Naga_100041g11, gene9292 (gene) Nannochloropsis gaditana

Overview
NameNaga_100041g11
Unique Namegene9292
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037254.1:199277..201656 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100041g11
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:199277..201656 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL085ngnoL085Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL084ngnoL084Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL082ngnoL082Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO17G01030NO17G01030Nannochloropsis oceanica (N. oceanica IMET1)gene
NO17G00960NO17G00960Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna9572rna9572-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna9571rna9571-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna9572rna9572Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna9571rna9571Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna9572

>rna9572-protein ID=rna9572-protein|Name=rna9572|organism=Nannochloropsis gaditana|type=polypeptide|length=622bp
MHRTSSSSYLVLALLLLLATSSEPFSFGWLFSRNKLSKKQQAQNDYCYPW
LEGKKLVNARQSHEQSVDDVLLMCHDRISVGDKEMKMTEHRVNSNMDNEE
DEEKRRINRFLTWLRAHGARCDKIEWPSYATGSQIRGAVALDDINSNEDM
VSIPEPLLLTPDVALKDPDIGKVFEDNLEDFSDEDMLLILLMHERGKGET
SFFYPYLATLPRLPDTLLNWNEEGLSWLQDEGLSLEVFLRESQLTAHYTR
LVEEKLKAGWPGLFGEAPDDASDSESKGADPYSLENFRFAWLTIQARAFG
RRLPYSALIPLCDSFNHANVAVTYRLEPASVALNREGGRQREEDVRLEGQ
ILFPCPDSRSPPRVFHLSPSGSNRYKKGEEVFTSYGRRTNAELLLFYGFA
LLDNEHESVALSMPGIPSPPSWFQASLSALGTAGSVGGRARSMAEDVLRP
SHLLFAGATEVPSELVAYFRALTACCSMNEKDVVEQKLDYMQHFPCSRHE
RDAFSTLGAHMSASLAAFPTSIEEDEVELLASLAASKGSEGKRREVEPWE
NKGIRDAGVKGENASCRLAALTYRLTRKRVIKHHLELVDKRLAALNATLR
MERSQETAFVVTENASERKKKK
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protein sequence of rna9571

>rna9571-protein ID=rna9571-protein|Name=rna9571|organism=Nannochloropsis gaditana|type=polypeptide|length=601bp
MYWKSAQAIAEQPFHQIMQQAQNDYCYPWLEGKKLVNARQSHEQSVDDVL
LMCHDRISVGDKEMKMTEHRVNSNMDNEEDEEKRRINRFLTWLRAHGARC
DKIEWPSYATGSQIRGAVALDDINSNEDMVSIPEPLLLTPDVALKDPDIG
KVFEDNLEDFSDEDMLLILLMHERGKGETSFFYPYLATLPRLPDTLLNWN
EEGLSWLQDEGLSLEVFLRESQLTAHYTRLVEEKLKAGWPGLFGEAPDDA
SDSESKGADPYSLENFRFAWLTIQARAFGRRLPYSALIPLCDSFNHANVA
VTYRLEPASVALNREGGRQREEDVRLEGQILFPCPDSRSPPRVFHLSPSG
SNRYKKGEEVFTSYGRRTNAELLLFYGFALLDNEHESVALSMPGIPSPPS
WFQASLSALGTAGSVGGRARSMAEDVLRPSHLLFAGATEVPSELVAYFRA
LTACCSMNEKDVVEQKLDYMQHFPCSRHERDAFSTLGAHMSASLAAFPTS
IEEDEVELLASLAASKGSEGKRREVEPWENKGIRDAGVKGENASCRLAAL
TYRLTRKRVIKHHLELVDKRLAALNATLRMERSQETAFVVTENASERKKK
K
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Synonyms
Publications