NO16G00150, NO16G00150 (gene) Nannochloropsis oceanica

Overview
NameNO16G00150
Unique NameNO16G00150
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2255
Alignment locationchr16:53099..55353 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:53099..55353 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
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BLAST of NO16G00150 vs. NCBI_GenBank
Match: EWM22821.1 (hypothetical protein Naga_100375g4 [Nannochloropsis gaditana])

HSP 1 Score: 401.4 bits (1030), Expect = 2.900e-108
Identity = 209/339 (61.65%), Postives = 255/339 (75.22%), Query Frame = 0 
Query:    1 MGQSWRRPESEPRIGKLECFVERARNLNPQSIEVVKDWPNCNAFLVFSLRLSRFHRAESSRKIAMQNELPQTAPIWREKVAEWNDVPYPPKNKVSITLAYEKDKNTDAVAGGYYGMHSKEWTVQQGVSPVVSPAYAWRGLRS-KPSAXXXXXXXXXXXXXXXXXTRIGHREYRGEVKVAIRWSQTEPEFRPYVHLLSHCVARTQAICRPLYRLADPLVASLLDVFVLSMCVDVWYKGMLLPAYAFLTQNRSILLAAFLACFLPLALLWVPALVFFPITLLMFWGSFLLFLCLTPVGCALVWFLLASEPAQSKLLRPFLQICLKTKGVRGWFTLPCSPYS 339
            MGQ+WRRPE EPR+GK E F+ERARNLNPQ++E VKDW NC+AF +F+L  S  HRAESSRK A++  L QTAPIW+EKVAEW DV YP   + +ITL YEK+    AV+ G+Y     EWT+Q G+ PV  P Y WRGLRS +PS+      XXXXXXXXXX T++GHRE+RGEVK AIRWSQTEPE+R YV  LS+CV+RTQA+ +PL    DP++ + LD+FVLS+ V+ W+K ML+PA+ FLTQNRS+++AA     LP  LLWVPALVFFPITLL+FW SF   LCLTP+GCALVW LLAS+P Q +L+RP  Q CL +   R W TLP SPYS
Sbjct:    1 MGQAWRRPEGEPRVGKAELFIERARNLNPQAVERVKDWVNCDAFFIFNLGRSEAHRAESSRKNAVEYGLIQTAPIWQEKVAEWQDVLYPSPVQATITLVYEKENKKQAVS-GFYNFRGHEWTLQHGLGPVFPPVYHWRGLRSVRPSS---SQAXXXXXXXXXXPTKLGHREFRGEVKAAIRWSQTEPEYRGYVLFLSYCVSRTQALLQPLQPFLDPVLGTFLDIFVLSVFVEGWWKRMLVPAWTFLTQNRSVVVAAASVFLLPFLLLWVPALVFFPITLLIFWVSFFSLLCLTPIGCALVWLLLASKPVQGRLVRPIFQACLASPACRRWLTLPRSPYS 335
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BLAST of NO16G00150 vs. NCBI_GenBank
Match: EWM28204.1 (lipid droplet surface protein [Nannochloropsis gaditana])

HSP 1 Score: 90.5 bits (223), Expect = 1.100e-14
Identity = 95/322 (29.50%), Postives = 143/322 (44.41%), Query Frame = 0 
Query:   10 SEPR--IGKLECFVERARNLNPQSIEVVKDWPNCNAFLVFSLRLSRFHRAESSRKIAMQNELPQTAPIWREKVAEWNDVPYPPKNKVSITLAYEKDKNTDAVAGGYYGMHSKEWTVQQGVSPVVSPAYAWRGLRSKPSAXXXXXXXXXXXXXXXXXTRIGHREYRGEVKVAIRWSQTEPEFRPYVHLLSHCVARTQAICRPLYRLADPLVASLLDVFVLSMCVDVWYKGMLLPAYAFLTQNRSILLAAFLACFLPLA--LLWVPALVFFPITLLMFWGSFLLFLCLTPVGCALVWFLLASEPAQSKLLRPFLQICLKTKGVR 328
            S PR  +G+L   + RARNL    I  +      N  +VF+       R ESS K+   N++   AP W E+V  ++ VPYPP +K+SIT+ Y   K  + +     G  S  WT   G +P   P   W  + +K                           Y GE+   I W++TE ++RP V LL   V +TQ   RPL    +  +A    +      V    +GM        TQ R  +  A LA  L      L VPA++F P+TL++  G F       PV  + +W L+ ++P QSK++ P ++  L+ + V+
Sbjct:   17 SMPRSTMGRLRVRLNRARNLKGPEILGMS-----NCLVVFTY---EGKREESSVKV---NDI---APAWHEEVT-FDKVPYPPSSKISITIVYRSGKTDEVLGVACPG--SNLWTT--GNAP---PQDRWLPIATKEGI------------------------YAGELNFHIHWTKTEVQYRPAVRLLQRGVLKTQEFTRPLEPALERAMALTSGI---GSTVSRKIEGM------GRTQKR--VTGAVLAAVLASGGFFLVVPAILFLPVTLILLGGFFFCSFLALPVLTSFMWVLVCTKPVQSKVIGPLVERLLRYETVK 281
The following BLAST results are available for this feature:
BLAST of NO16G00150 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 2
Match NameE-valueIdentityDescription
EWM22821.12.900e-10861.65hypothetical protein Naga_100375g4 [Nannochloropsi... [more]
EWM28204.11.100e-1429.50lipid droplet surface protein [Nannochloropsis gad... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR089ncniR089Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR058ngnoR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G00150.2NO16G00150.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO16G00150.1NO16G00150.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100375g4gene7627Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G00150.2NO16G00150.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO16G00150.1NO16G00150.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G00150 ID=NO16G00150|Name=NO16G00150|organism=Nannochloropsis oceanica|type=gene|length=2255bp
ACAGTAGTAGAATGGGTCAGTCATGGCGGCGACCGGAGAGTGAGCCGCGC
ATCGGCAAGTTGGAGTGTTTCGTAGAACGAGCTAGAAATCTCAACCCTCA
GAGCATCGAGGTAAAAGGGGGAAAGGAAGAGGAAGAGTAGTCAAGAAAAA
CTGGTGGCAGGGCCGGTAAAAAGATGTAGGTGGGACACATACGTAGGATG
TGTGTCTCGACGTTGGTGTGAGGCTGTGCTTAGCCAACCCGCATTGTCCT
GAACGGCTACCATTCTCCTTTCTCCCTTCCCCACCCGGACAGGTGGTCAA
AGACTGGCCGAACTGCAACGCCTTCCTAGTCTTCTCCCTGAGGCTTTCAC
GGTTCCATCGGGCGGAAAGCAGTCGGAAAATTgtacgtgggtggatggga
gggaggacgagaggaaagtggaagcgagcctgctcgtccttgcccacttg
cccatgcttatagggcgagaaagaattaagtgtatgacctccacgcactc
acacttctcctcctttacgacacctgcacgacgtgttacttacagGCTAT
GCAGAATGAGCTACCGCAGACAGCGCCCATATGGCGAGAAAAGGTGGCGG
AATGGAACGATGTACCGTACCCGCCTAAGTACGAACGGGAAGGGAGAGGG
AGGGAGTGAGGAAGTAGGATTTTAATCTCGTGCTGCTGGCATTTAACTGA
ATTTTCGGGGAAGAGATATCTTGTGTGCATTGAACGACATGTCTCATAAC
TCCGGACTTGCTCCTCTTCCATCTCAGCCACCAGTCACTTACTGTCCTCC
CTCCCTCCCTCCCCTCCTTCCTCTCTCTCTCCCCTTGGTCCCTCCCCCTC
GTCCCAGAAATAAAGTGAGCATTACCCTAGCGTACGAGAAGGACAAGAAC
ACAGACGCTGTCGCGGGCGGCTACTACGGCATGCATAGCAAGGAATGGAC
AGTGCAACAAGgtagggagggagggagggagggagagaaagatggatgga
cgtaaggacaaagaagaagactttctttcaagcggttcggcggagatact
cattaagccttccttcccaccctccctgttaccctccttcccgcgctcct
ttggacagGCGTCAGTCCTGTGGTCAGCCCGGCCTACGCCTGGCGGGGTT
TGCGTTCCAAGCCCTCGGCCTCGAGCACCTCCGCCCCCTCCTCCCCCTCC
TCCACCGCCTCCCCTTCTCCGACCAGGATCGGGCATAGAGAGTACCGGGG
CGAGGTCAAGGTCGCCATTCGATGgtgcgtatccccgtcctccctcccgc
ccttcctcctctcagcctttcttcatacgctccccccccctccctccctc
cctccctcagGAGCCAAACGGAGCCTGAGTTCCGGCCCTACGTCCACTTA
CTCTCCCACTGCGTCGCGCGCACCCAAGCCATCTGCAGGCCCCTCTACCG
CCTCGCTGACCCCCTCGTCGCCTCCCTCCTCGACGTCTTTGTCCTTTCCA
TGTGTGTCGACGTTTGGTACAAGGGCATGCTGCTCCCCGCCTATGCCTTC
TTGACTCAGAACAGGTCTATCCTGCTGGCTGCGTTCTTGGCATGTTTCCT
CCCTCTTGCCCTCCTCTGGGTTCCTGCCTTGGTCTTCTTCCCCATTACGC
TGCTTATGTTTTGGgtgagaagggagggaaggaagggggggagggaggga
gggagggagggagggagaaaggggggagtgttttcaggaaattcgctttt
tgaattttccatttttacactcatcttccaaatccacccacccatccccc
cctcccgcttatttcagGGCTCCTTCCTCCTCTTCCTCTGCCTCACCCCC
GTCGGCTGTGCCTTGGTATGGTTCCTCCTCGCCTCGGAACCTGCTCAGTC
CAAGCTCCTGCGCCCCTTCCTCCAGATATGCCTGAAAACAAAGGGTGTGA
GAGGATGGTTTACTCTGCCTTGCTCTCCGTACAGCCCTTGAGGGGGAGGG
CAATAAGGAGTCAAGCGGTGAGGGAGAAAGAGGGGAGGCGGAGGACACAG
AAATCTTGAAGGTAGAGAGGTTGGGAGGGGGGGAGAAAGGGAGGATAAGA
CAGAGGGAAGGACAGACGGTTGTTGTTAAAGTACTCGTATTTTTCTCTAC
GTGTGTTAAAAGGCAGGGAGGAAGGGAAGGAATGAAGGAGGGAAAGTCAA
TACGACATTTTTGTGTACGTTACGATAAAACAAAAGGAAAAATAGGAATG
ACAAA
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protein sequence of NO16G00150.2

>NO16G00150.2-protein ID=NO16G00150.2-protein|Name=NO16G00150.2|organism=Nannochloropsis oceanica|type=polypeptide|length=289bp
MSHNSGLAPLPSQPPVTYCPPSLPPLLPLSLPLVPPPRPRNKVSITLAYE
KDKNTDAVAGGYYGMHSKEWTVQQGVSPVVSPAYAWRGLRSKPSASSTSA
PSSPSSTASPSPTRIGHREYRGEVKVAIRWSQTEPEFRPYVHLLSHCVAR
TQAICRPLYRLADPLVASLLDVFVLSMCVDVWYKGMLLPAYAFLTQNRSI
LLAAFLACFLPLALLWVPALVFFPITLLMFWGSFLLFLCLTPVGCALVWF
LLASEPAQSKLLRPFLQICLKTKGVRGWFTLPCSPYSP*
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protein sequence of NO16G00150.1

>NO16G00150.1-protein ID=NO16G00150.1-protein|Name=NO16G00150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=340bp
MGQSWRRPESEPRIGKLECFVERARNLNPQSIEVVKDWPNCNAFLVFSLR
LSRFHRAESSRKIAMQNELPQTAPIWREKVAEWNDVPYPPKNKVSITLAY
EKDKNTDAVAGGYYGMHSKEWTVQQGVSPVVSPAYAWRGLRSKPSASSTS
APSSPSSTASPSPTRIGHREYRGEVKVAIRWSQTEPEFRPYVHLLSHCVA
RTQAICRPLYRLADPLVASLLDVFVLSMCVDVWYKGMLLPAYAFLTQNRS
ILLAAFLACFLPLALLWVPALVFFPITLLMFWGSFLLFLCLTPVGCALVW
FLLASEPAQSKLLRPFLQICLKTKGVRGWFTLPCSPYSP*
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Synonyms
Publications