NO17G00230, NO17G00230 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G00230 vs. NCBI_GenBank
Match: OON06084.1 (hypothetical protein, variant [Batrachochytrium salamandrivorans]) HSP 1 Score: 109.0 bits (271), Expect = 6.100e-20 Identity = 60/164 (36.59%), Postives = 90/164 (54.88%), Query Frame = 0 Query: 65 RSLVEKH----GGEFTTHFNVHVTALIASAVDTEKYRGAVKFGTPIVTRAWLDASIAHGKAADFASYLLPPLYELKVTSTGFMPDEKREMREAVERLGGVYATDLEMDFTSFLIARRAEGEKYQAARKWNIRVVSRDWLQAC--ERRKVCDSGEAFPVLPTSHS 223 R+LVE+ GG+FT F HVT LI+S+ TEKYR A+ G PI++ W+ + F +YLLPP + V +GF + + E+ + V LGG + L D T LI G KY+ AR+W + +VS +WL C +R +V ++G + + P+ S Sbjct: 20 RNLVERRVVELGGQFTGCFTTHVTHLISSSTSTEKYRVALDLGVPIISPPWVSCLESSDDIEPFENYLLPPFKGILVCVSGFPTEVRHEIEQRVMELGGAFTLVLSKDCT-HLICISPSGRKYEFAREWQLEIVSTEWLNECCKQRGRVMEAG--YRISPSGQS 180
BLAST of NO17G00230 vs. NCBI_GenBank
Match: OON06083.1 (hypothetical protein BSLG_04176 [Batrachochytrium salamandrivorans]) HSP 1 Score: 109.0 bits (271), Expect = 6.100e-20 Identity = 60/164 (36.59%), Postives = 90/164 (54.88%), Query Frame = 0 Query: 65 RSLVEKH----GGEFTTHFNVHVTALIASAVDTEKYRGAVKFGTPIVTRAWLDASIAHGKAADFASYLLPPLYELKVTSTGFMPDEKREMREAVERLGGVYATDLEMDFTSFLIARRAEGEKYQAARKWNIRVVSRDWLQAC--ERRKVCDSGEAFPVLPTSHS 223 R+LVE+ GG+FT F HVT LI+S+ TEKYR A+ G PI++ W+ + F +YLLPP + V +GF + + E+ + V LGG + L D T LI G KY+ AR+W + +VS +WL C +R +V ++G + + P+ S Sbjct: 20 RNLVERRVVELGGQFTGCFTTHVTHLISSSTSTEKYRVALDLGVPIISPPWVSCLESSDDIEPFENYLLPPFKGILVCVSGFPTEVRHEIEQRVMELGGAFTLVLSKDCT-HLICISPSGRKYEFAREWQLEIVSTEWLNECCKQRGRVMEAG--YRISPSGQS 180
BLAST of NO17G00230 vs. NCBI_GenBank
Match: KZS08586.1 (DNA topoisomerase 2-binding protein 1 [Daphnia magna]) HSP 1 Score: 108.2 bits (269), Expect = 1.000e-19 Identity = 98/365 (26.85%), Postives = 164/365 (44.93%), Query Frame = 0 Query: 38 MQNLPPQVF----RKMTLSSTGFSEQTNINFRSLVEKHGGEFTTHFNVHVTALIASAVD--TEKYRGAVKFGTPIVTRAWLDA-------SIAHGKAADFASYLLPPLYELKVTSTGFMPDEKREMREAVERLGGVYATDLEMDFTSFLIARRAEGEKYQAARKWNIRVVSRDWLQACERRKVCDSGEAFPVLPTSHSPPPLHKEGGREGRGKGGLARSHSIGPPIAQELPLLSHLVRPEALVHLAGGDRYEGGRXXXXXXXXE--DDVEAALPSLPSSMALDGCVVFLAGKD-RIATKLKRMLVLLVRKGGAALAPRVDSAVTHVLVAHVMFLTSSNVQQLVKHPTSPLVVTREWLLASVRAQR 387 + ++P VF + + +++TG S Q + + V+ GG +++ F+V+VT LI +V + K++ A+ P++ W+DA HG FA Y PP L + + ++ +++ +E GG Y+ LEM T+ LI AEGEKY AR+W IR + +W+ + +AF ++ S PP K G + SI I E R + + G E + ++ A+ S + LDGC VFL+G D KL+R+L G A + +++HV+V + +QQL+ P +VT EW++ S+R +R Sbjct: 108 LPDVPTPVFTVAMKGIIVTTTGCSPQEKKDIQEKVQFMGGLYSSAFSVNVTHLIVKSVADFSLKFKVAISRDVPVMVPNWVDAVWNASIKESVHGTDPMFARYACPPFQGLVICVSQIPIKDREALKKIIEANGGRYSGQLEMGKTNILITTSAEGEKYTYARRWKIRCLKPEWIHTSLNKGYAVDPDAF-IVEKSTLPPRCSTPEADHSVMKFG---NSSINSTILNE-------SRVQQIDETVGSTTLILNHQQCDLRSSEALESLDLAI-SKKAGPFLDGCKVFLSGFDGSPMEKLRRIL----NNAGVARFNSISESLSHVIVGKTVEEDWKQLQQLMH---KPHIVTVEWVVQSLRLKR 453
BLAST of NO17G00230 vs. NCBI_GenBank
Match: EFX68227.1 (hypothetical protein DAPPUDRAFT_301523 [Daphnia pulex]) HSP 1 Score: 105.1 bits (261), Expect = 8.800e-19 Identity = 95/363 (26.17%), Postives = 162/363 (44.63%), Query Frame = 0 Query: 38 MQNLPPQVF----RKMTLSSTGFSEQTNINFRSLVEKHGGEFTTHFNVHVTALIASAVD--TEKYRGAVKFGTPIVTRAWLDA-------SIAHGKAADFASYLLPPLYELKVTSTGFMPDEKREMREAVERLGGVYATDLEMDFTSFLIARRAEGEKYQAARKWNIRVVSRDWLQACERRKVCDSGEAFPVLPTSHSPPPLHKEGGREGRGKGGLARSHSIGPPIAQELPLLSHLVRPEALVHLAGGDRYEGGRXXXXXXXXEDDVEAALPSLPSSMALDGCVVFLAGKD-RIATKLKRMLVLLVRKGGAALAPRVDSAVTHVLVAHVMFLTSSNVQQLVKHPTSPLVVTREWLLASVRAQR 387 + ++P VF + + +++TG + Q + V+ GG +++ F+V+VT LI +V + K++ A+ P++ W+DA HG FA Y PP L + + ++ +++ +E GG Y+ LEM T+ LI AEGEKY A++W IR + +W+ + ++F V + +PP K G + SI I E + H+ + R D ++ A+ S + LDGC VF++G D KL+R+L G A + +++HV+V + +QQL+ P VVT EW+ S+R +R Sbjct: 98 LPDVPTPVFTVAMKGIIVTTTGCTPQEKKEIQEKVQFMGGLYSSAFSVNVTHLIVKSVADFSLKFKVAINRDIPVMIPNWVDAVWNASLKESVHGTDPMFARYACPPFQGLVICVSQIPVKDREALKKIIEANGGRYSGQLEMGKTNILITTSAEGEKYTYAKRWKIRCLKPEWIHTSLNKGYAADPDSFIVESKTTNPPRCSTPEADHSVMKFG---NSSINSTILNE-SRVQHIDETVGSTTSILSIQQSDSRTTEAL----DTLDLAI-SKKAGPFLDGCKVFISGFDGPHMEKLRRIL----NNAGVARFNSISESLSHVIVGKTVEEDWKQLQQLMH---KPHVVTVEWVAQSLRLKR 444
BLAST of NO17G00230 vs. NCBI_GenBank
Match: XP_006678225.1 (hypothetical protein BATDEDRAFT_87455 [Batrachochytrium dendrobatidis JAM81] >EGF81504.1 hypothetical protein BATDEDRAFT_87455 [Batrachochytrium dendrobatidis JAM81]) HSP 1 Score: 104.8 bits (260), Expect = 1.100e-18 Identity = 55/163 (33.74%), Postives = 88/163 (53.99%), Query Frame = 0 Query: 44 QVFRKMTLSSTGFSEQTNINFRSLVEKHGGEFTTHFNVHVTALIASAVDTEKYRGAVKFGTPIVTRAWLDASIAHGKAADFASYLLPPLYELKVTSTGFMPDEKREMREAVERLGGVYATDLEMDFTSFLIARRAEGEKYQAARKWNIRVVSRDWLQACERRK 207 Q+ + + +G SE V + GG+FT F HVT LI+S+ T+KY+ A++ G PI++ W+ ++ F +YLLPP + V +GF + ++E+ + V LGG + L D T LI G KY+ A++W + VVS DWL C +++ Sbjct: 3 QLLQGFVVCVSGLSEPDRNIVEQRVIELGGKFTGSFTTHVTHLISSSTSTDKYKVALELGVPIISPQWVSCLESNNDIEPFNNYLLPPFKGILVCVSGFPTEVRQEIEQRVMELGGAFTLVLSKDCT-HLICLSPSGRKYEFAKEWKLDVVSIDWLNECCKQR 164
BLAST of NO17G00230 vs. NCBI_GenBank
Match: ELT90028.1 (hypothetical protein CAPTEDRAFT_225496 [Capitella teleta]) HSP 1 Score: 104.8 bits (260), Expect = 1.100e-18 Identity = 83/340 (24.41%), Postives = 149/340 (43.82%), Query Frame = 0 Query: 49 MTLSSTGFSEQTNINFRSLVEKHGGEFTTHFNVHVTALIASAVDTEKYRGAVKFGTPIVTRAWLD-------ASIAHGKAADFASYLLPPLYELKVTSTGFMPDEKREMREAVERLGGVYATDLEMDFTSFLIARRAEGEKYQAARKWNIRVVSRDWLQACERRKVCDSGEAFPVLPTSHSPPPLHKEGGREGRGKGGLARSHSIGPPIAQELPLLSHLVRPEALVHLAGGDRYEGGRXXXXXXXXEDDVEAALPSLPS--SMALDGCVVFLAGKDRIATKLKRMLVLLVRKGGAALAPRVDSAVTHVLVAHVMFLTSSNVQQLVKHPTSPLVVTREWLL 380 +T+S TG + T V+ GE + F+ VT L+A V ++KY A G I+ WLD AS H A+F + P L +T +G ++++++E +ER GG Y +++++ + LI A+G+KY+ A+KW I +V DWL C ++G A + + + G G + S + D ++ + ++PS M LDGC +FL+G + A +L++ L ++ GG +++ +V+HV++ +++Q+ + P VVT +WL+ Sbjct: 139 ITVSCTGLPKATRETLHHRVQWMCGEVSKDFHEGVTHLVAGEVGSKKYLVAANLGKSIMAPEWLDAVYESSKASFTHASEAEFNQWKCPLLRGYVITVSGLNSSDRQKIKETIEREGGRYTGEMKINECTHLIINEAKGQKYEFAKKWRIHIVRPDWLNTC-----IEAGYA------------VEEYKYKVTEGNPGQGATISTXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTTMQTTFNQTRSVDPLDLLVQNMPSRGDMFLDGCKIFLSGFN--ANQLEK-LRRIINHGGGTRFNQINGSVSHVIIGD---RVDEDLEQIERSGLRPHVVTVDWLV 455
BLAST of NO17G00230 vs. NCBI_GenBank
Match: OAJ38315.1 (hypothetical protein BDEG_22262 [Batrachochytrium dendrobatidis JEL423]) HSP 1 Score: 104.8 bits (260), Expect = 1.100e-18 Identity = 55/163 (33.74%), Postives = 88/163 (53.99%), Query Frame = 0 Query: 44 QVFRKMTLSSTGFSEQTNINFRSLVEKHGGEFTTHFNVHVTALIASAVDTEKYRGAVKFGTPIVTRAWLDASIAHGKAADFASYLLPPLYELKVTSTGFMPDEKREMREAVERLGGVYATDLEMDFTSFLIARRAEGEKYQAARKWNIRVVSRDWLQACERRK 207 Q+ + + +G SE V + GG+FT F HVT LI+S+ T+KY+ A++ G PI++ W+ ++ F +YLLPP + V +GF + ++E+ + V LGG + L D T LI G KY+ A++W + VVS DWL C +++ Sbjct: 3 QLLQGFVVCVSGLSEPDRNIVEQRVIELGGKFTGSFTTHVTHLISSSTSTDKYKVALELGVPIISPQWVSCLESNNDIEPFNNYLLPPFKGILVCVSGFPTEVRQEIEQRVMELGGAFTLVLSKDCT-HLICLSPSGRKYEFAKEWKLDVVSIDWLNECCKQR 164
BLAST of NO17G00230 vs. NCBI_GenBank
Match: XP_013079060.1 (PREDICTED: DNA topoisomerase 2-binding protein 1-B-like [Biomphalaria glabrata]) HSP 1 Score: 103.6 bits (257), Expect = 2.600e-18 Identity = 91/367 (24.80%), Postives = 153/367 (41.69%), Query Frame = 0 Query: 35 RSTMQNLPPQVFRKMTLSSTGFSEQTNINFRSLVEKHGGEFTTHFNVHVTALIASAVDTEKYRGAVKFGTPIVTRAWL-----DASIAHGKAAD--FASYLLPPLYELKVTSTGFMPDEKREMREAVERLGGVYATDLEMDFTSFLIARRAEGEKYQAARKWNIRVVSRDWLQAC-ERRKVCD-SGEAFPVLPTSHSPPPLHKEGGREGRGKGGLARSHSIGPPIAQELPLLSHLVRPEALVHLAGGDRYEGGRXXXXXXXXEDDVEAALPSL------------PSSMALDGCVVFLA-GKDRIATKLKRMLVLLVRKGGAALAPRVDSAVTHVLVAHVMFLTSSNVQQLVKHPTSPLVVTREWLL 380 R+ Q + + + L T ++T L + GGE + +T L+A V + KY A + G I+ + W+ + H A D F Y P L + +GF EK +MR + GG Y+ +L+M+ + LI + +G K++AA+ W IR+V+ WL C E++K D F V S E R +GP I ++ +S + P + + R A L + + LDGC ++L+ K + K K+ ++ GG A + ++HV+V ++ SS ++Q++K SP VVT +WL+ Sbjct: 95 RNRKQPIYNLAMKGVKLCCTSVDKKTRDEIMKLTQLMGGEVSCDLTADITHLVAGEVGSNKYLVASENGKQIMVKEWVFKVWEVSQTRHIFATDDMFTKYSCPAFLGLTIVVSGFTVGEKNKMRNLITSYGGKYSGELQMNECTHLIVKEPKGPKFEAAKNWQIRIVNEQWLLHCLEKQKYLDPKAYQFNVTAVSKKVNTSTPE------------RISVLGPNI-NDISAIS-VTGPNSSMLRVDETNMTSSRLSCMFTTTGKGTNIAETRLGVTGFGDNTTLPTADVFLDGCKIYLSCMKSSVEDKAKK----IISAGGGLRALNISEGISHVIVGDIV---SSEIKQILKLQESPFVVTIDWLM 440
BLAST of NO17G00230 vs. NCBI_GenBank
Match: XP_013420625.1 (DNA topoisomerase 2-binding protein 1 isoform X1 [Lingula anatina]) HSP 1 Score: 103.2 bits (256), Expect = 3.300e-18 Identity = 83/342 (24.27%), Postives = 152/342 (44.44%), Query Frame = 0 Query: 47 RKMTLSSTGFSEQTNINFRSLVEKHGGEFTTHFNVHVTALIASAVDTEKYRGAVKFGTPIVTRAWLD-------ASIAHGKAADFASYLLPPLYELKVTSTGFMPDEKREMREAVERLGGVYATDLEMDFTSFLIARRAEGEKYQAARKWNIRVVSRDWLQACERRKVCDSGEAFPVLPTSHSPPPLHKEGGREGRGKGGLARSHSIGPPIAQELPLLSHLVRPEALVHLAGGDRYEGGRXXXXXXXXEDDV-EAALPSLPSSMALDGCVVFLAG-KDRIATKLKRMLVLLVRKGGAALAPRVDSAVTHVLVAHVMFLTSSNVQQLVKHPTSPLVVTREWLL 380 + + +S TG + +LVE GGE + +F VT L+A V ++KY A I+ W+D HG +F +Y P +L +T +G DE+ E+++ VE GG Y +++++ + LI +G+KY+ A KW I +V WL + C F V ++ P G ++ G+ S ++ ++ + A++ + +D + + L S LDGC +FL+G K KL+R ++ GG +++ V+HV+V + +++Q+++ + P VV+ +WL+ Sbjct: 103 KNLVISCTGVEKNERERLHNLVELMGGEVSRNFTQSVTHLVAGEVGSKKYLVAGGLSVAIMLPQWVDKVWEKSKQEYCHGSDPEFQAYKCPLFKDLVITVSGISNDERAEVKQVVEAQGGRYTGEMKINDCTHLIVNEPKGQKYEFAVKWKIHIVCLAWLFESVQNGYCMDENKFRVGNMHNAKTP----GTKKTSGQLPCITDMSNITNVS-----VTSNIDETAVITTNQTRMSHSNKSLIKEPESKDPLDDLDLSSRMGDAFLDGCKLFLSGFKSSQIEKLRR----IINTGGGTRFNQLNDNVSHVIVGEAV---EEHIKQIMEMKSRPHVVSCDWLV 428
BLAST of NO17G00230 vs. NCBI_GenBank
Match: XP_013420626.1 (DNA topoisomerase 2-binding protein 1 isoform X3 [Lingula anatina]) HSP 1 Score: 103.2 bits (256), Expect = 3.300e-18 Identity = 83/342 (24.27%), Postives = 152/342 (44.44%), Query Frame = 0 Query: 47 RKMTLSSTGFSEQTNINFRSLVEKHGGEFTTHFNVHVTALIASAVDTEKYRGAVKFGTPIVTRAWLD-------ASIAHGKAADFASYLLPPLYELKVTSTGFMPDEKREMREAVERLGGVYATDLEMDFTSFLIARRAEGEKYQAARKWNIRVVSRDWLQACERRKVCDSGEAFPVLPTSHSPPPLHKEGGREGRGKGGLARSHSIGPPIAQELPLLSHLVRPEALVHLAGGDRYEGGRXXXXXXXXEDDV-EAALPSLPSSMALDGCVVFLAG-KDRIATKLKRMLVLLVRKGGAALAPRVDSAVTHVLVAHVMFLTSSNVQQLVKHPTSPLVVTREWLL 380 + + +S TG + +LVE GGE + +F VT L+A V ++KY A I+ W+D HG +F +Y P +L +T +G DE+ E+++ VE GG Y +++++ + LI +G+KY+ A KW I +V WL + C F V ++ P G ++ G+ S ++ ++ + A++ + +D + + L S LDGC +FL+G K KL+R ++ GG +++ V+HV+V + +++Q+++ + P VV+ +WL+ Sbjct: 103 KNLVISCTGVEKNERERLHNLVELMGGEVSRNFTQSVTHLVAGEVGSKKYLVAGGLSVAIMLPQWVDKVWEKSKQEYCHGSDPEFQAYKCPLFKDLVITVSGISNDERAEVKQVVEAQGGRYTGEMKINDCTHLIVNEPKGQKYEFAVKWKIHIVCLAWLFESVQNGYCMDENKFRVGNMHNAKTP----GTKKTSGQLPCITDMSNITNVS-----VTSNIDETAVITTNQTRMSHSNKSLIKEPESKDPLDDLDLSSRMGDAFLDGCKLFLSGFKSSQIEKLRR----IINTGGGTRFNQLNDNVSHVIVGEAV---EEHIKQIMEMKSRPHVVSCDWLV 428 The following BLAST results are available for this feature:
BLAST of NO17G00230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G00230 ID=NO17G00230|Name=NO17G00230|organism=Nannochloropsis oceanica|type=gene|length=3778bpback to top protein sequence of NO17G00230.2 >NO17G00230.2-protein ID=NO17G00230.2-protein|Name=NO17G00230.2|organism=Nannochloropsis oceanica|type=polypeptide|length=556bpback to top protein sequence of NO17G00230.1 >NO17G00230.1-protein ID=NO17G00230.1-protein|Name=NO17G00230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=705bpback to top Synonyms
Publications
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