jgi.p|Nanoce1779_2|670462, gene_4679 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|670462
Unique Namegene_4679
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_9:365102..371175 +

Link to JBrowse

Properties
Property NameValue
TranscriptId670548
ProteinId670462
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_9supercontigscaffold_9:365102..371175 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL006ncniL006Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO15G01350NO15G01350Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|670462mRNA_4679-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|670462mRNA_4679Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|670462

>mRNA_4679-protein ID=mRNA_4679-protein|Name=jgi.p|Nanoce1779_2|670462|organism=Nannochloropsis oceanica|type=polypeptide|length=1778bp
MSRVSWQAHGLKTLKVNPSPYSYAKDEEAREDNPPVDGQSQPDGEFLCTA
GPLGLFVALIAAQEGGQVESGRLVFVPNEILQPRLLETAQENGLWDQPYG
VPLPVGREAAMLAASWDGQYVAVAYLPAEKGGSTSDVEVYHVGDLRVQDG
RPRASATVQLPLRTLRWTQTGRHRLMLGGGQSLMFLCGDSGDGSFVTMPI
RDLSGPLAAADWSPSSDEVIVVSCFGEGPVEGGVESLFDAYFQTACTLTL
ETALDGEVISRLPTGIRHWEDPPGIDVEEPEFSADRNNVVHLAWLHPDVL
VGLNRRGDVGLLALESAPLEGFAPSGLAPMEVPTMESRFYSVLMTDKNSG
SSKKNDDNDVKFLFVTHSLDRYVHTADLTKPVDSDPNIKTGQRRARPLEP
AAAEEGLPLVLAEGEVSALVPAKQRVCGLGLLTSKTALGAKAYAREEYRP
LLVAAGVGGYAFLFALQDGGDLQAEQRLLKDPPNEPTAPPRAAAAPTLTP
DSASAPTSVFGATTMPSAFGAGFGAPTLTPRSAAGAADVAAPAPISFASS
TGTALPPISASNSSNSRISSTGAFLFSGITPAASAPVPSIPFSAPLKPSI
TSSTSSSFGFGGLNSQKAPVTAATAPASAPSTASKPPAFPPAAAASAQVH
LPADGSDFEEEKEKEEKEEKEGEEGESFGGEDEEKRGREILEADKEKDQE
DATLARQRLASIPPFLSMTGGRGKSSVLPPPSSSSNAAAGSPEQMFAELL
ELVEHRQHAGDGEVAGKLAAIKASGEAMDRREAVRELKHWAWELLDRVQL
FEAEVGDLENRTRTLYGKQLELARKLRLVGLMVEQEEARRREGEGEEGRQ
EGREMRPWEADFLDAFASVERETLVEDVEELARAIARMLARGPHSGSSNC
SILLSPQGGKGKYRQALRERHGQLQRRRSAEGGAVGGSGIKEWVGSQAEA
QLRDDVMRELQAVWAEKDALWQLLGSDPEKGLYLEKARVQRRQQDRWRET
PKKVSGRGGRYSVDDGEEEGEEREVEEYGGSALALRGSDGVSGIGGKAGR
RTSHQPPLAAHGRGREVLREARRVAMLLGRVREELVGEEEVDVKISDLGI
GGAAALESLRKKREERLKENKRKTAMQGQLEQGCSAELVVLVVALSVEWG
KARLILVGGGGVGGVGGKGEGGGEYPPMASKAPSPFNVQNATTGAAGADP
KAPAAAPASAPGVPASAPGVQGSLFKQLSMTSLSGAMTAAAGVKGSAGTS
STTAPQAKSGGGGGGGGGGGGKGTAAFPPMPTRAPKHFVQPVSSLTSVTT
AAIHSTTPTTAAVSKPVTTPTPDTAAPSASSSLDFGGMGMSLGSFAGGAN
ATSSTGGSTTDLKSTSLYGTVPAPAPPAAPAETKPPAAASSLTSASSLPS
STPSFGFAGGASLSATAAAPASATGLFNTPLKSTVNGTSSGFGGISLGGP
PSSAIQNPPVSSSSGGLVSAPPAPPAQGPPPFGGGGFGATASSAPLGGGG
GFGFGQQQNQQQAPPSTPAATSFGGGAPGGFGSPPVVIAAGSQGFEGLGP
EDRMRKFYEKYEPAKVPQVAKLWAKYTNRHASMWQTIFQKYNVPEGDRRL
YFMDLVAQEVALAPVFLAALQRVGRCNRSSSSSGSSHSSHNSHNSHRVSR
ADSPVLRIVGWVALGLQQLLEGRVLALREAQALGCNLARLGLVNPPSSRQ
DLAPRWVVVAVVGLGKEGGHLLGLVEGEDLVRGWVACLVEVLSDRLHLPL
QVLASGGSRSSSSSHSVVVHGRRDKSW*
back to top
Synonyms
Publications