jgi.p|Nanoce1779_2|529819, gene_5923 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|529819
Unique Namegene_5923
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_14:77916..80531 +

Link to JBrowse

Properties
Property NameValue
TranscriptId529905
ProteinId529819
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_14supercontigscaffold_14:77916..80531 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0018024histone-lysine N-methyltransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL018ncniL018Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO16G00480NO16G00480Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|529819mRNA_5923-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|529819mRNA_5923Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|529819

>mRNA_5923-protein ID=mRNA_5923-protein|Name=jgi.p|Nanoce1779_2|529819|organism=Nannochloropsis oceanica|type=polypeptide|length=535bp
MLPPGVDAFVIRPSSGPSSSSCSSTTSIRPSSFSSGGNPTAKWSTSNKPT
SGQEERDWKQALLEDDDLDIDAIIAANKEMQGLGGKGDDSDEKKKAQQNA
RLSAWLGENGVWMKDKSGWGVPPHPLLLSSKTIDEIELEDSGRGLICKYP
INMGNALFQLPLSIVIDKQKALEAFNGALPDDINEYFAIALMLIKQRALG
AASFWSPYIDVLPTAEEVNPTLIWAEEDLALLETSPLVAATKSLKRKLRA
EFDMLKENYMLGRPDVFDEKVYDFDAYLWAFINIFSRAIRDGAGETIIMC
PYADLINHNPFANTYIVAEKPFKMFNPIRGEEVITIYADKDYRKMEQVYI
SYGPKSNADLLLLYGFCLDRNPYNSVEITVSLLEQDPLFDDKRVFLSQVD
RREKEAFPLFADRYPNELFEYLRLVYLTPEDIQGKKLSDMDFTDPISLEN
ELAAMASIESACEDALASYSTKEEDDARLINDGKLFNMFPKTQRMAIKHR
RSEKRLLKKTAAAVKQQLLNLKSGKRKLRPEEED*
back to top
Synonyms
Publications