NO15G01350, NO15G01350 (gene) Nannochloropsis oceanica

Overview
NameNO15G01350
Unique NameNO15G01350
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3979
Alignment locationchr15:378832..382810 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:378832..382810 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
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BLAST of NO15G01350 vs. NCBI_GenBank
Match: EWM22499.1 (hypothetical protein Naga_100011g56 [Nannochloropsis gaditana])

HSP 1 Score: 906.0 bits (2340), Expect = 1.400e-259
Identity = 659/1324 (49.77%), Postives = 788/1324 (59.52%), Query Frame = 0 
Query:    1 MSRVSWQAHGLKTLKVNPSPYSYAKDEEAREDNPPVDGQSQPDGEFLCTAGPLGLFVALIAAQEGGQVESGRLVFVPNEILQPRLLETAQENGLWDQPYGVPLPVGREAAMLAASWDGQYVAVAYLPAEKGGSTSDVEVYHVGDLRVQDGRPRASATVQLPLRTLRWTQTGRHRLMLGGGQSLMFLCGDSGDGSFVTMPIRDLSGPLAAADWSPSSDEVIVVSCFGEGPVEGGVESLFDAYFQTACTLTLETALDGEVISRLPTGIRHWEDPPGIDVEEPEFSADRNNVVHLAWLHPDVLVGLNRRGDVGLLALESAPLEGFAPSGLAPMEVPTMESRFYSVLMTDKNSGSSKKNDDNDVKFLFVTHSLDRYVHTADLTKPVDSDPNIKTGQRRARPLEPAAAEEGLPLVLAEGEVSALVPAKQRVCGLGLLTSKTALGAKAYAREEYRPLLVAAGVGGYAFLFALQDGGDLQAEQRLLKDPPNEPTAPPRAAAAXXXXXXXXXXXXXVFGATXXXXXFGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPISGTVSNFSNPLGGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISSTG---AFLFSG----ITPAASAPVPSIPFSAPLKPSITSSTSSSFGFGGLNSQKAPVTAATAXXXXXXXXXXXXXXXXXXXXXXXXHLPADGSXXXXXXXXXXXXXXXXXXXXXFGGEDEEKRGREILEADKEKDQEDATLARQRLASIPPFLSMTGERGKS-----SVXXXXXXXXXXXXXXPEQMFAELLELVEHRQHAGDGEVAGKLAAIKASGEAMDRREAVRELKHWAWELLDRVQLFEAEVGDLENRTRTLYGKQLELARKLRLVGLMVEQEEARRREGEGEEGRQEGREMRPWEADFLDAFASVERETLVEDVEELARAIARMLARGPHSGSSNCSILLSPQGGKGK----YRQALRERHGQLQRRRSA---EGGAVGGSGIKEWVGSQAEAQLRDDVMRELQAVWAEKDALWQLLGSDPEKGLYLEKARVQRRQQDRWRETPKKVSGRGGRYSVD------DGEEEGEEREVEEYGGSALALRGSDGVSGIGGK-AGRRTSHQPPLAAHGRGR----EVLREARRVAMLLGRVREELVGEEEVDVKISDLGIGGAAALESLRKKREERLKENKRKTAMQVRTAIVSTA-------NPAPSTTQPSYGASTSVFSAAPPPALSGGGDGAMDRKDGSSSWNSMSGSTSSTSPPSRGPGPQLPPTVGAVGAG 1288
            MS +SWQAH ++ L+V  SPY+ A++EEARE+ P +DGQ   DGE LC AGP GLF+A +++ +   V S RLVF+PNE L   +  +A ++GL ++PY V L   RE  +LA+S DGQYVAVAY P ++  S++DV++YHV DLR  D RPRAS TV   LR LRWT+TGR+RL+LGGG+SL  LCGDS DG+F     RDL   LAAADWSP+ DEV+VVSCFG+   EG VESLFD YF +  +LTL+ AL G+V+S L TG+RHWEDP  ID E+PEF ADR+N+VHLAWLHPDVLVGLNRRGD+GLLA+ SAP  GF+PSGLAPM+VPTMESRF++ LM    S +   ND + V++LFV  SLD YV TADLTKP++ DP+ KTGQRR RPLEPAA EEGLPLVL +GE + +VP+KQRVCGL +LT KT LGAK +A E+YRPLLVAAGVGGYAF FALQDGGD +AEQ+L+ D P    AP R                    A      F                XXXXXXXXXX                   F++  GG                                                                         +S+ G   AF FS     +T       P   F A   P I   T    G G      AP   +             XXXXXXXXXXXXX       XXXXXXXXXXXXXXXXXXXXX             L ADK KD+ED  LAR++LA IP  L    E   S     +  XXXXXXXXXX   PEQ+ AELLELVEHRQHAGD EVAGKLAAIK   +A+ RREAVR LKHWA ELLDR++LFEAEVGDLE RTRTLYG+QLELAR+LR V L+VEQEE RRREG+ EEG+      RPWEA+FLDAFASVERETLVED+E LARA+ARML RGPH+        +SP   +      YRQ LR+RHGQL RR S             +K+WVGSQAE QLR+D +REL+AV  EKD  WQ L  DPE+GLYLEKAR +RRQ DRW   P+       RY V+                   + GSALALR       IGG   GRR    PPL A    R     + REARRVA++LGRVREELV EE+V+V++SDLG+G AA LE+LR+KRE RL   +RK  ++V  A+ STA       N APS  +P       +   +PP     G   +     G  SWN    S  S +PP++   P   P+  + GAG
Sbjct:    1 MSSISWQAHAIQALQVASSPYAKAEEEEAREEEPQLDGQGLEDGELLCAAGPSGLFIAALSSVDDETV-SWRLVFIPNEGLGADI--SAAKSGLCNEPYSVSL--SREVVLLASSHDGQYVAVAYAPGQESQSSTDVDIYHVEDLRGHDRRPRASVTVGHALRVLRWTRTGRNRLLLGGGRSLTVLCGDSNDGTFSARHDRDLDETLAAADWSPNDDEVMVVSCFGQAS-EGSVESLFDPYFVSEGSLTLQQALSGDVLSVLATGVRHWEDPDSIDEEDPEFRADRHNLVHLAWLHPDVLVGLNRRGDIGLLAVSSAPSRGFSPSGLAPMQVPTMESRFFAALMA---SPADAGNDGSSVRYLFVATSLDTYVQTADLTKPLEEDPSKKTGQRRTRPLEPAATEEGLPLVLGDGEAADVVPSKQRVCGLAVLTGKTGLGAKVHAPEQYRPLLVAAGVGGYAFFFALQDGGDGRAEQKLMVDAPTLLPAPARPMPTIAAPKFSSAAPGPTLSALASNVAFPKLSFAPSKPFSANSFXXXXXXXXXXSFA----------------FTSATGG---------------------------------------------------------LRPSAKEGGATGDFPGVSACGKETAFKFSSERAPVTGGNKPHNPPFSFQAQPPPPIVLPT----GAGSSLISNAPSRPSMPRDPSNQTPAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS--------LAADKVKDEEDTELARRQLAKIPASLPALAEGMPSVARTTAAPXXXXXXXXXXAGSPEQLLAELLELVEHRQHAGDEEVAGKLAAIKLPTQALARREAVRGLKHWAIELLDRIRLFEAEVGDLERRTRTLYGRQLELARRLRQVTLLVEQEETRRREGD-EEGKSMTWTGRPWEAEFLDAFASVERETLVEDMERLARAVARMLVRGPHASEGGKRGAVSPSLARSPFQKGYRQGLRDRHGQLGRRASGXXXXXXXXXXXXLKDWVGSQAETQLREDTVRELKAVVQEKDFFWQQLEKDPERGLYLEKARTRRRQLDRWMRAPRN-RETSTRYGVEXXXXXXXXXXXXXXXXXXXFAGSALALR-------IGGDVGGRRRPLGPPLHAVPSARLGHAPIAREARRVAVVLGRVREELVEEEDVEVRVSDLGVGDAAGLEALRRKRERRL---ERKAVIKVEAAVASTAASSPPAINSAPSALEPK-----GLGQGSPP---RSGESKSPHAPAGGVSWNR---SNMSAAPPTQSL-PAQSPSQFSFGAG 1206
The following BLAST results are available for this feature:
BLAST of NO15G01350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM22499.11.400e-25949.77hypothetical protein Naga_100011g56 [Nannochlorops... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL145nonsL145Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR063ngnoR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001471NSK001471Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G01350.1NO15G01350.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|670462gene_4679Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100011g56gene7986Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G01350.1NO15G01350.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G01350 ID=NO15G01350|Name=NO15G01350|organism=Nannochloropsis oceanica|type=gene|length=3979bp
ACTACAGGGGAAGCGAGAGCACACGAGCACTATGAGTCGTGTGTCATGGC
AGGCGCATGGCCTCAAGACGCTCAAGGTCAATCCCTCGCCCTACTCGTAC
GCGAAGGATGAGGAGGCGAGAGAAGACAACCCGCCTGTTGACGGACAGTC
GCAACCGGATGGGGAATTCTTGTGCACAGCAGGGCCCTTGGGCCTCTTTG
TGGCCTTAATTGCCGCCCAAGAAGGCGGTCAGGTGGAGTCTGGGCGGCTG
GTGTTTGTTCCTAATGAGATATTGCAACCTCGCTTGCTGGAAACGGCACA
AGAAAACGGGCTGTGGGATCAGCCGTATGGAGTGCCGCTGCCGGTGGGCA
GGGAAGCCGCGATGCTGGCCGCCTCATGGGATGGGCAATACGTGGCGGTG
GCTTACCTTCCCGCCGAGAAGGGTGGAAGTACAAGTGATGTGGAAGTTTA
TCATGTGGGTGATTTGCGCGTGCAGGACGGGAGGCCTCGGGCGTCGGCAA
CTGTGCAGCTTCCCCTGCGAACGCTGCGTTGGACACAGACAGGGCGGCAC
CGCCTCATGCTGGGCGGGGGACAATCACTCATGTTTTTGTGTGGGGATAG
CGGTGATGGATCCTTTGTTACCATGCCCATTCGGGATTTATCTGGGCCGT
TGGCGGCTGCGGATTGGAGTCCGAGTAGTGATGAGGTGATTGTGGTGTCA
TGCTTTGGGGAAGGGCCGGTGGAGGGTGGTGTGGAAAGTTTGTTCGATGC
TTATTTTCAGACTGCGTGTACATTGACATTGGAAACGGCTTTGGACGGGG
AGGTCATCTCGAGGCTGCCGACGGGAATTAGGCATTGGGAGGATCCACCG
GGCATCGACGTAGAAGAGCCTGAGTTCAGCGCTGATAGGAATAACGTCGT
CCATCTTGCATGGCTTCATCCTGATGTGTTGGTGGGTCTAAATAGGAGGG
GGGATGTGGGCTTGTTGGCTCTGGAATCGGCACCCTTGGAGGGGTTTGCT
CCCTCGGGACTTGCACCGATGGAGGTCCCTACCATGGAGTCCCGATTTTA
TTCGGTTTTGATGACAGACAAGAACAGCGGCAGCAGCAAGAAGAACGATG
ACAACGATGTGAAGTTTTTGTTCGTTACGCACTCCTTGGATCGGTACGTA
CACACGGCAGATCTGACCAAGCCAGTCGACTCGGATCCGAACATCAAGAC
GGGCCAACGTCGCGCCCGGCCCCTGGAGCCTGCCGCCGCCGAGGAAGGCT
TACCGCTAGTCCTGGCCGAGGGGGAGGTCTCTGCTCTCGTGCCTGCTAAA
CAGCGTGTATGCGGCTTGGGGTTGCTAACGAGCAAGACGGCCTTGGGCGC
GAAGGCATATGCCCGTGAGGAATATCGTCCTTTGCTCGTAGCGGCGGGTG
TTGGTGGATACGCTTTCCTTTTCGCCCTTCAGGATGGCGGTGACCTCCAA
GCAGAACAACGACTCCTAAAGGACCCTCCTAATGAACCAACTGCACCTCC
TCGTGCGGCTGCTGCTCCTACCTTAACCCCTGATTCTGCCTCTGCCCCGA
CCTCCGTGTTTGGAGCCACAACGATGCCTTCCGCTTTTGGTGCTGGATTC
GGGGCACCTACACTGACCCCTCGCTCTGCTGCTGGCGCTGCTGATGTTGC
TGCTCCTGCACCAATTTCATTCGCCAGCAGTACTGGTACGGCTCTGCCAC
CGATATCAGGTACGGTCTCTAATTTTAGCAATCCCCTTGGTGGGGGAACA
GGGTTTGGGGCTACTGGAGGAGGTCAAGGAGGAGGGATGTTTGGTGTAGG
GGGGGGGGGAGGAGGAAAGGGGAGCCTTATTAATGTACCGTTTCCCGCTC
CAGGAGAAAGAAAAGGAGGGGGGGGGGGGGGGGCAGGAGGTCTCTTTGGC
GCATCTCCTTCTTCGGCCACAGCCTCTTCTCCTTTTCCAGCTAGCAACAG
CAGCAACAGCAGAATAAGCTCGACGGGTGCCTTCCTATTTTCCGGTATCA
CCCCTGCTGCATCAGCCCCTGTCCCCTCCATCCCATTCTCCGCACCGCTG
AAGCCCTCTATCACCTCCTCAACGTCCTCATCTTTCGGATTTGGTGGGTT
GAACAGCCAGAAGGCGCCTGTCACTGCTGCCACTGCTCCTGCTTCGGCTC
CCTCGACAGCAAGCAAGCCACCTGCCTTTCCCCCGGCTGCAGCCGCGTCA
GCTCAAGTTCATTTGCCAGCTGATGGCTCAGATTTCGAGGAGGAAAAGGA
GAAGGAGGAGAAGGAGGAGAAGGAGGGGGAGGAGGGGGAAAGCTTTGGAG
GGGAGGACGAGGAGAAGAGGGGAAGGGAGATTCTTGAAGCAGACAAAGAG
AAAGACCAAGAAGACGCTACTCTGGCTCGACAGCGACTCGCGAGCATCCC
TCCTTTCCTTTCTATGACGGGGGAAAGAGGCAAGTCGTCAGTCCTACCTC
CTCCTTCTTCCTCCTCAAACGCAGCAGCAGGAAGCCCGGAGCAAATGTTT
GCGGAGCTACTAGAGCTGGTGGAGCACAGACAGCATGCAGGAGATGGAGA
GGTGGCAGGGAAATTGGCCGCAATCAAGGCGTCGGGAGAGGCGATGGATA
GGAGGGAGGCTGTGAGAGAATTGAAACATTGGGCTTGGGAATTGTTAGAT
CGCGTGCAATTGTTCGAGGCCGAGGTGGGGGATCTCGAGAATCGGACGCG
GACCCTGTATGGGAAACAGTTGGAGTTGGCTCGGAAGTTGAGGTTGGTTG
GGTTGATGGTTGAGCAGGAGGAGGCAAGGAGGAGGGAAGGGGAGGGGGAG
GAAGGGAGGCAGGAAGGGAGGGAGATGAGGCCATGGGAGGCAGATTTTTT
AGATGCATTTGCATCGGTAGAGAGAGAGACGTTAGTTGAGGATGTGGAGG
AACTGGCGAGGGCTATTGCTCGGATGCTGGCTCGGGGGCCGCATAGCGGC
AGTAGTAACTGCAGCATTTTGTTGTCGCCCCAGGGAGGGAAGGGGAAGTA
TCGTCAGGCTTTGAGAGAGAGACATGGGCAGCTGCAGCGACGGAGGAGCG
CAGAAGGGGGAGCGGTCGGGGGTTCAGGAATCAAGGAATGGGTGGGCTCC
CAGGCCGAGGCGCAGTTGAGAGATGATGTGATGAGGGAGCTGCAAGCTGT
GTGGGCGGAGAAGGATGCTCTGTGGCAGCTTCTGGGGAGCGATCCGGAGA
AGGGTTTGTATTTGGAAAAGGCACGGGTTCAACGACGGCAGCAGGATAGA
TGGAGGGAGACGCCGAAGAAGGTATCGGGGAGAGGGGGCCGGTATAGTGT
GGACGATGGGGAGGAGGAGGGCGAGGAAAGGGAGGTGGAGGAGTATGGAG
GCTCGGCGTTGGCGTTGCGTGGCAGTGATGGTGTAAGTGGGATAGGGGGA
AAGGCAGGAAGGAGGACGAGTCATCAACCGCCGTTGGCGGCACATGGAAG
AGGTCGAGAGGTGTTGCGGGAGGCAAGGCGTGTGGCGATGTTGTTGGGGA
GAGTGAGGGAGGAGCTGGTGGGGGAAGAAGAGGTGGATGTCAAGATCTCT
GATCTTGGTATAGGTGGTGCTGCAGCGTTGGAATCCTTGCGGAAGAAGAG
GGAGGAACGCCTCAAGGAAAACAAGCGTAAAACCGCCATGCAGGTCCGCA
CAGCTATTGTTTCTACAGCTAATCCTGCTCCATCGACTACTCAGCCCTCT
TATGGTGCTTCTACTTCAGTTTTTAGCGCTGCTCCTCCTCCTGCTCTGTC
TGGTGGCGGAGATGGGGCGATGGATAGAAAAGATGGGTCATCGTCCTGGA
ATAGTATGAGTGGGTCGACGTCTAGCACGAGCCCTCCCTCGCGTGGCCCC
GGCCCACAGCTACCGCCTACTGTAGGGGCAGTTGGAGCAGGGGTGTTCGG
CGGAACTGGTGGTATTAGTGGTGGCACTTTCGGTGGAATGGGGAAAGGCA
CGTTTAATTTTGGTGGGAGGGGGGGGTAG
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protein sequence of NO15G01350.1

>NO15G01350.1-protein ID=NO15G01350.1-protein|Name=NO15G01350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1316bp
MSRVSWQAHGLKTLKVNPSPYSYAKDEEAREDNPPVDGQSQPDGEFLCTA
GPLGLFVALIAAQEGGQVESGRLVFVPNEILQPRLLETAQENGLWDQPYG
VPLPVGREAAMLAASWDGQYVAVAYLPAEKGGSTSDVEVYHVGDLRVQDG
RPRASATVQLPLRTLRWTQTGRHRLMLGGGQSLMFLCGDSGDGSFVTMPI
RDLSGPLAAADWSPSSDEVIVVSCFGEGPVEGGVESLFDAYFQTACTLTL
ETALDGEVISRLPTGIRHWEDPPGIDVEEPEFSADRNNVVHLAWLHPDVL
VGLNRRGDVGLLALESAPLEGFAPSGLAPMEVPTMESRFYSVLMTDKNSG
SSKKNDDNDVKFLFVTHSLDRYVHTADLTKPVDSDPNIKTGQRRARPLEP
AAAEEGLPLVLAEGEVSALVPAKQRVCGLGLLTSKTALGAKAYAREEYRP
LLVAAGVGGYAFLFALQDGGDLQAEQRLLKDPPNEPTAPPRAAAAPTLTP
DSASAPTSVFGATTMPSAFGAGFGAPTLTPRSAAGAADVAAPAPISFASS
TGTALPPISGTVSNFSNPLGGGTGFGATGGGQGGGMFGVGGGGGGKGSLI
NVPFPAPGERKGGGGGGAGGLFGASPSSATASSPFPASNSSNSRISSTGA
FLFSGITPAASAPVPSIPFSAPLKPSITSSTSSSFGFGGLNSQKAPVTAA
TAPASAPSTASKPPAFPPAAAASAQVHLPADGSDFEEEKEKEEKEEKEGE
EGESFGGEDEEKRGREILEADKEKDQEDATLARQRLASIPPFLSMTGERG
KSSVLPPPSSSSNAAAGSPEQMFAELLELVEHRQHAGDGEVAGKLAAIKA
SGEAMDRREAVRELKHWAWELLDRVQLFEAEVGDLENRTRTLYGKQLELA
RKLRLVGLMVEQEEARRREGEGEEGRQEGREMRPWEADFLDAFASVERET
LVEDVEELARAIARMLARGPHSGSSNCSILLSPQGGKGKYRQALRERHGQ
LQRRRSAEGGAVGGSGIKEWVGSQAEAQLRDDVMRELQAVWAEKDALWQL
LGSDPEKGLYLEKARVQRRQQDRWRETPKKVSGRGGRYSVDDGEEEGEER
EVEEYGGSALALRGSDGVSGIGGKAGRRTSHQPPLAAHGRGREVLREARR
VAMLLGRVREELVGEEEVDVKISDLGIGGAAALESLRKKREERLKENKRK
TAMQVRTAIVSTANPAPSTTQPSYGASTSVFSAAPPPALSGGGDGAMDRK
DGSSSWNSMSGSTSSTSPPSRGPGPQLPPTVGAVGAGVFGGTGGISGGTF
GGMGKGTFNFGGRGG*
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Synonyms
Publications