NO16G00480, NO16G00480 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G00480 vs. NCBI_GenBank
Match: XP_005856061.1 (ribulose- -bisphosphate carboxylase oxygenase small subunit n-methyltransferase i [Nannochloropsis gaditana CCMP526] >EKU20308.1 ribulose- -bisphosphate carboxylase oxygenase small subunit n-methyltransferase i [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 468.0 bits (1203), Expect = 3.100e-128 Identity = 238/313 (76.04%), Postives = 266/313 (84.98%), Query Frame = 0
Query: 88 TAKWSTSNKPTSGQEERDWKQALLEDDDLDIDAIIAANKEALPRLPGILNTGPQDSVTTDGAFDLPDSFADEAASKPEARGSEEGVGPL--RSKMQGLGGKGDDSDEKKKAQQNARLSAWLGENGVWMKDKSGWGVPPHPLLLSSKTIDEIELEDSGRGLICKYPINMGNALFQLPLSIVIDKQKALEAFNGALPDDINEYFAIALMLIKQRALGAASFWSPYIDVLPTAEEVNPTLIWAEEDLALLETSPLVAATKSLKRKLRAEFDMLKENYLVGRPDVFDEKVYDFDAYLWAFINIFSRAIRVSLEDKKG 399
T+K S++ P EERDWKQALLEDDDLDIDAIIAANKE LPRLPGILN P+ DG DLP+SF DEA + P+ EEGVGPL R+KMQGLGGKG+D +EKKKAQQNARL+ WLGENGVWM+DKSGWGVPPHPLLLSS+TIDEIELEDSGRGLICKYPINMGNALFQLPLSIVIDK+K+L AF+GALP DINEYFAIALMLIK+RALG +SFW+PYIDVLPT EEVNPTL+W E DLALLE SPLVAAT+SLKRKL AEF +L+E Y+ R DVFD V+ F+AYLWAFINIFSRAIRV + K+G
Sbjct: 7 TSKKSSAEAP----EERDWKQALLEDDDLDIDAIIAANKETLPRLPGILNASPR-----DGNVDLPESFLDEAVASPK---KEEGVGPLVSRAKMQGLGGKGEDDEEKKKAQQNARLATWLGENGVWMQDKSGWGVPPHPLLLSSRTIDEIELEDSGRGLICKYPINMGNALFQLPLSIVIDKEKSLAAFDGALPADINEYFAIALMLIKERALGPSSFWAPYIDVLPTTEEVNPTLVWPEGDLALLEASPLVAATRSLKRKLAAEFALLEEQYMRARSDVFDPSVFTFEAYLWAFINIFSRAIRVKIGGKRG 307
BLAST of NO16G00480 vs. NCBI_GenBank
Match: EWM24078.1 (ribulose- -bisphosphate carboxylase oxygenase small subunit n-methyltransferase i [Nannochloropsis gaditana]) HSP 1 Score: 468.0 bits (1203), Expect = 3.100e-128 Identity = 238/313 (76.04%), Postives = 266/313 (84.98%), Query Frame = 0
Query: 88 TAKWSTSNKPTSGQEERDWKQALLEDDDLDIDAIIAANKEALPRLPGILNTGPQDSVTTDGAFDLPDSFADEAASKPEARGSEEGVGPL--RSKMQGLGGKGDDSDEKKKAQQNARLSAWLGENGVWMKDKSGWGVPPHPLLLSSKTIDEIELEDSGRGLICKYPINMGNALFQLPLSIVIDKQKALEAFNGALPDDINEYFAIALMLIKQRALGAASFWSPYIDVLPTAEEVNPTLIWAEEDLALLETSPLVAATKSLKRKLRAEFDMLKENYLVGRPDVFDEKVYDFDAYLWAFINIFSRAIRVSLEDKKG 399
T+K S++ P EERDWKQALLEDDDLDIDAIIAANKE LPRLPGILN P+ DG DLP+SF DEA + P+ EEGVGPL R+KMQGLGGKG+D +EKKKAQQNARL+ WLGENGVWM+DKSGWGVPPHPLLLSS+TIDEIELEDSGRGLICKYPINMGNALFQLPLSIVIDK+K+L AF+GALP DINEYFAIALMLIK+RALG +SFW+PYIDVLPT EEVNPTL+W E DLALLE SPLVAAT+SLKRKL AEF +L+E Y+ R DVFD V+ F+AYLWAFINIFSRAIRV + K+G
Sbjct: 102 TSKKSSAEAP----EERDWKQALLEDDDLDIDAIIAANKETLPRLPGILNASPR-----DGNVDLPESFLDEAVASPK---KEEGVGPLVSRAKMQGLGGKGEDDEEKKKAQQNARLATWLGENGVWMQDKSGWGVPPHPLLLSSRTIDEIELEDSGRGLICKYPINMGNALFQLPLSIVIDKEKSLAAFDGALPADINEYFAIALMLIKERALGPSSFWAPYIDVLPTTEEVNPTLVWPEGDLALLEASPLVAATRSLKRKLAAEFALLEEQYMRARSDVFDPSVFTFEAYLWAFINIFSRAIRVKIGGKRG 402
BLAST of NO16G00480 vs. NCBI_GenBank
Match: CBJ29688.1 (putative ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit N-methyltransferase I [Ectocarpus siliculosus]) HSP 1 Score: 203.8 bits (517), Expect = 1.100e-48 Identity = 102/220 (46.36%), Postives = 149/220 (67.73%), Query Frame = 0
Query: 173 VGPLRSKMQGLGGKGDDSDEKKKAQQNARLSAWLGENGVWMKDKSGWGVPPHPLLLSSKTIDEIELEDSGRGLICKYPINMGNALFQLPLSIVIDKQKALEAFNG-ALPDDINEYFAIALMLIKQRALGAASFWSPYIDVLPTAEEVNPTLIWAEEDLALLETSPLVAATKSLKRKLRAEFDMLKENYLVGRPDVFDEKVYDFDAYLWAFINIFSRAIRV 392
+GP + KM GLGG +++ + A+ NA L W+GENGVW+ DKS WGV PH L ++ T+DE E E +GRG+I I G+ LF LP+ +++ K A + F + +D++EY AIAL+ + ++A G SFWS YI VLPT EEV PT +WAEEDLALLE SP++AAT+S++RKL E+ ++ + L P++ +V+ ++ + WAF +FSRAIR+
Sbjct: 67 LGPSK-KMSGLGGM--VAEDSRVAENNA-LKEWMGENGVWVYDKSDWGVGPHALSVAVDTVDENENETAGRGMIANREIKEGDELFTLPIDLLLTKDAAKKEFGADVITEDLSEYIAIALLAVHEKAKGKESFWSSYIGVLPTVEEVYPTYLWAEEDLALLEGSPVIAATESMRRKLEVEYATVENDLLDKFPEILPREVHTYEEFQWAFAMLFSRAIRL 282
BLAST of NO16G00480 vs. NCBI_GenBank
Match: CEL95601.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 191.8 bits (486), Expect = 4.300e-45 Identity = 110/277 (39.71%), Postives = 162/277 (58.48%), Query Frame = 0
Query: 121 IIAANKEALPRLPGILN--TGPQDSVTTDGAFDLPDSFADEAASKPEARGSEEGVG-PLRSKMQGLGGKGDDSDEKKKAQQNARLSAWLGENGVWMKDKSGWGVPPHPLLLSSKTIDEIELEDSGRGLICKYPINMGNALFQLPLSIVIDKQKALEAFNGALPDD-INEYFAIALMLIKQRALGAASFWSPYIDVLPTAEEVNPTLIWAEEDLALLETSPLVAATKSLKRKLRAEFDMLKENYLVGRPDVFDEKVYDFDAYLWAFINIFSRAIRVSL 394
++A ++ P + IL+ GP V G ++ D F D+ + + RG + G SK++GL G D K QQN L+ WL NGV++ +KS WG+ PH LL++ +DE E +GRGL+ K +++ + +PL + K A F + DD ++E+ AIAL+LI +RA G SF+ PY+DVLPT EEVNPT +W EED+ LL S SL+ KL E+D ++ L +P++F E V+ F+A+LWAFI IFSR+IR+ L
Sbjct: 46 LLAQSRPESPSVKDILSPLEGPLVEVVM-GERNVTDLFRDDRSLWEKTRGQTDRPGAATTSKLRGLRGLTSDD---IKVQQNEALAGWLFANGVYLSEKSEWGLAPHACLLATDVMDENAGESAGRGLLAKKQLDVNEEVLSVPLRLCFTKDAARRVFGPDIVDDGMSEHIAIALLLIHERAKGDDSFFFPYLDVLPTIEEVNPTFVWPEEDVELLRGSQAFITATSLREKLLNEYDRVRSLVLTKKPEMFPEDVFTFEAWLWAFIQIFSRSIRLQL 318
BLAST of NO16G00480 vs. NCBI_GenBank
Match: XP_009033030.1 (hypothetical protein AURANDRAFT_61181 [Aureococcus anophagefferens] >EGB11917.1 hypothetical protein AURANDRAFT_61181 [Aureococcus anophagefferens]) HSP 1 Score: 181.8 bits (460), Expect = 4.400e-42 Identity = 109/249 (43.78%), Postives = 149/249 (59.84%), Query Frame = 0
Query: 145 TTDGAFDLPDSFADEAASKPEARGSEEGVGPLRSKMQGLGGKGDDSDEKKKAQQNARLSAWLGENGVWMKDKSGWGVPPHPLLLSSKTIDEIELEDSGRGLICKYPINMGNALFQLPLSIVIDKQKALEA--FNGALPDDINEYFAIALMLIKQRALGAASFWSPYIDVLPTAEEVNPTLIWAEEDLALLETSPLVAATKSLKRKLRAEFDMLKENYLVGRPDVFDEKVYDFDAYLWAFINIFSRAIRV 392
TT A D DS+A E + A G+EE + L GK D ++A+ +A L AWL +N VW+ + SGW VPPH + L++ T DE+E EDSGRGL+ + I L +LP+ + + K AL+A G+L DD NEY AIAL+LI +R+ G+ SFWS YI +LPT E+V T W E+LA LE SP +AT S+ KLRAE + E D +++ F+A+ WAF N+FSRAIR+
Sbjct: 35 TTLAASD--DSWAVEL--QQAAGGAEE-----KEAASWLKGKNAGVDGGERARNDA-LMAWLTDNDVWVSELSGWNVPPHSMALATTTFDELEGEDSGRGLLARRAITQDAELIRLPVRLCMTKASALKARELRGSLNDDTNEYIAIALLLILERSKGSRSFWSEYIAILPTNEDVGATFTWPAEELAYLEGSPAASATASMMAKLRAEHAAVLEG-----NSALDPEIFTFEAWQWAFTNLFSRAIRL 268
BLAST of NO16G00480 vs. NCBI_GenBank
Match: GAX18704.1 (hypothetical protein FisN_10Hh082 [Fistulifera solaris]) HSP 1 Score: 181.4 bits (459), Expect = 5.800e-42 Identity = 98/219 (44.75%), Postives = 142/219 (64.84%), Query Frame = 0
Query: 179 KMQGLGGKGDDSDEKKKAQQNARLSAWLGENG-VWMKDKSGWGVPPHPLLLSSKTIDEIELEDSGRGLICKYPINMGNALFQLPLSIVIDKQKALEAF-NGALPDDINEYFAIALMLIKQR-ALGAASFWSPYIDVLPTAEEVNPTLIWAEEDLALLETSPLVAATKSLKRKLRAEFDML--KENYLVGR-PDVFDEKVYDFDAYLWAFINIFSRAIRV 392
KM+GL G D K A NA L WL + G V++ ++S WG PHP+ +S+ T DEI E SGRGL+ + IN G+ L ++P+ + + K A +A ALP +INEY AIA LI ++ + S+W PY+DVLPT +EV+PT W+++DLA L+ SP++AATKSL+ KL+ E+D L +N L+ R PD F ++ + + + WAF +FSRAIR+
Sbjct: 33 KMKGLMKGGSQGDVKLSA--NANLIQWLSKEGDVYLSEQSSWGEAPHPMAISTDTKDEITNESSGRGLLARRDINDGDELLKIPMKMCMTKSNARKALGKDALPSEINEYLAIACHLIYEKFVMADQSYWKPYLDVLPTTDEVSPTFTWSDDDLAFLKGSPVIAATKSLQMKLKREYDALLGGDNGLIARFPDRFPKEHFTMENWTWAFTMLFSRAIRL 249
BLAST of NO16G00480 vs. NCBI_GenBank
Match: GAX17228.1 (hypothetical protein FisN_10Lh082 [Fistulifera solaris]) HSP 1 Score: 180.3 bits (456), Expect = 1.300e-41 Identity = 99/219 (45.21%), Postives = 141/219 (64.38%), Query Frame = 0
Query: 179 KMQGLGGKGDDSDEKKKAQQNARLSAWLGENG-VWMKDKSGWGVPPHPLLLSSKTIDEIELEDSGRGLICKYPINMGNALFQLPLSIVIDKQKALEAF-NGALPDDINEYFAIALMLIKQR-ALGAASFWSPYIDVLPTAEEVNPTLIWAEEDLALLETSPLVAATKSLKRKLRAEFDML--KENYLVGR-PDVFDEKVYDFDAYLWAFINIFSRAIRV 392
KM+GL G D K A NA L WL + G V++ ++S WG PHP+ +S+ T DEI E SGRGL+ + IN G+ L ++P+ + + K A +A ALP +INEY AIA LI ++ + S+W PY+DVLPT EV+PT W+E+DLA LE SP++AATKSL+ KL+ E+D L +N LV + P+ F ++ + + + WAF +FSRAIR+
Sbjct: 33 KMKGLMKGGSQGDVKLSA--NANLVQWLSKEGDVYLSEQSSWGEAPHPMAISTDTKDEITNESSGRGLLARRDINDGDELLKIPMKMCMTKANARKALGKDALPSEINEYLAIACHLIFEKFVMADQSYWKPYLDVLPTVNEVSPTFTWSEDDLAFLEGSPVIAATKSLQMKLKREYDALLGGDNGLVAKFPERFPKEHFTLENWTWAFTMLFSRAIRL 249
BLAST of NO16G00480 vs. NCBI_GenBank
Match: XP_002286075.1 (rubisco small subunit small subunit n-methyltransferase, partial [Thalassiosira pseudonana CCMP1335] >EED95716.1 rubisco small subunit small subunit n-methyltransferase, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 179.5 bits (454), Expect = 2.200e-41 Identity = 93/199 (46.73%), Postives = 131/199 (65.83%), Query Frame = 0
Query: 199 NARLSAWL-GENGVWMKDKSGWGVPPHPLLLSSKTIDEIELEDSGRGLICKYPINMGNALFQLPLSIVIDKQKALEAF-NGALPDDINEYFAIALMLIKQR-ALGAASFWSPYIDVLPTAEEVNPTLIWAEEDLALLETSPLVAATKSLKRKLRAEFDML---KENYLVGRPDVFDEKVYDFDAYLWAFINIFSRAIRV 392
N+RL AWL E GV++ + S WG PHPL +S++T+DEI E SGRGL+ + IN G+ L ++P+ + I ++ A +A AL D INEY AIA LI ++ LG S W Y+ VLP EEVNPT W +EDLA L+ SP+VAAT+SL+ KLR E+D L ++ + PD F + + ++ ++WAF +FSRAIR+
Sbjct: 1 NSRLIAWLESEGGVYLAESSTWGEAPHPLAISTETVDEITNESSGRGLLARRSINDGDELLKIPMDLCITRKSARKALGKDALQDGINEYLAIACQLIHEKYVLGDESEWDAYMGVLPEVEEVNPTFTWKDEDLAFLDGSPVVAATRSLQMKLRREYDALLGGQDGLIAKFPDRFPAEHFTYENWVWAFTMLFSRAIRL 199
BLAST of NO16G00480 vs. NCBI_GenBank
Match: XP_002185762.1 (ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit N-methyltransferase I [Phaeodactylum tricornutum CCAP 1055/1] >ACI65232.1 ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit N-methyltransferase I [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 176.8 bits (447), Expect = 1.400e-40 Identity = 100/240 (41.67%), Postives = 141/240 (58.75%), Query Frame = 0
Query: 158 DEAASKPEARGSEEGVGPLRSKMQGLGGKGDDSDEKKKAQQNARLSAWL-GENGVWMKDKSGWGVPPHPLLLSSKTIDEIELEDSGRGLICKYPINMGNALFQLPLSIVIDKQKALEAF-NGALPDDINEYFAIALMLIKQRAL-GAASFWSPYIDVLPTAEEVNPTLIWAEEDLALLETSPLVAATKSLKRKLRAEFDML---KENYLVGRPDVFDEKVYDFDAYLWAFINIFSRAIRV 392
D SK S + +M+ G + +D K N L WL E V++ ++S WG PHPL +S++T DEI E SGRGL+ + IN G+ L ++P+++ + K A +A LP +INEY A+A LI +R + G S W PY+DVLP +EVNPT W +EDLA L SP++AATKSL+ KLR E+D L ++ L PD F + ++F A+ WAF +FSRAIR+
Sbjct: 41 DSEWSKALLENSGSQIDAFNKEMKLKGLMPEKNDANPKFTANTNLIQWLTTEGNVYLSEESSWGEAPHPLAISTETKDEITNESSGRGLLARRDINDGDELLRIPMALCMTKSAARKAVGKDVLPSEINEYLAMACHLIYERNVRGEESPWKPYLDVLPDIDEVNPTFTWPDEDLAFLNGSPVIAATKSLQMKLRREYDALLGGEDGLLAKYPDRFPAEAFNFKAWEWAFTMLFSRAIRL 280
BLAST of NO16G00480 vs. NCBI_GenBank
Match: OEU18174.1 (ribulose-1,5-bisphosphate caboxylase, small subunit [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 176.8 bits (447), Expect = 1.400e-40 Identity = 101/233 (43.35%), Postives = 143/233 (61.37%), Query Frame = 0
Query: 165 EARGSEEGVGPLRSKMQGLGGKGDDSDEKKKAQQNARLSAWLG-ENGVWMKDKSGWGVPPHPLLLSSKTIDEIELEDSGRGLICKYPINMGNALFQLPLSIVIDKQKALEAF-NGALPDDINEYFAIALMLIKQR-ALGAASFWSPYIDVLPTAEEVNPTLIWAEEDLALLETSPLVAATKSLKRKLRAEFDML---KENYLVGRPDVFDEKVYDFDAYLWAFINIFSRAIRV 392
E+ + GV KM+GL GK ++ K A NARL +WL E GV++ ++S WG PHP+ +S++T DEI E SGRGL+ + IN G+ L ++P+ + + K A A LP +INEY A+A LI +R LG SF+ PYIDVLP EEVNPT W+++DL+ L SP++AAT+SL+ KL+ E+D L + P F + Y + + WAF +FSRAIR+
Sbjct: 61 ESTAAIPGVFEEEMKMKGLLGKKTGANPKLTA--NARLVSWLSEEGGVYLSEESTWGEAPHPMAISTETKDEITNESSGRGLLARRDINDGDNLLKVPIKLCLTKSSARTALGKDVLPSEINEYLAVACQLIHERYVLGDKSFFKPYIDVLPETEEVNPTFTWSDDDLSFLNGSPVIAATQSLQMKLQREYDSLLGGDDGLCNKYPSRFPIEHYTMENWTWAFAMLFSRAIRL 291 The following BLAST results are available for this feature:
BLAST of NO16G00480 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G00480 ID=NO16G00480|Name=NO16G00480|organism=Nannochloropsis oceanica|type=gene|length=1544bpback to top protein sequence of NO16G00480.1 >NO16G00480.1-protein ID=NO16G00480.1-protein|Name=NO16G00480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=422bpback to top Synonyms
Publications
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