2702
Alignment locationchr17:307972..310673 -

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Properties
Property NameValue
DescriptionRubisco LS methyltransferase, substrate-binding domain protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:307972..310673 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036464Rubisco_LSMT_subst-bd_sf
IPR015353Rubisco_LSMT_subst-bd
Vocabulary: Biological Process
TermDefinition
GO:0032259methylation
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0008168methyltransferase activity
Homology
BLAST of NO17G00960 vs. NCBI_GenBank
Match: EWM21136.1 (Rubisco LS methyltransferase, substrate-binding domain protein [Nannochloropsis gaditana])

HSP 1 Score: 491.5 bits (1264), Expect = 4.200e-135
Identity = 283/583 (48.54%), Postives = 357/583 (61.23%), Query Frame = 0
Query:   82 NKSKKKLHDTKSESIEKKESDEQRRIARFLAWLKAHGARFDKIEWPSYRFG--VRGAVALSDIDTEEDIASVPEHLLLTPLVLLENPEIGHVFEENLAEYSDEDMLAILVMHERGKGEASFFFPYLDTLPQLPDSLMVWNDEALSWLQSEDLCMQVHMRRSQMAAHYTRLVEDGLKANWPHLFGANQVEKDEKDEQTLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSFKNFAFAWQSIQARAFGRRLPYSALVPFCDGFNHANVAIKYRLEAGGSNAGAGSSNKDTATSCIYVGGVLEHVEAKKHQQEQQLRQGKEGKGEGGAKSPQLPTRAFHLFPSGENRYKKGEEVCTSYGRRTNEELLLSYGFSLLDNEHEFIDLPMPGIPSPPSWFGASLARLGISXXXXXXXXXXXXXXXXXXXXXIETVDVFKASHALAAGATEIKLELLAYFRSLVACRYFKDTDGEEVGSTIDYLRPFPSVVYEAEALRALQAQVEEVLSAFPTSLEEDEVALKECTTGEEVGGEGR------------REGG--SVNANCRIAALTYRLTRKRILKHHLGMIQKEIRAL 649
            +K  K      + +++ +E +E+RRI RFL WL+AHGAR DKIEWPSY  G  +RGAVAL DI++ ED+ S+PE LLLTP V L++P+IG VFE+NL ++SDEDML IL+MHERGKGE SFF+PYL TLP+LPD+L+ WN+E LSWLQ E L ++V +R SQ+ AHYTRLVE+ LKA WP LFG  +   D  D ++                                YS +NF FAW +IQARAFGRRLPYSAL+P CD FNHANVA+ YRLE       + + N++        GG          Q+E+ +R   EG+        + P R FHL PSG NRYKKGEEV TSYGRRTN ELLL YGF+LLDNEHE + L MPGIPSPPSWF ASL+ LG +                         DV + SH L AGATE+  EL+AYFR+L AC    + D   V   +DY++ FP   +E +A   L A +   L+AFPTS+EEDEV L       + G EG+            R+ G    NA+CR+AALTYRLTRKR++KHHL ++ K + AL
Sbjct:   61 DKEMKMTEHRVNSNMDNEEDEEKRRINRFLTWLRAHGARCDKIEWPSYATGSQIRGAVALDDINSNEDMVSIPEPLLLTPDVALKDPDIGKVFEDNLEDFSDEDMLLILLMHERGKGETSFFYPYLATLPRLPDTLLNWNEEGLSWLQDEGLSLEVFLRESQLTAHYTRLVEEKLKAGWPGLFG--EAPDDASDSES---------------------------KGADPYSLENFRFAWLTIQARAFGRRLPYSALIPLCDSFNHANVAVTYRLE-----PASVALNRE--------GG---------RQREEDVR--LEGQILFPCPDSRSPPRVFHLSPSGSNRYKKGEEVFTSYGRRTNAELLLFYGFALLDNEHESVALSMPGIPSPPSWFQASLSALGTAGSVGGRARSM-------------AEDVLRPSHLLFAGATEVPSELVAYFRALTACCSMNEKD--VVEQKLDYMQHFPCSRHERDAFSTLGAHMSASLAAFPTSIEEDEVELLASLAASK-GSEGKRREVEPWENKGIRDAGVKGENASCRLAALTYRLTRKRVIKHHLELVDKRLAAL 574          
BLAST of NO17G00960 vs. NCBI_GenBank
Match: EWM21137.1 (Rubisco LS methyltransferase, substrate-binding domain protein [Nannochloropsis gaditana])

HSP 1 Score: 491.5 bits (1264), Expect = 4.200e-135
Identity = 283/583 (48.54%), Postives = 357/583 (61.23%), Query Frame = 0
Query:   82 NKSKKKLHDTKSESIEKKESDEQRRIARFLAWLKAHGARFDKIEWPSYRFG--VRGAVALSDIDTEEDIASVPEHLLLTPLVLLENPEIGHVFEENLAEYSDEDMLAILVMHERGKGEASFFFPYLDTLPQLPDSLMVWNDEALSWLQSEDLCMQVHMRRSQMAAHYTRLVEDGLKANWPHLFGANQVEKDEKDEQTLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSFKNFAFAWQSIQARAFGRRLPYSALVPFCDGFNHANVAIKYRLEAGGSNAGAGSSNKDTATSCIYVGGVLEHVEAKKHQQEQQLRQGKEGKGEGGAKSPQLPTRAFHLFPSGENRYKKGEEVCTSYGRRTNEELLLSYGFSLLDNEHEFIDLPMPGIPSPPSWFGASLARLGISXXXXXXXXXXXXXXXXXXXXXIETVDVFKASHALAAGATEIKLELLAYFRSLVACRYFKDTDGEEVGSTIDYLRPFPSVVYEAEALRALQAQVEEVLSAFPTSLEEDEVALKECTTGEEVGGEGR------------REGG--SVNANCRIAALTYRLTRKRILKHHLGMIQKEIRAL 649
            +K  K      + +++ +E +E+RRI RFL WL+AHGAR DKIEWPSY  G  +RGAVAL DI++ ED+ S+PE LLLTP V L++P+IG VFE+NL ++SDEDML IL+MHERGKGE SFF+PYL TLP+LPD+L+ WN+E LSWLQ E L ++V +R SQ+ AHYTRLVE+ LKA WP LFG  +   D  D ++                                YS +NF FAW +IQARAFGRRLPYSAL+P CD FNHANVA+ YRLE       + + N++        GG          Q+E+ +R   EG+        + P R FHL PSG NRYKKGEEV TSYGRRTN ELLL YGF+LLDNEHE + L MPGIPSPPSWF ASL+ LG +                         DV + SH L AGATE+  EL+AYFR+L AC    + D   V   +DY++ FP   +E +A   L A +   L+AFPTS+EEDEV L       + G EG+            R+ G    NA+CR+AALTYRLTRKR++KHHL ++ K + AL
Sbjct:   82 DKEMKMTEHRVNSNMDNEEDEEKRRINRFLTWLRAHGARCDKIEWPSYATGSQIRGAVALDDINSNEDMVSIPEPLLLTPDVALKDPDIGKVFEDNLEDFSDEDMLLILLMHERGKGETSFFYPYLATLPRLPDTLLNWNEEGLSWLQDEGLSLEVFLRESQLTAHYTRLVEEKLKAGWPGLFG--EAPDDASDSES---------------------------KGADPYSLENFRFAWLTIQARAFGRRLPYSALIPLCDSFNHANVAVTYRLE-----PASVALNRE--------GG---------RQREEDVR--LEGQILFPCPDSRSPPRVFHLSPSGSNRYKKGEEVFTSYGRRTNAELLLFYGFALLDNEHESVALSMPGIPSPPSWFQASLSALGTAGSVGGRARSM-------------AEDVLRPSHLLFAGATEVPSELVAYFRALTACCSMNEKD--VVEQKLDYMQHFPCSRHERDAFSTLGAHMSASLAAFPTSIEEDEVELLASLAASK-GSEGKRREVEPWENKGIRDAGVKGENASCRLAALTYRLTRKRVIKHHLELVDKRLAAL 595          
BLAST of NO17G00960 vs. NCBI_GenBank
Match: CBJ28046.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 177.6 bits (449), Expect = 1.400e-40
Identity = 120/368 (32.61%), Postives = 160/368 (43.48%), Query Frame = 0
Query:   91 TKSESIEKKESDEQRRIARFLAWLKAHGARFDKIEWPS--YRFGVRGAVALSDIDTEEDIASVPEHLLLTPLVLLENPEIGHVFEENLAEYSDEDMLAILVMHERGKGEASFFFPYLDTLPQLPDSLMVWNDEALSWLQSEDLCMQVHMRRSQMAAHYTRLVEDGLKANWPHLFGANQVEKDEKDEQTLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSFKNFAFAWQSIQARAFGRRLPYSALVPFCDGFNHANVAIKYRLEAGGSNAGAGSSNKDTATSCIYVGGVLEHVEAKKHQQEQQLRQGKEGKGEGGAKSPQLPTRAFHLFPSGENRYKKGEEVCTSYGRRTNEELLLSYGFSLLDNE 457
            T  E  +     E R    FL WL++HGA  D +EWPS     GVRGAVA  DI   + +  +P  L+++      +P+ GHV   N      ++ LA+ +M E  K E SF++PYL  LP  P +L  WN E+L  LQ   L  +   R  Q+ A Y   +E  L +++P L+ A++                                          Y+F+ F FAW++IQARAFG+RL  SALVPF D  NH NV  KY  + GG+                                                         F LFPSG NRY +  EV  SYGRR N+ LLL YGF++LDNE
Sbjct:    4 TTEEGSDSPAGGEVREEQEFLRWLRSHGAAIDCVEWPSSETESGVRGAVARRDIAPGDHMVIIPHALMMSEFHAKADPKYGHVHRLNTRLLGSDNGLALYIMQEILKEERSFYWPYLRMLP-TPCNLRNWNRESLLLLQDHKLVRRTAARSRQLLALYRETIE-FLSSSYPELYTADR------------------------------------------YTFELFDFAWRTIQARAFGKRLKSSALVPFADCLNHGNVQTKYDFDVGGNG-------------------------------------------------------TFRLFPSGNNRYPRNSEVLNSYGRRANDNLLLDYGFAMLDNE 272          
BLAST of NO17G00960 vs. NCBI_GenBank
Match: OWY93389.1 (hypothetical protein PHMEG_00037234, partial [Phytophthora megakarya])

HSP 1 Score: 170.6 bits (431), Expect = 1.700e-38
Identity = 116/356 (32.58%), Postives = 164/356 (46.07%), Query Frame = 0
Query:  109 RFLAWLKAHGARFDKIEWPSYR-FGVRGAVALSDIDTEEDIASVPEHLLLTPLVLLENPEIGHVFEENLAEYS-DEDMLAILVMHERGKGEASFFFPYLDTLPQLPDSLMVWNDEALSWLQSEDLCMQVHMRRSQMAAHYTRLVEDGLKANWPHLFGANQVEKDEKDEQTLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSFKNFAFAWQSIQARAFGRRLPYSALVPFCDGFNHANVAIKYRLEAGGSNAGAGSSNKDTATSCIYVGGVLEHVEAKKHQQEQQLRQGKEGKGEGGAKSPQLPTRAFHLFPSGENRYKKGEEVCTSYGRRTNEELLLSYGFSLLDNEHEFIDL 463
            RFL WL+ +GA F K++WP+    G+RGAVAL DI T+E +  VP  LL++  +  ++P++  V+ +N   ++ D+ +L + +M E   GE SFF PYL  LP  P+S+  WN + L  L  + L      R S++  +Y R V   L+  +P  F            +TL                               Y+   F FAW++IQAR FGRRLP++ALVPF D  NH+NVA KY  +                                                E G          F L+PS    + KGEEV  SYGRR N +LLL YGF+L DNE +++D+
Sbjct:   14 RFLQWLRDNGATFPKLQWPTTTPNGLRGAVALEDIATDEPMICVPRSLLISEHLCWQDPQLQCVYRDNRDVFTRDDPVLTLFIMRELVLGERSFFHPYLSILP-YPESVQDWNVDELRELHDDRLVAAAARRSSEINVYYDR-VMTRLQQKYPGEF-----------PETL-------------------------------YTLDKFRFAWKTIQARTFGRRLPWTALVPFADCLNHSNVATKYDFDV----------------------------------------------DENG---------MFRLYPSSSTCFAKGEEVFNSYGRRANFQLLLDYGFALPDNEWDYVDV 270          
BLAST of NO17G00960 vs. NCBI_GenBank
Match: GBG32761.1 (Histone-lysine N-methyltransferase setd3 [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 168.7 bits (426), Expect = 6.300e-38
Identity = 121/386 (31.35%), Postives = 175/386 (45.34%), Query Frame = 0
Query:  103 EQRRIARFLAWLKAHGARFDKIEWPS--YRFGVRGAVALSDIDTEEDIASVPEHLLLTPLVLLENPEIGHVFEENLAEYSDED--MLAILVMHERGKGEASFFFPYLDTLPQLPDSLMVWNDEALSWLQSEDLCMQVHMRRSQMAAHYTRLVEDGLKANWPHLFGANQVEKDEKDEQTLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSFKNFAFAWQSIQARAFGRRLPYSALVPFCDGFNHANVAIKYRLEA-GGSNAGAGSSNK-----------------DTATSCIYVGGVLEHVEAKK----------HQQEQQLRQGKEGKGEGGAKSPQLPTRAFHLFPSGENRYKKGEEVCTSYGRRTNEELLLSYGFSLLDNE 457
            E+R  A FL WL+ +GA  DK+EWPS     GVRG VAL DI++ E +  +P+ +++ P V L    +  V+      +  +D  ++A+ +MHER +G+ SF+FPYL+ LP  P  +  W+ E    LQ  DL  +   R   +   Y++ V++ ++ +   L+ A                                            YSF+ F +AW  IQ+RAFGRRLP++A+VPF D  NH NV +KY L   GG N       K                 D A     V G+  H++  +                         +    +  +    F LFP+G+NRY KGEE   SYGRR+N  LLL YGF L +NE
Sbjct:   24 EEREFA-FLQWLRENGAMIDKLEWPSRATTSGVRGTVALQDIESGEPMLEIPQKMIIYPAVCLACEALQPVYHARWRFFQSDDDLIIAVFLMHERLQGKDSFWFPYLEVLP-TPGGIGEWSHEEQLELQDRDLVAEARRRPGALKRLYSQ-VQEAIELS--GLYPAQ-------------------------------------------YSFELFKWAWMVIQSRAFGRRLPWTAMVPFADCLNHNNVQVKYALAMHGGRNHSNVEERKVSLKSNGDLCVAIERKVDEAVGLETVQGIPRHIDTSRGVVQGGKXXXXXXXXXXXXXXXXXADANEDTEHVFEGKFQLFPTGKNRYAKGEEAFNSYGRRSNSFLLLEYGFCLENNE 361          
BLAST of NO17G00960 vs. NCBI_GenBank
Match: XP_008617921.1 (hypothetical protein SDRG_13603 [Saprolegnia diclina VS20] >EQC28729.1 hypothetical protein SDRG_13603 [Saprolegnia diclina VS20])

HSP 1 Score: 165.6 bits (418), Expect = 5.300e-37
Identity = 144/530 (27.17%), Postives = 213/530 (40.19%), Query Frame = 0
Query:  108 ARFLAWLKAHGARFDKIEWPSYRFGVRGAVALSDIDTEEDIASVPEHLLLTPLVLLENPEIGHVFEENLAEYS-DEDMLAILVMHERGKGEASFFFPYLDTLPQLPDSLMVWNDEALSWLQSEDLCMQVHMRRSQMAAHYTRLVEDGLKANWPHLFGANQVEKDEKDEQTLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSFKNFAFAWQSIQARAFGRRLPYSALVPFCDGFNHANVAIKYRLEAGGSNAGAGSSNKDTATSCIYVGGVLEHVEAKKHQQEQQLRQGKEGKGEGGAKSPQLPTRAFHLFPSGENRYKKGEEVCTSYGRRTNEELLLSYGFSLLDNEHEFIDLPMPGIPSPPSWFGASLARLGISXXXXXXXXXXXXXXXXXXXXXIETVDVFKASHALAAGATEIKLELLAYFRSLVACRYFKDTDGEEVGSTIDYLRPFPSVVYEAEALRALQAQVEEVLSAFPTSLEEDEVALKECTTGEEVGGEGRREGGSVNANCRIAALTYRLTRKRILKH 637
            ARFL WL  HGA+ D +       G RG VA  D+   E   S+PE L+++   +  +P++G +F  +   ++ D+ +LA  V H    G  SF++PYL TLP  P+S+  W  + L+ LQ   L    + R +++   Y RL  D L   +P  F A                                            +SF+ F FAWQ+IQAR FGRRLP++ALVP  D  NHAN A  Y  E           NK                                             T  +H        YK+G++V  SYGRR N +LLL YGF+L +NE +++D+ +    S PS    +  R  +                      +   + F+  H ++  +      LL YFR      Y +D         +D   P   V  E  A+  L   +EE+ +A+PTSLEED   L+     + +                + ALT+R+ RK++L +
Sbjct:    7 ARFLRWLTEHGAKIDALAITRDLDGGRGVVATRDLAPNEIAMSIPEALMISEASVKLDPDLGPIFARHSDLFARDDPLLATFVAHHMHLGHHSFYYPYLSTLP-APESIQNWTIDELASLQDPRLVEIANQRNAEIVTWYERLT-DRLFRLYPEPFNATS------------------------------------------FSFETFRFAWQTIQARTFGRRLPWTALVPLADMLNHANHATIYAYE-----------NK---------------------------------------------TFEWH----SSVGYKRGDQVFNSYGRRPNHQLLLDYGFALRENEWDYLDMDLHLETSYPSVLSKTERRAVL-----------------IKAHLMPFKNRFRLMHDMSIAS------LLPYFRCHFLTAYCED---------VDVSCPISDVRVETRAITVLIEVLEELAAAYPTSLEEDAALLQTNDLPDRL----------------LVALTFRMGRKQLLSN 384          
BLAST of NO17G00960 vs. NCBI_GenBank
Match: ETI45878.1 (hypothetical protein F443_09664 [Phytophthora parasitica P1569] >ETM45679.1 hypothetical protein L914_09322 [Phytophthora parasitica] >ETP15709.1 hypothetical protein F441_09591 [Phytophthora parasitica CJ01A1] >KUF92399.1 putative CDP-alcohol phosphatidyltransferase class-I family protein 2 [Phytophthora nicotianae])

HSP 1 Score: 164.9 bits (416), Expect = 9.100e-37
Identity = 109/356 (30.62%), Postives = 163/356 (45.79%), Query Frame = 0
Query:  109 RFLAWLKAHGARFDKIEWP-SYRFGVRGAVALSDIDTEEDIASVPEHLLLTPLVLLENPEIGHVFEENLAEYS-DEDMLAILVMHERGKGEASFFFPYLDTLPQLPDSLMVWNDEALSWLQSEDLCMQVHMRRSQMAAHYTRLVEDGLKANWPHLFGANQVEKDEKDEQTLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSFKNFAFAWQSIQARAFGRRLPYSALVPFCDGFNHANVAIKYRLEAGGSNAGAGSSNKDTATSCIYVGGVLEHVEAKKHQQEQQLRQGKEGKGEGGAKSPQLPTRAFHLFPSGENRYKKGEEVCTSYGRRTNEELLLSYGFSLLDNEHEFIDL 463
            RFL WL+ +GA F K+EWP +   G+RGAVA   I T E +  +P  LL++  +  ++P++G VF +N   ++ D+ ++A+ ++ E    E+SFF PYL  LP  P+S+  W  + L  L  E L      R S+++ +Y R++   L+  +P  F            +TL                               Y+F  F FAW++IQAR FGRRLP++ALVPF D  NH NV+ KY  +   +                                                         F L+PS    + KG EV  SYGRR+N +L+L YGF+L DNE +++D+
Sbjct:    7 RFLQWLRDNGATFPKLEWPVTTPNGLRGAVATETITTGEPMLCIPRRLLISEELCWQDPQLGPVFRDNRDVFTRDDPVMALFIVRELLLKESSFFHPYLSILP-YPESVQDWTHDELHELYDERLVDAAARRSSEVSIYYRRVL-TRLQEKYPGEF-----------PETL-------------------------------YTFDKFKFAWKTIQARTFGRRLPWTALVPFADCLNHNNVSTKYDFDVNDNG-------------------------------------------------------LFRLYPSAATSFVKGAEVFNSYGRRSNFQLMLDYGFALTDNEWDYVDV 263          
BLAST of NO17G00960 vs. NCBI_GenBank
Match: ETL92361.1 (hypothetical protein L917_09296 [Phytophthora parasitica])

HSP 1 Score: 164.9 bits (416), Expect = 9.100e-37
Identity = 109/356 (30.62%), Postives = 163/356 (45.79%), Query Frame = 0
Query:  109 RFLAWLKAHGARFDKIEWP-SYRFGVRGAVALSDIDTEEDIASVPEHLLLTPLVLLENPEIGHVFEENLAEYS-DEDMLAILVMHERGKGEASFFFPYLDTLPQLPDSLMVWNDEALSWLQSEDLCMQVHMRRSQMAAHYTRLVEDGLKANWPHLFGANQVEKDEKDEQTLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSFKNFAFAWQSIQARAFGRRLPYSALVPFCDGFNHANVAIKYRLEAGGSNAGAGSSNKDTATSCIYVGGVLEHVEAKKHQQEQQLRQGKEGKGEGGAKSPQLPTRAFHLFPSGENRYKKGEEVCTSYGRRTNEELLLSYGFSLLDNEHEFIDL 463
            RFL WL+ +GA F K+EWP +   G+RGAVA   I T E +  +P  LL++  +  ++P++G VF +N   ++ D+ ++A+ ++ E    E+SFF PYL  LP  P+S+  W  + L  L  E L      R S+++ +Y R++   L+  +P  F            +TL                               Y+F  F FAW++IQAR FGRRLP++ALVPF D  NH NV+ KY  +   +                                                         F L+PS    + KG EV  SYGRR+N +L+L YGF+L DNE +++D+
Sbjct:    7 RFLQWLRDNGATFPKLEWPVTTPNGLRGAVATETITTGEPMLCIPRRLLISEELCWQDPQLGPVFRDNRDVFTRDDPVMALFIVRELLLKESSFFHPYLSILP-YPESVQDWTHDELHELYDERLVDAAARRSSEVSIYYRRVL-TRLQEKYPGEF-----------PETL-------------------------------YTFDKFKFAWKTIQARTFGRRLPWTALVPFADCLNHNNVSTKYDFDVNDNG-------------------------------------------------------LFRLYPSAATSFVKGAEVFNSYGRRSNFQLMLDYGFALTDNEWDYVDV 263          
BLAST of NO17G00960 vs. NCBI_GenBank
Match: ETP43743.1 (hypothetical protein F442_09569 [Phytophthora parasitica P10297])

HSP 1 Score: 164.9 bits (416), Expect = 9.100e-37
Identity = 109/356 (30.62%), Postives = 163/356 (45.79%), Query Frame = 0
Query:  109 RFLAWLKAHGARFDKIEWP-SYRFGVRGAVALSDIDTEEDIASVPEHLLLTPLVLLENPEIGHVFEENLAEYS-DEDMLAILVMHERGKGEASFFFPYLDTLPQLPDSLMVWNDEALSWLQSEDLCMQVHMRRSQMAAHYTRLVEDGLKANWPHLFGANQVEKDEKDEQTLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSFKNFAFAWQSIQARAFGRRLPYSALVPFCDGFNHANVAIKYRLEAGGSNAGAGSSNKDTATSCIYVGGVLEHVEAKKHQQEQQLRQGKEGKGEGGAKSPQLPTRAFHLFPSGENRYKKGEEVCTSYGRRTNEELLLSYGFSLLDNEHEFIDL 463
            RFL WL+ +GA F K+EWP +   G+RGAVA   I T E +  +P  LL++  +  ++P++G VF +N   ++ D+ ++A+ ++ E    E+SFF PYL  LP  P+S+  W  + L  L  E L      R S+++ +Y R++   L+  +P  F            +TL                               Y+F  F FAW++IQAR FGRRLP++ALVPF D  NH NV+ KY  +   +                                                         F L+PS    + KG EV  SYGRR+N +L+L YGF+L DNE +++D+
Sbjct:    7 RFLQWLRDNGATFPKLEWPVTTPNGLRGAVATETITTGEPMLCIPRRLLISEELCWQDPQLGPVFRDNRDVFTRDDPVMALFIVRELLLKESSFFHPYLSILP-YPESVQDWTHDELHELYDERLVDAAARRSSEVSIYYRRVL-TRLQEKYPGEF-----------PETL-------------------------------YTFDKFKFAWKTIQARTFGRRLPWTALVPFADCLNHNNVSTKYDFDVNDNG-------------------------------------------------------LFRLYPSAATSFVKGAEVFNSYGRRSNFQLMLDYGFALTDNEWDYVDV 263          
BLAST of NO17G00960 vs. NCBI_GenBank
Match: ETK85833.1 (hypothetical protein L915_09458 [Phytophthora parasitica] >ETL39262.1 hypothetical protein L916_09359 [Phytophthora parasitica])

HSP 1 Score: 163.3 bits (412), Expect = 2.600e-36
Identity = 111/356 (31.18%), Postives = 161/356 (45.22%), Query Frame = 0
Query:  109 RFLAWLKAHGARFDKIEWP-SYRFGVRGAVALSDIDTEEDIASVPEHLLLTPLVLLENPEIGHVFEENLAEYS-DEDMLAILVMHERGKGEASFFFPYLDTLPQLPDSLMVWNDEALSWLQSEDLCMQVHMRRSQMAAHYTRLVEDGLKANWPHLFGANQVEKDEKDEQTLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSFKNFAFAWQSIQARAFGRRLPYSALVPFCDGFNHANVAIKYRLEAGGSNAGAGSSNKDTATSCIYVGGVLEHVEAKKHQQEQQLRQGKEGKGEGGAKSPQLPTRAFHLFPSGENRYKKGEEVCTSYGRRTNEELLLSYGFSLLDNEHEFIDL 463
            RFL WL+ +GA F K+EWP +   G+RGAVA   I T E +  +P  LL++  +  ++P++G VF +N   ++ D+ ++A+ ++ E    E+SFF PYL  LP  P+S+  W  + L  L  E L +    RRS   + Y R V   L+  +P  F            +TL                               Y+F  F FAW++IQAR FGRRLP++ALVPF D  NH NV+ KY  +   +                                                         F L+PS    + KG EV  SYGRR+N +L+L YGF+L DNE +++D+
Sbjct:    7 RFLQWLRDNGATFPKLEWPVTTPNGLRGAVATETITTGEPMLCIPRRLLISEELCWQDPQLGPVFRDNRDVFTRDDPVMALFIVRELLLKESSFFHPYLSILP-YPESVQDWTHDELHELYDERL-VDAAARRSFEVSIYYRRVLTRLQEKYPGEF-----------PETL-------------------------------YTFDKFKFAWKTIQARTFGRRLPWTALVPFADCLNHNNVSTKYDFDVNDNG-------------------------------------------------------LFRLYPSAATSFVKGAEVFNSYGRRSNFQLMLDYGFALTDNEWDYVDV 263          
The following BLAST results are available for this feature:
BLAST of NO17G00960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21136.14.200e-13548.54Rubisco LS methyltransferase, substrate-binding do... [more]
EWM21137.14.200e-13548.54Rubisco LS methyltransferase, substrate-binding do... [more]
CBJ28046.11.400e-4032.61conserved unknown protein [Ectocarpus siliculosus][more]
OWY93389.11.700e-3832.58hypothetical protein PHMEG_00037234, partial [Phyt... [more]
GBG32761.16.300e-3831.35Histone-lysine N-methyltransferase setd3 [Aurantio... [more]
XP_008617921.15.300e-3727.17hypothetical protein SDRG_13603 [Saprolegnia dicli... [more]
ETI45878.19.100e-3730.62hypothetical protein F443_09664 [Phytophthora para... [more]
ETL92361.19.100e-3730.62hypothetical protein L917_09296 [Phytophthora para... [more]
ETP43743.19.100e-3730.62hypothetical protein F442_09569 [Phytophthora para... [more]
ETK85833.12.600e-3631.18hypothetical protein L915_09458 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL158nonsL158Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL156nonsL156Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR035ncniR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR085ngnoR085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR084ngnoR084Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR028ngnoR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004816NSK004816Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G00960.1NO17G00960.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|568129gene_7789Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100041g11gene9292Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G00960.1NO17G00960.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G00960 ID=NO17G00960|Name=NO17G00960|organism=Nannochloropsis oceanica|type=gene|length=2702bp
GATAACCACCCAAACAGCAGGGAATTGCCAGTCGTCAATAAAGTGATTGG
TAAATCCATGCAACACACCGCCCCGGCTTTCCTCATCTGCTGCCACGACC
GTGTCTTCTTGGTCCTACTCCTCCTCCTGGCCCTCCACATATCGTGCGTG
TCGGGGTGGCTGCAGCTTTGGCCAGCGACAACGAAGCAGgtacgtgacgc
cgccttggcgtgatcggctcatttttcacttaatttttatcttagcagtg
catccttgaggaggagcaggccgaaggaggccgacactgtaccgtgcaga
gcatcacacccctgtcgggaggcgcaacgatctcatgcagttaaaacatc
tcgggcgtgcccggctccgatacatgtacacctgtcctgaactataaaat
atttgagaaacaaatgataggcttaaatgttgagtatagcataggaaatc
aacgagcgaaatatatttgtcagcattctgagaagccagctgtggcaacg
acagactccccatcaaccattggtgggcgtaccttttttctcgcgccaga
ccatatgtccttcttccacactattcacacagatcatcgtgtcaccaatg
tatttcctaatcctacttagATTGGCTGCTGGGGGCGGCGGCTTATGATG
CAATCCAATATTGAAGTCATGGCCAATGCAGACGTGCACGATAGACCCCC
AAAGAGCAGATATTCCGCCTCCACATTCACCAACAAATCAAAGAAGAAGC
TACATGATACCAAAAGTGAAAGTATCGAAAAGAAGGAGAGTGACGAACAA
CGGCGGATTGCCCGCTTCCTGGCGTGGCTTAAGGCACACGGCGCGCGTTT
CGACAAGATCGAGTGGCCTTCCTACCGATTCGGTGTCCGCGGCGCCGTTG
CTTTGTCAGATATAGACACTGAAGAAGACATTGCTAGCGTCCCGGAACAT
CTTTTGCTTACTCCGCTTGTGCTGTTGGAGAATCCAGAGATTGGGCATGT
GTTCGAAGAGAACCTCGCGGAATATTCCGATGAAGACATGCTGGCCATTT
TAGTCATGCACGAACGTGGAAAAGGCGAAGCCAGCTTCTTCTTTCCTTAT
CTGGATACTCTCCCGCAGCTGCCAGACAGTCTTATGGTGTGGAATGACGA
GGCCTTAAGCTGGCTACAGAGCGAAGATCTTTGTATGCAGGTGCACATGC
GGAGGAGTCAGATGGCAGCGCATTACACGAGGTTGGTCGAAGATGGATTG
AAGGCGAATTGGCCTCATCTCTTTGGAGCTAACCAAGTAGAAAAGGACGA
GAAAGATGAACAGACGCTCCCTCCCTTTTATTCCTCCTATCCTACTTCCT
CCTTTTCCGATGACAACAACGGGGACACGGAGGAAGAGGAAAATGATGAC
GATGATGACCCGTACTCTTTCAAAAACTTTGCCTTTGCTTGGCAAAGTAT
CCAAGCGCGGGCATTTGGTCGGCGCTTGCCGTATTCTGCTTTGGTCCCTT
TCTGTGATGGGTTTAATCACGCTAATGTCGCGATCAAATATCGACTGGAG
GCAGGGGGCAGCAATGCGGGGGCGGGTAGTAGTAATAAGGATACCGCCAC
CAGTTGCATCTATGTTGGTGGTGTGCTGGAGCACGTAGAGGCGAAGAAGC
ACCAACAAGAGCAGCAGCTGCGGCAAGGAAAAGAAGGCAAAGGAGAGGGC
GGGGCGAAGTCCCCTCAGCTTCCAACTCGTGCCTTTCACCTCTTCCCCAG
CGGCGAGAATCGCTACAAAAAGGGTGAAGAAGTCTGCACTTCCTATGGGC
GACGAACCAATGAAGAGCTTCTTCTTTCCTACGGCTTTTCCCTTCTTGAC
AATGAGCATGAGTTCATAGACCTTCCTATGCCAGGCATCCCTTCCCCCCC
GTCCTGGTTCGGTGCCTCGCTGGCCCGGCTTGGGATCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGGAAG
AAGATAGAAACCGTCGATGTGTTTAAGGCCTCGCACGCCTTGGCCGCGGG
AGCAACTGAGATCAAATTGGAATTACTCGCCTACTTTCGGTCGCTGGTGG
CGTGCCGTTATTTCAAAGATACGGACGGTGAGGAGGTGGGGAGCACAATT
GATTACTTGCGGCCTTTTCCATCAGTAGTTTATGAAGCCGAGGCCCTGAG
GGCGTTGCAAGCGCAGGTAGAAGAAGTGCTTTCTGCTTTTCCCACCTCTT
TGGAGGAGGACGAGGTGGCGCTGAAAGAGTGTACGACAGGAGAAGAGGTA
GGAGGAGAAGGAAGGAGGGAGGGAGGAAGTGTGAATGCGAACTGTCGAAT
TGCAGCATTGACGTACCGATTGACTCGGAAACGGATTTTGAAGCACCATT
TGGGGATGATCCAAAAGGAGATACGAGCCTTGGTGGAAGATGAGGAGGAC
GACAGAAAGGGACTCGACAGAAGAAATAGCCAGAGTGGTAACAGAAGAGA
GATAATACGATTGACTGAAAGATTGGGATTGAATGATTCATGATGGTGAT
CACCACACGAACATGCACCATATACATATATTCATATAGATACATACAAG
TGACTCCGAGTGTGTTTGTGGAGCAATATCCGCATCTCCTGCATTACGTG
TGAACAAAACCATTCAGGTAAACAAGAAAAATTTATTCGTACAGGTGCTG
AT
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protein sequence of NO17G00960.1

>NO17G00960.1-protein ID=NO17G00960.1-protein|Name=NO17G00960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=685bp
MQHTAPAFLICCHDRVFLVLLLLLALHISCVSGWLQLWPATTKQIGCWGR
RLMMQSNIEVMANADVHDRPPKSRYSASTFTNKSKKKLHDTKSESIEKKE
SDEQRRIARFLAWLKAHGARFDKIEWPSYRFGVRGAVALSDIDTEEDIAS
VPEHLLLTPLVLLENPEIGHVFEENLAEYSDEDMLAILVMHERGKGEASF
FFPYLDTLPQLPDSLMVWNDEALSWLQSEDLCMQVHMRRSQMAAHYTRLV
EDGLKANWPHLFGANQVEKDEKDEQTLPPFYSSYPTSSFSDDNNGDTEEE
ENDDDDDPYSFKNFAFAWQSIQARAFGRRLPYSALVPFCDGFNHANVAIK
YRLEAGGSNAGAGSSNKDTATSCIYVGGVLEHVEAKKHQQEQQLRQGKEG
KGEGGAKSPQLPTRAFHLFPSGENRYKKGEEVCTSYGRRTNEELLLSYGF
SLLDNEHEFIDLPMPGIPSPPSWFGASLARLGISSSSSSSSSSSSSSSSS
SSGKKIETVDVFKASHALAAGATEIKLELLAYFRSLVACRYFKDTDGEEV
GSTIDYLRPFPSVVYEAEALRALQAQVEEVLSAFPTSLEEDEVALKECTT
GEEVGGEGRREGGSVNANCRIAALTYRLTRKRILKHHLGMIQKEIRALVE
DEEDDRKGLDRRNSQSGNRREIIRLTERLGLNDS*
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Synonyms
Publications