Naga_100011g56, gene7986 (gene) Nannochloropsis gaditana

Overview
NameNaga_100011g56
Unique Namegene7986
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:168679..174544 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100011g56
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:168679..174544 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL063ngnoL063Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO15G01350NO15G01350Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna8246rna8246-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna8246rna8246Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna8246

>rna8246-protein ID=rna8246-protein|Name=rna8246|organism=Nannochloropsis gaditana|type=polypeptide|length=1822bp
MSSISWQAHAIQALQVASSPYAKAEEEEAREEEPQLDGQGLEDGELLCAA
GPSGLFIAALSSVDDETVSWRLVFIPNEGLGADISAAKSGLCNEPYSVSL
SREVVLLASSHDGQYVAVAYAPGQESQSSTDVDIYHVEDLRGHDRRPRAS
VTVGHALRVLRWTRTGRNRLLLGGGRSLTVLCGDSNDGTFSARHDRDLDE
TLAAADWSPNDDEVMVVSCFGQASEGSVESLFDPYFVSEGSLTLQQALSG
DVLSVLATGVRHWEDPDSIDEEDPEFRADRHNLVHLAWLHPDVLVGLNRR
GDIGLLAVSSAPSRGFSPSGLAPMQVPTMESRFFAALMASPADAGNDGSS
VRYLFVATSLDTYVQTADLTKPLEEDPSKKTGQRRTRPLEPAATEEGLPL
VLGDGEAADVVPSKQRVCGLAVLTGKTGLGAKVHAPEQYRPLLVAAGVGG
YAFFFALQDGGDGRAEQKLMVDAPTLLPAPARPMPTIAAPKFSSAAPGPT
LSALASNVAFPKLSFAPSKPFSANSFTSAQPKPASSSFAFTSATGGLRPS
AKEGGATGDFPGVSACGKETAFKFSSERAPVTGGNKPHNPPFSFQAQPPP
PIVLPTGAGSSLISNAPSRPSMPRDPSNQTPAGAAGHSSSSAAASMQVPL
PTDSGSEGESGGSVEWEKADGEREREERESLAADKVKDEEDTELARRQLA
KIPASLPALAEGMPSVARTTAAPPSIASNSAAAAGSPEQLLAELLELVEH
RQHAGDEEVAGKLAAIKLPTQALARREAVRGLKHWAIELLDRIRLFEAEV
GDLERRTRTLYGRQLELARRLRQVTLLVEQEETRRREGDEEGKSMTWTGR
PWEAEFLDAFASVERETLVEDMERLARAVARMLVRGPHASEGGKRGAVSP
SLARSPFQKGYRQGLRDRHGQLGRRASGGRMSEQESGGAMLKDWVGSQAE
TQLREDTVRELKAVVQEKDFFWQQLEKDPERGLYLEKARTRRRQLDRWMR
APRNRETSTRYGVEEEEGEEQGKENEEEEEERHFAGSALALRIGGDVGGR
RRPLGPPLHAVPSARLGHAPIAREARRVAVVLGRVREELVEEEDVEVRVS
DLGVGDAAGLEALRRKRERRLERKAVIKVEAAVASTAASSPPAINSAPSA
LEPKGLGQGSPPRSGESKSPHAPAGGVSWNRSNMSAAPPTQSLPAQSPSQ
FSFGAGAKASDVKESLNLLQRAAGPGEKEEARPKVRQATPSSAAAGYPPM
PTKAPSVFSIPGAANKGPAPATGQALGAINKQPSMISLNKVPASATKSAT
ETMSKSNLVKEGGGGGGTAAFPPMATRAPKPFSQQAKPAALAPSTASPAT
TVPSAPPPSAAPISFGFSGLKLGGGEKGPDAAPEGSSKTGMKATPSLFGT
SSPQVSDAKPDSSAASKVLVSTSAQPSTSGFSFGSNAPQAPAAAPSPALA
PAPAAGLFSTPIKSAGTTGGSFFGAQTQGNTSSAVSASGAPGLSTPTSSS
PAPSSFGGGGFKSTASVAGGFGFSQPQQKPQQQQLTPSTPVGGGFGSVLP
STMGGGGNAGLQGGFGGPSASNAGANAGPVERLRMFYEKYQPKNVSKAAE
LYEKHKDKVWDGVFKKYNVPEADRRQYYPEYLQQPLASFQQQPQQHASPL
TTTTTAQFGRAGSGLGMGGFTSPSANGLSQPQQQQQQQAHPQASGQTSGF
ATFANRGMGGFGSVSTTGTGFGPPGGTGFGMQPRPTLFGQSPSPQQQQTS
SFGSPPGAGSFGQGGGGGGAFGQGMGAPSVGGTFGQGVGTPSGFGFGGQQ
QSQQQQQSQQQHAFGSTSWTQR
back to top
Synonyms
Publications