NO15G00380, NO15G00380 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO15G00380 vs. NCBI_GenBank
Match: EWM20782.1 (exoribonuclease 2, partial [Nannochloropsis gaditana]) HSP 1 Score: 280.8 bits (717), Expect = 1.600e-71 Identity = 249/448 (55.58%), Postives = 278/448 (62.05%), Query Frame = 0 Query: 524 IVDWRHEEKMFDEESYLKGLLWNVQMYVDGYCPDYQFAYRYRFAPSASSLAGFIRNNTRDN-PSFRLDVPISHESPLHPALACLAVMPRWGLHLVPSNLSSVLSSSARVDGMYETDAPFSLDVLIDAVNVSHAHLIKSQHFHWTEVVASPP-SSP---XXXXXXXXXXXXXXXXXXXXXASSRSRKVAATQSPPLRSWVKAAHLFTPTPHSKRWKNAVKREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIMTKKXXXXXXXXXXXXFXXXXXXXXXXXXXXXXXXXXXXXXXXXTILLDGAQVLPXXXXXXXHXXXXXXXXSLPRAPTKNVSTLKA----SEEDTNSEPSFP---SSLPPKKRGRPRSAPKAHLMWGAAXXXXXXXXXXALLRASCRPGVF 960 +VDWR+EEK+FDEE YL+GLLWNVQMYVDGYCPDYQ+AYR+RFAPSA LA FIRN T++N SF L VP S PLHPALACLAVMPRWGLHLVP NLSSVL SSARV+ MYET A FSL++L+D VN SH HL++SQ+FHWTE+ A+ P +SP XXXXXXXXXXXXXXXX SR+RKVAATQSPPLRSWV++ L TP K+WK+ KRE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KK XXXXXX LLD AQVLP H P +P+ S + S D + FP SSLPPKKRGRPRS PKA +MW A LLRA+CRPG F Sbjct: 18 VVDWRYEEKLFDEEQYLRGLLWNVQMYVDGYCPDYQYAYRHRFAPSAQCLADFIRNQTKNNASSFALSVPTSLTPPLHPALACLAVMPRWGLHLVPENLSSVLESSARVNKMYETGAAFSLNLLMDTVNSSHPHLVRSQNFHWTEIKANTPCASPTXXXXXXXXXXXXXXXXXXSLHLPPLSRARKVAATQSPPLRSWVQSPSLLVSTPMPKKWKDTWKREVKEEERWGGKKSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAVPRRNGAGFQPSRG-----KRKKSSE----------APCPPSVXXXXXXTPVKLGQRSTPSPAASLLDRAQVLPARVPGSNH----------PSSPSSGASFFPSKPDFSSHDLDGPGEFPIPSSSLPPKKRGRPRSPPKARMMWDVA-------AEHTLLRAACRPGNF 433
BLAST of NO15G00380 vs. NCBI_GenBank
Match: CBJ28119.1 (5\'->3\' exoribonuclease, putative [Ectocarpus siliculosus]) HSP 1 Score: 230.7 bits (587), Expect = 1.900e-56 Identity = 180/620 (29.03%), Postives = 275/620 (44.35%), Query Frame = 0 Query: 26 LLLFLLLVAGLRPVDGGIYGFWKWFRGHYKDVVAKVGCDQYAEFDHVLIDVNQLTHMAARKAKDEDHAIRRLLKELGRTLRVLRARKSVVIAFDGPAPLAKIITQRKRRSSEKELNTV-INSLHLSPGTAFMRRAADAIIQFCHTRIETDTRP-RRGLRYYISCSECPGEGEVKLMDWINTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDADLVLQGLALPGLPDFNVFIPDIKRSGYF--VSLRQFIARLEKDFPGQSHNVRNDMVLLLVMAGNDYLKKVRGLTFRNKLMAYSNIKKRPEFKNQFMLLPQN--------KTFNWPFLQAFYDDL------ASRSY----VDDISTLLRGPTPAGVLNELMQKKILPPFL------LEFQGEGSA-----WTATLSI--DERTYRIEEPVSSIKVAKQTICEMVLKDMAPEAYLSYFPPKEEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIVDWRHEEKMFDEESYLKGLLWNVQMYVDGYCPDYQFAYRYRFAPSASSLAGFIRNNTRDNPSFRLDVPISHESPLHPALACLAVMP 611 +L+ LLL + + GI GF KWF + V + FDHV ID+NQ+ H+A RKA+DEDHAIRR+ +++ TL+ RKSVV AFDG APLAK++ QR RR + K + +++LHLSPGT FM A A+ + + TRP +G+++YIS + PGEGE+K +DW+ GGDADL+LQGLAL + N FI +G + S+ + + LE FPGQS VR D+ +L+++ GNDYL KVRG++F AY + KR + + + LP + K+ W FLQ D+ + Y ++ + R P V +Q+ L + L + GS+ W + + E TY V K E +L+++ P+ Y + E+ + + +FD ES+L G+LWN+QMY+DGY P + + Y R++PS + + +++ + D + L VP+ PL ++ACL ++P Sbjct: 5 ILVQLLLCQAIICAEAGINGFHKWFVQEFPTAV--TDASRVESFDHVCIDMNQILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHLSPGTKFMEDVASAMEYYA---FQECTRPCYQGVKFYISGANVPGEGELKCIDWLK-------------------------------------------------------------HMPKPDESAVIVGGDADLILQGLALSEVK--NTFICSQTDAGSYRLSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQAL-KRGKHRGVLLALPSDNFLVDGDKKSICWEFLQDLLADMIPSIVAEAEGYLAVSLEQMDLNNRYPPAGSVFKMAVQQGRLGDGVEIEVHDLSDEVSGSSGGTKKWKSVTWVRGKEYTYHFLH-VGKKKTVMHLAAEKLLEELLPDLYDEFL-----EQEKARLLEQAQLDQENEDIDSNLDKDSGAENGRECSSRKGKTPLFDVESFLLGVLWNLQMYIDGYVPSFYWRYSPRYSPSCADIVSWVKLASEDKLA-NLAVPVVGAPPLPASIACLCMLP 548
BLAST of NO15G00380 vs. NCBI_GenBank
Match: XP_005536497.1 (hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D] >BAM80461.1 hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 199.9 bits (507), Expect = 3.600e-47 Identity = 161/605 (26.61%), Postives = 262/605 (43.31%), Query Frame = 0 Query: 42 GIYGFWKWFRGHYKDVVAKVGCDQYAE-FDHVLIDVNQLTHMAARKAKDEDHAIRRLLKELGRTLRVLRARKSVVIAFDGPAPLAKIITQRKR---------RSSEKELNTVINSLHLSPGTAFMRRAADAIIQFCHTRIETDTRPRRGLRYYISCSECPGEGEVKLMDWINTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDADLVLQGLALPGLPDFNVFI----------PD----IKR---SGYFVSLRQFIARLEKDFPGQSHNVRNDMVLLLVMAGNDYLKKVRGLTFRNKLMAYSNIK-KRPEFKNQFMLLPQNKTFNWPFLQAFYDDLASRSYVDDISTLLRGPTPAGVLNELMQKKILPPFLLEFQGEGSAWTATLSIDERTYRIEEPVSSIKVAKQTICEMVLKDMAPEAYLSYFPPKEEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIVDWRHEEKMFDEESYLKGLLWNVQMYVDGYCPDYQFAYRYRFAPSASSLAGFIRNNTRDNPSFRLDVPISHESPLHPALACLAVMPRWGLHLVP 619 GI GF +W+ ++ V V + E FDHVL D+NQL H+AAR A++ D RL + L LR+ +KSV IAFDGPAPLAK++TQ++R R+ +++ ++ L LSPGT M+ A+ + +R+++ + +R+ +S PGEGE+K++D+I+ + G DADLV+ GLA + +F VF+ P+ KR S +S+ Q+I L++ FPG++ ++R D+V++L+M GNDYL K+RG +F + AY +K + + ++++ + ++F+W FL A L +N L+ L L+E E S + R+ + + V + CE KD P + E+ + +EK++D E +L+ LLW + MY+DG+CPD+ Y + PSAS + +++ N D P +L P+S PL P A LA++P L+P Sbjct: 2 GIAGFQRWYLENFPSTVVTVTGESAPEHFDHVLFDLNQLIHLAARVARNRDQFFIRLFRWLDNILRLCVPKKSVFIAFDGPAPLAKLVTQKRRRVLESRKLHRTRKRKRRCGVDVLSLSPGTELMQLTLQAVEFYVCSRLQSKRHLYQNVRFVVSGPTVPGEGEIKIIDYIHRY-------------------------------------------------------------VDPQHSVVVIGSDADLVVLGLATQKVRNFFVFVITPRANMQDAPEHGTAQKRQAISAIVISVWQWIRVLDRFFPGETPSLRLDLVVMLMMQGNDYLPKLRGTSFNSIWEAYKALKLDKGPMRGKYLVCREQRSFDWEFLYALMKRL---------------------INPLVPN--LTKELIEMYREASI------RGQEALRLAQ-AGNASVEASSSCESESKDSVER----NVHPSDLEDGTEPDAAHGEISADVTDPEDILEKVDIPEG----ISVDDDEKLYDTEEWLRTLLWALAMYIDGFCPDFYHTYSRAYGPSASDIVRWLKENDGD-PLLQLQPPLSVAPPLPPHAALLALVPASAARLLP 506
BLAST of NO15G00380 vs. NCBI_GenBank
Match: XP_005819111.1 (hypothetical protein GUITHDRAFT_121693 [Guillardia theta CCMP2712] >EKX32131.1 hypothetical protein GUITHDRAFT_121693 [Guillardia theta CCMP2712]) HSP 1 Score: 181.0 bits (458), Expect = 1.700e-41 Identity = 146/562 (25.98%), Postives = 231/562 (41.10%), Query Frame = 0 Query: 68 EFDHVLIDVNQLTHMAARKAKDEDHAIRRLLKELGRTLRVLRARKSVVIAFDGPAPLAKIITQ-RKRRSSEKELNTVINSLHLSPGTAFMRRAADAIIQFCHTRIETDTRPRRGLR---YYISCSECPGEGEVKLMDWINTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDADLVLQGLALPGLPDFNVFIPDIKRSGYFVSLRQFIARLEKDFPGQSHNVRNDMVLLLVMAGNDYLKKVRGLTFRNKLMAYSNIKKRPEFKNQFMLLPQNKTFNWPFLQAFYDDLASRSYVDDISTLLRGPTPAGVLNELMQKKILPPFLLEFQGEGSAWTATLSIDERTYRIEEPVSSIKVAKQTICEMVLKDMAPEAYLSYFPPKEEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIVDWRHEEKMFDEESYLKGLLWNVQMYVDGYCPDYQFAYRYRFAPSASSLAGFIRNNTRDNPSFRLDVPISHESPLHPALACLAVMPRWGLHLVPSNLSSVL 626 +FDHVL D+N + H AR K+ +R+ +++ LR+ KSVV+ FDGP P+AKI Q R K ++ ++S+ ++PGT FM + + C + R G R +Y+SCS+ GEGE+KL++WI+TF GGD+DL +Q LAL G IK +F+SL + LE FP S +R D++LL++ GNDYL ++ + Y+ +K + +F+++F+L + KTF++ FL F + +R IS P L++ +Q+ L + + Q E S + R E S K K + + Y PP+ E YLKG+LWN++MY+DG+ PD++F Y ++ PS+SS+ +I + + PS + + S+ PL PA CLAV P +P ++L Sbjct: 45 KFDHVLFDMNDMLHTCARNCKNSSAVCKRVFRQVDSYLRIFTPGKSVVLCFDGPGPIAKIPKQVESREKRTKVASSTLDSIDITPGTRFM----SEVRELCFAHVVQSLEQRGGYRDISFYLSCSDVAGEGELKLVEWIHTF-----------------------------------------------------------VESASKDRILFIGGDSDLTIQSLALRG------HSQRIKPM-HFISLSELKKELETIFPDHSDIIRFDLLLLIIFNGNDYLPPLKHFNLQVSFEVYTLMKSQEKFRSRFLLDGREKTFDYEFLAEFLKQVDARLKTWKIS------NPIVELHQYVQEGSLEYSVEDLQFEFS----------QEIREEHSASIDKHQKDFVDLLTNHRKGTSIPKRYEPPEMIER------------------------------------------------YLKGVLWNIKMYIDGFVPDFEFMYSFKKGPSSSSVVNWIESKVK--PSLKAE--SSNSRPLAPAELCLAVTPVRAADRLPLQYRNIL 468
BLAST of NO15G00380 vs. NCBI_GenBank
Match: XP_005837651.1 (hypothetical protein GUITHDRAFT_66805 [Guillardia theta CCMP2712] >EKX50671.1 hypothetical protein GUITHDRAFT_66805 [Guillardia theta CCMP2712]) HSP 1 Score: 152.9 bits (385), Expect = 5.000e-33 Identity = 101/303 (33.33%), Postives = 146/303 (48.18%), Query Frame = 0 Query: 76 VNQLTHMAARKAKDEDHAIRRLLKELGRTLRVLRARKSVVIAFDGPAPLAKIITQRKRRS-SEKELNTVINSLHLSPGTAFMRRAADAIIQFCHTRIETDTRPRRGLRYYISCSECPGEGEVKLMDWINTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDADLVLQGLALPGLPDFNVFI-------PDIKRS------GYFVSLRQFIARLEKDFPGQSHNVRNDMVLLLVMAGNDYLKKVRGLTFRNKLMAYSNIK 365 +N L H A RKAKD +HAI R+ KEL TLR L KSVV+AFDGP PLAK++TQRKRR+ S K ++ LH++PGT FM+ +A + R+ + + + +YIS ++ GEGE+K+++WI+ GGDADLVLQGLA+ + D V+ P +++ +S+ + + LE+ FPGQS VR D+++L++M GNDYL KVRG +F + AY +K Sbjct: 1 MNGLLHTACRKAKDFEHAILRVYKELDATLRTLIPTKSVVLAFDGPGPLAKLLTQRKRRNKSSKASKYKLSGLHITPGTKFMQTMREACEYYAALRLVASAK-FKNVAFYISGADVAGEGEIKIIEWIHNL-----------------------------------------------------------LQNQNDEKIIIVGGDADLVLQGLAVLRVKDLFVYAGKDMSQHPSSRKAKGKSSPSIVLSMWEVVRSLERLFPGQSQAVRADLIVLMIMNGNDYLPKVRGGSFESFFRAYKKVK 243
BLAST of NO15G00380 vs. NCBI_GenBank
Match: GAX15210.1 (5'-3' exoribonuclease 1 [Fistulifera solaris]) HSP 1 Score: 140.6 bits (353), Expect = 2.600e-29 Identity = 158/635 (24.88%), Postives = 242/635 (38.11%), Query Frame = 0 Query: 42 GIYGFWKWFRGHYKDVVAKVGCDQYAE-FDHVLIDVNQLTHMAARKAKDEDHAIRRLLKELGRTLRVLRARKSVVIAFDGPAPLAKIITQRKRR-----SSEKELNTV-----------------INSLHLSPGTAFMRRAADAIIQFCHTRIET-DTRPRRGLRYYISCSECPGEGEVKLMDWINTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDADLVLQGLALPGLPDFNVFIPDIKRSGYFVSLRQFIARLEK----DFPGQSHNVRNDMVLLLVMAGNDYLKKVRGLTFRNKLM-AYSNIKKRPEFKNQFMLLPQNKTFNWPFLQAFYDDLA------SRSYVDDISTLLRGP---TPAGVLNELMQKKILPPFLLEFQG------------EGSAWTATLSIDERTYRIEEPVSSIKVAKQTIC----------EMVLK--DMAPEAYLSYFPPKEEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIVDWRHEEKMF--DEESYLKGLLWNVQMYVDGYCPDYQFAY-RYRFAPSASSLAGFIRNNTRDNPSFRL-DVPISHESPLHPALACLAVMP 611 GI GF W Y D + + +Q E FDHVLID+NQ H+ R ++ ++HA+ L+KEL +++ KS+V+A DGP AK+ TQR+RR E+ L + L L+P T FM+ A++ + R+ ++ G+ YIS S PGEGEVKL++W+ GGDADLV++GL L P+ +P +K+ VS+ Q L + + + R D VLL+++ GNDY+ K+RG + N+LM AYS + + + N +++ ++ F F F+ +L+ S + D+ T L G L + + +I + E G + A + L +DE E+ VS E+VL+ D A + Y + + D + KM D YL GLLW +Q Y DG C DY F Y R APSA L + S + + + P+ +ACLA +P Sbjct: 21 GIRGFRTWLESTYPDAIYPIRRNQDQENFDHVLIDLNQFLHIIVRNSRSDEHALLLLMKELDLLIQMATPTKSLVLAIDGPPSAAKLATQRQRRLEKIIKVERTLKRLKQRPLRVARRKRSILGDTRVLALTPSTKFMKSVEQALLYWTWQRLSNRNSCLPEGVHVYISPSSAPGEGEVKLLEWL---------------------------------------------------------YRHASQPHQINESVALLGGDADLVVEGLML-NRPNVFCLLPHVKKQFSCVSVWQLTRDLARKTGVQYADELPQRRLDWVLLILLNGNDYVNKLRGSSGFNRLMKAYSKVLR--HYPNGGLVVIESLDFQLDFCIEFFQELSRNLQPFSETSADECDTCLSKLYQFAATGYLPQPVNFEIKLDVIDENNGVNTNKEDDDEAFDYEANSLFLGLDE-----EDDVSETGFDXXXXXXXXNDTTGKNELVLQLGDPASDDYYEF-------SAWVPQGHKLKGAKQRLASVALRELLVTDEIEFVLDDMKVRGKMIECDVPLYLYGLLWTLQTYQDGACADYGFQYGDRRLAPSAKDLVEYFEQAKAAGRSIGISSLRNGYTPPVAAGIACLAALP 583
BLAST of NO15G00380 vs. NCBI_GenBank
Match: PFH36153.1 (hypothetical protein BESB_043450 [Besnoitia besnoiti]) HSP 1 Score: 131.3 bits (329), Expect = 1.600e-26 Identity = 113/427 (26.46%), Postives = 167/427 (39.11%), Query Frame = 0 Query: 87 AKDEDHAIRRLLKELGRTLRVLRARKSVVIAFDGPAPLAKIITQRKRRSSEKELNTV-----------------------------------------------------------------------INSLHLSPGTAFMRRAADAIIQFCHTRIETDTRPR-RGLRYYISCSECPGEGEVKLMDWINTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDADLVLQGLALPGLPDFNVFIP-----DIKRSGYFVSLRQFIARLEKDFPGQSHNVRNDMVLLLVMAGNDYLKKVRGLTFRNKLMAYSNIKKRPEFKNQFMLLPQNKTFNWPFLQAFYDDLASRSYVDDI--------STLLRGP---TPAGVLNELMQKKIL 426 A+DE+ +RRL+ + T+R LR RKS+V A DG PLAK++T KRR +++ L I S L+PGTAFM+R + +F R+ + PR R L+++IS S GEGE+KL+DW+ G DADLV+Q LA PG P+ V+ P D K + SLR +A L+ FPG+SH +R D+ LL V+ GNDYL K G TF AYS +++RPEF + ++ + F++ F AF ++L S + I + L+ P +P ++N+L+ + L Sbjct: 181 AEDEEAVLRRLVSLIAATVRRLRPRKSIVFALDGVPPLAKLLTTAKRRRAKQPLAAEDDEGAEELEGDSRDGGCADGRGDEEERDADGTQAEGSGCTADSEDVRWRAGSTDAAAESAEAPPKKKERYRIPSYLLTPGTAFMQRVEETCKRFAWQRLAS---PRDRHLKFFISGSTSYGEGELKLIDWLRA----------------------------------------STQGRQAPACFAASPSAEPPTASAAEESVAIVGADADLVVQALAFPGAPNLFVYNPQRRLSDAKHTRTLYSLRHLLAALDLQFPGRSHLIRRDLALLCVLNGNDYLPKAGGFTFPRFFEAYSAVRRRPEFADASLVKATTRAFDFSFFLAFLEELDKLSSLRLIALQQMRMATVALQAPAKLSPLALMNQLLAQNRL 564
BLAST of NO15G00380 vs. NCBI_GenBank
Match: GAX28548.1 (5'-3' exoribonuclease 1 [Fistulifera solaris]) HSP 1 Score: 129.0 bits (323), Expect = 7.800e-26 Identity = 155/639 (24.26%), Postives = 238/639 (37.25%), Query Frame = 0 Query: 34 AGLRPVDGGIYGFWKWFRGHYKDVVAKV-GCDQYAEFDHVLIDVNQLTHMAARKAKDEDHAIRRLLKELGRTLRVLRARKSVVIAFDGPAPLAKIITQRKRR-----SSEKELNTVINS-----------------LHLSPGTAFMRRAADAIIQFCHTRIET-DTRPRRGLRYYISCSECPGEGEVKLMDWINTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDADLVLQGLALPGLPDFNVFIPDIKRSGYFVSLRQFIARLEKDFPGQSHNV----RNDMVLLLVMAGNDYLKKVRGLTFRNKLM-AYSNIKKRPEFKNQFMLLPQNKTFNWPFLQAFYDDLASRSY----------VDDISTLLRGPTPAGVLNELMQKKILPPFLLEFQGEGSAWTATLSIDERTYRIE---EPVSSIKVAKQTI----------------CEMVLKDMAPEAYLSYFPPKEEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIVDWRHEEKMF--DEESYLKGLLWNVQMYVDGYCPDYQFAY-RYRFAPSASSLAG-FIRNNTRDNPSFRLDVPISHESPLHPALACLAVMP 611 A L P++ GI GF W + D + + FDHVLID+NQ H+ R ++ +DHA+ L+KEL +++ KS+V+A DGP AK+ TQR+RR E+ L + S L L+P T FM+ A++ + R+ ++ G+ YIS S PGEGEVKL++W+ GGDADLV++GL L P+ +P +KR VS+ Q L + +S + R D VLL+++ GNDY+ K+RG + N++M AYS + +R N ++ ++ F F F+ +++ + + L G L + + +I F+ E + DE + E E V+K E+VL+ P++ Y E + D + K+ D YL GLLW +Q Y DG C DY F Y R +PSA L F++ + P +ACLA +P Sbjct: 37 ASLHPLN-GIRGFRSWLESTHPDAIYPIRQLQDQDNFDHVLIDLNQFLHVIVRNSRSDDHALVLLMKELDLLIQMATPTKSLVLAIDGPPSAAKLATQRQRRLEKIIKVERTLKQLKQSPLRVARRKRSIVADTRVLALTPSTNFMKSVEKALLYWTWQRLSNRNSCLPEGVHVYISPSSVPGEGEVKLLEWL---------------------------------------------------------YRHTSRPHQINESVAFLGGDADLVVEGLML-NRPNVFCLLPHVKRQFSCVSVWQLTRDLARKAGVRSVDELPQRRLDWVLLILLNGNDYVNKLRGSSGFNRVMKAYSKVLRR--HPNGGLVDIESLDFQLDFCIEFFQEISHNLIPFGEPDIPYSTNSFLSKLYQYAAVGYLPQPVTFEIKSDFI----DENNGLNTKKEDDEEAFDYESFSELNDDDDVSKSGFDLGYDESDENDTTGNKIELVLQLGDPDSDDFY-----EFSAWVPIGHCLKGAKQRLASIALRELLDTDEVESGLDDMKVRGKVIECDVPLYLYGLLWTLQTYQDGTCADYGFQYGGRRLSPSAKDLVEYFVQAKAAGRSVGISSLRKGFTQPATAGIACLAALP 605
BLAST of NO15G00380 vs. NCBI_GenBank
Match: CEM31660.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 126.3 bits (316), Expect = 5.000e-25 Identity = 140/518 (27.03%), Postives = 208/518 (40.15%), Query Frame = 0 Query: 20 LFFMPFLLLFLLLVAGL-RPVDGGIYGFWKWFRGHYKDVVAKVGCDQYAEFDHVLIDVNQLTHMA-ARKAKDEDHAIRRLLKELGRTLRVLRARKSVVIAFDGPAPLAKIITQRKRR-----SSEKELNTVINSLHLSPGTAF---MRRAADAIIQFCHTRIETDTRPRRGLRYYISCSECPGEGEVKLMDWINTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDADLVLQGLALPGLPDFNVFIPDIKRS-----------------GYFVSLRQF-IARLEKDFPGQSHNV-----RNDMVLLLVMAGNDYLKKVRGLTFRNKLMAYSNIKKRPEFKNQFMLLPQNK---------------TFNWPFLQAFYDDL-ASRSYVDDISTL--------------------LRGPTPAGVLNELMQKKILPPFLLEF----QGEGSAWTATLSIDERTYRIEEPVSSIKVAKQ 465 ++ M L+L LL+V GL GI GF K+F +K+ V + A H+ ID+NQL H A K +R L+ R L R +SVVIA DG APLAK+ITQRKRR + +K+ + L LSPGT M + AI C R + D + RR +YIS S PGEGE+K+ DW+ T GGDADL+LQ +ALP + D +V +P ++ G V R + + +L + S +V R D +LL+++ GNDY+ ++ G+ F N L AY +K+R F ++ ++ + +F+ L A D+L +V + L L PAG+LN+ +Q+K L ++F +G + T + DE R E + AK+ Sbjct: 1 MWIMVKLVLALLVVDGLVWMATAGIAGFHKFFEATFKEAVNE-DPTTLAPCSHLCIDLNQLLHQAMTGKGASVSRGLRFRLR---RLLGQFRPTRSVVIAIDGSAPLAKLITQRKRRLAPLPTDKKKRAKTLEKLALSPGTRVMDEMDKTVAAIALECMKR-QMD-KGRRPSTFYISGSRSPGEGELKIFDWLMT---------------------------------------------------------GMATHTQQNTRICIVGGDADLLLQAMALPEVLDIHVLVPTMRSKPHPKTQKKKQASAAVPPGEVVPFRAYSLRKLCEVLKWYSIDVDKWAARLDFILLMILNGNDYVPRLPGVGFDNLLEAYKQLKRRKAFADRTIVQIDVRDGGSGNGEGDGGVRVSFDPEMLCALIDELHRCWEFVVSLEALHRVIWRQWQETDSLTGEEKRLSAAAPAGILNDCIQQKRLHAVQVDFESAPEGHKAVLTVQVKADEALQRWEATAADKATAKR 455
BLAST of NO15G00380 vs. NCBI_GenBank
Match: XP_021879710.1 (XRN 5'-3' exonuclease N-terminus-domain-containing protein [Lobosporangium transversale] >ORZ11395.1 XRN 5'-3' exonuclease N-terminus-domain-containing protein [Lobosporangium transversale]) HSP 1 Score: 121.7 bits (304), Expect = 1.200e-23 Identity = 187/674 (27.74%), Postives = 287/674 (42.58%), Query Frame = 0 Query: 46 FWKWFRGHYKDVVAKVGCDQYAEFDHVLIDVNQLTHMAARKAKDEDHAIRRLLKELGRTLRVLRARKSVVIAFDGPAPLAKIITQRKRR---SSEKELNTVINSLHLSPGTAFMRRAADAI----IQFCHTRIETDTRPRRGLRYYISCSECPGEGEVKLMDWINTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDADLVLQGLALPGLPDFNVFIPD-IKRSGYFVSLRQFIARLEKDFPGQSHNVRNDMVLLLVMAGNDYLKKVRGLTFRNKLM--AYSNIK-------------KRPEFKNQFMLLPQNKTFNWPFLQAFYDDLASRSYVDDISTLLRGPTPAGVLNELMQKKILP----------------PFLLEFQGEGSAWTATLSID---ERTYRIEEPVSSIKVAKQTICEMVLKDMAPEAYLSYFPPKEEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIVDWRHEEKM------FDEESYLKGLLWNVQMYVDGYCPDYQFAYRYRFAPSASSLAGF---IRNNTRDN-----PSFR---LDVPISHESPLHPALACLAVMP-RWGLHLVPSNLSSVLSSSARVDGMYETDAPFSLDVLIDAVNVSHAHLIK 660 F +WF+ + + V V + + FD V ID+N + H A R A+DE ++ L L L + ++ DGPAP+AKI+TQ+ RR SS+K L ++SLHL+PG FM R + +++ R P L++ I S PGEGE K+++ I D+D VLQ +AL GLP+ V D I VS+ +F+ LE+ FPGQS+ VR D L + GNDYL RGL R + + AY K + ++QF++ + KTF+ FL+ L SY D L P PA ++ K P P + + + T+ + +D ++ Y + SI ++ ++ D L + + XXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++ + + +L+G+LWN++MY G CPD F Y Y AP ++ + I + ++D PS L+V + + LHP + L ++P G +P ++++V ++ + D S D + +A++ HLI+ Sbjct: 8 FIEWFQNKFPEAVRNVPNSEGSHFDSVFIDLNGILHPAIRNARDEAMFVKNLFAILDHLLVRFIPSRICYLSIDGPAPVAKILTQKARRATKSSKKNLKG-MSSLHLTPGCPFMLRLEQYVSYYAVRYLQQRQSKGISP--DLKFVIDHSNNPGEGESKIIENIK-----------------------------------------------------------QQAQNIRERPCAILSMDSDAVLQAIAL-GLPNIYVVRQDAIFNPAIVVSIDKFMRILEEQFPGQSNRVRLDFCALCLFRGNDYL---RGLAVRLEQLWKAYLFTKLIDPTIQGLRTGIEAETGEHQFLIDAKFKTFDLLFLK----QLILNSYKDP-KKLQLSPDPAQQDQTTLKSKRWPRKQKPRPDPESTQPNQPSIPIITKKNAGLTSNVHVDIVQDQVYGHDSDKESIDKSEGPENDVSDDDSGDIEALRATTNIDNYDAANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSDDPIALKSPRSSVKKFLEGILWNLEMYCSGTCPDVSFRYEYHCAPPRRAVIAYIDSIMDPSKDTYKDLVPSTTVRLLNVTRTAKKYLHPLVCGLILLPVDGGAAYLPQSIAAV---HTQIVSVQSPDVHLSQDEM-EAIDAKVKHLIE 606 The following BLAST results are available for this feature:
BLAST of NO15G00380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO15G00380 ID=NO15G00380|Name=NO15G00380|organism=Nannochloropsis oceanica|type=gene|length=4831bpback to top protein sequence of NO15G00380.1 >NO15G00380.1-protein ID=NO15G00380.1-protein|Name=NO15G00380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=942bpback to top protein sequence of NO15G00380.2 >NO15G00380.2-protein ID=NO15G00380.2-protein|Name=NO15G00380.2|organism=Nannochloropsis oceanica|type=polypeptide|length=964bpback to top protein sequence of NO15G00380.3 >NO15G00380.3-protein ID=NO15G00380.3-protein|Name=NO15G00380.3|organism=Nannochloropsis oceanica|type=polypeptide|length=883bpback to top Synonyms
Publications
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