NO15G02470, NO15G02470 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO15G02470 vs. NCBI_GenBank
Match: EWM22326.1 (DNA-binding SAP [Nannochloropsis gaditana]) HSP 1 Score: 144.4 bits (363), Expect = 5.100e-31 Identity = 155/248 (62.50%), Postives = 169/248 (68.15%), Query Frame = 0
Query: 23 PVKQRFNKGKFKSFNRGRSYVSSEEDMERRDRFEGWKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQETVEGLTRKERDEAAKEKAREDYLRKYREGETDQARKDLARLAEVRAXXXXXXXXXXXXXXXXXXXXXXXXXGAAALE-GGGEGPGGFEKLDPREIKKMNGPKLKECLKERGLSTQGQKKELMDRL 270
P KQ+ NKGKFK F+R +YV+SEEDMERRDRFE WK XXX XXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXX +TRKER+EAA+EKARE+YLR+YREGET++A+KDLARLAEV XXXXXXXXXXXXXXX GA A E G GEG E LDPREIKKM+G KLKECLKERGLSTQGQKKEL+DRL
Sbjct: 57 PAKQQINKGKFKRFSRSHNYVTSEEDMERRDRFEDWK-----QRKKGGDXXXVAEGXXXXXXXXXXXXXXXXXXXXXXXEDGAGGMAEAFKKKVQVRDLPPAESGSEEXXXXXXXXXXXXXXXXXXXMTRKEREEAAREKAREEYLRRYREGETEEAKKDLARLAEVXXXXXXXXXXXXXXXXXREALNERLRLGAEAAEAGAGEGGKAIEALDPREIKKMSGTKLKECLKERGLSTQGQKKELVDRL 299
BLAST of NO15G02470 vs. NCBI_GenBank
Match: CCI50250.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 70.9 bits (172), Expect = 7.200e-9 Identity = 52/124 (41.94%), Postives = 68/124 (54.84%), Query Frame = 0
Query: 150 LTRKERDEAAKEKAREDYLRKYREGETDQARKDLARLAEVRAXXXXXXXXXXXXXXXXXXXXXXXXXGAAALEGG---GEGPGGFEKLDPREIKKMNGPKLKECLKERGLSTQGQKKELMDRLV 271
LTRKER+ KE+A +Y+R++ GET +A+KDLARLAEVR AAA++ + E LD R IK + LK+ LKERGLSTQGQKK+L+ RL+
Sbjct: 133 LTRKEREAIDKERAASEYMRRHLAGETTEAKKDLARLAEVR-----------KRREVAELRRKETEEAAAAMQAKLTVNDTDETEEVLDARSIKALKPAILKDKLKERGLSTQGQKKDLVQRLI 245
BLAST of NO15G02470 vs. NCBI_GenBank
Match: CCA26306.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 68.6 bits (166), Expect = 3.600e-8 Identity = 49/121 (40.50%), Postives = 62/121 (51.24%), Query Frame = 0
Query: 150 LTRKERDEAAKEKAREDYLRKYREGETDQARKDLARLAEVRAXXXXXXXXXXXXXXXXXXXXXXXXXGAAALEGGGEGPGGFEKLDPREIKKMNGPKLKECLKERGLSTQGQKKELMDRLV 271
LTRKER+ E+A +Y+R++ GET +A+KDLARLAEVR E E LD R IK + LK+ LKERGLSTQGQKK+L+ RL+
Sbjct: 135 LTRKEREAIDHERAASEYMRRHLAGETTEAKKDLARLAEVRRRREVAEIRRK------------------------ETEEAEEVLDARAIKALKPAVLKDKLKERGLSTQGQKKDLVQRLI 231
BLAST of NO15G02470 vs. NCBI_GenBank
Match: CCA24820.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 65.5 bits (158), Expect = 3.000e-7 Identity = 60/121 (49.59%), Postives = 74/121 (61.16%), Query Frame = 0
Query: 150 LTRKERDEAAKEKAREDYLRKYREGETDQARKDLARLAEVRAXXXXXXXXXXXXXXXXXXXXXXXXXGAAALEGGGEGPGGFEKLDPREIKKMNGPKLKECLKERGLSTQGQKKELMDRLV 271
LTRKER+ E+A +Y+R++ GET +A+KDLARLAEVR XXXXXXXXXXXXX + LD R IK + LK+ LKERGLSTQGQKK+L+ RL+
Sbjct: 135 LTRKEREAIDHERAASEYMRRHLAGETTEAKKDLARLAEVRRRREVAXXXXXXXXXXXXXLRAKLVI--------NDTXXXXXVLDARAIKALKPAVLKDKLKERGLSTQGQKKDLVQRLI 247
BLAST of NO15G02470 vs. NCBI_GenBank
Match: XP_024572035.1 (28 kda heat-and acid-stable phospho [Plasmopara halstedii] >CEG35666.1 28 kda heat-and acid-stable phospho [Plasmopara halstedii]) HSP 1 Score: 65.5 bits (158), Expect = 3.000e-7 Identity = 68/123 (55.28%), Postives = 80/123 (65.04%), Query Frame = 0
Query: 150 LTRKERDEAAKEKAREDYLRKYREGETDQARKDLARLAEVRAXXXXXXXXXXXXXXXXXXXXXXXXXGAAALEGGGEGPGGFEKLDPREIKKMNGPKLKECLKERGLSTQGQKKELMDRLVAF 273
L+R+ER+ KE+A YL+K+ GETD+A+KDLARLAEV XXXXXXXXXXXXXXXXXXX E LD R IK + LKE LKER LSTQGQKKEL+ RL+ +
Sbjct: 119 LSRREREAIEKERAAAYYLKKHLAGETDEAKKDLARLAEV--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPLDARAIKALKPAVLKEKLKERDLSTQGQKKELIQRLIDY 233
BLAST of NO15G02470 vs. NCBI_GenBank
Match: POM60059.1 (hypothetical protein PHPALM_31127 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 65.5 bits (158), Expect = 3.000e-7 Identity = 72/123 (58.54%), Postives = 86/123 (69.92%), Query Frame = 0
Query: 150 LTRKERDEAAKEKAREDYLRKYREGETDQARKDLARLAEVRAXXXXXXXXXXXXXXXXXXXXXXXXXGAAALEGGGEGPGGFEKLDPREIKKMNGPKLKECLKERGLSTQGQKKELMDRLVAF 273
L+R+ER+ KE+A Y++K+ GETD+A+KDLARLAE XXXXXXXXXXXXXXXXXXXXXXXXX + E LD R IK + LKE LKER LSTQGQKKEL+ RL+ +
Sbjct: 142 LSRREREAIEKERAAAYYMKKHLAGETDEAKKDLARLAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNDD--------EPLDARAIKALKPAVLKEKLKERNLSTQGQKKELIQRLIDY 256
BLAST of NO15G02470 vs. NCBI_GenBank
Match: POM76267.1 (hypothetical protein PHPALM_6513 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 65.5 bits (158), Expect = 3.000e-7 Identity = 72/123 (58.54%), Postives = 86/123 (69.92%), Query Frame = 0
Query: 150 LTRKERDEAAKEKAREDYLRKYREGETDQARKDLARLAEVRAXXXXXXXXXXXXXXXXXXXXXXXXXGAAALEGGGEGPGGFEKLDPREIKKMNGPKLKECLKERGLSTQGQKKELMDRLVAF 273
L+R+ER+ KE+A Y++K+ GETD+A+KDLARLAE XXXXXXXXXXXXXXXXXXXXXXXXX + E LD R IK + LKE LKER LSTQGQKKEL+ RL+ +
Sbjct: 142 LSRREREAIEKERAAAYYMKKHLAGETDEAKKDLARLAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNDD--------EPLDARAIKALKPAVLKEKLKERNLSTQGQKKELIQRLIDY 256 The following BLAST results are available for this feature:
BLAST of NO15G02470 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 7
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO15G02470 ID=NO15G02470|Name=NO15G02470|organism=Nannochloropsis oceanica|type=gene|length=2067bpback to top protein sequence of NO15G02470.1 >NO15G02470.1-protein ID=NO15G02470.1-protein|Name=NO15G02470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=277bpback to top Synonyms
Publications
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