NO15G00380.3, NO15G00380.3 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO15G00380.3
Unique Name	NO15G00380.3
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2742
Alignment location	chr15:126474..131304 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr15	genome	chr15:126474..131304 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO15G00380.3 vs.
Match: EWM20782.1 (exoribonuclease 2, partial [Nannochloropsis gaditana])

HSP 1 Score: 343.2 bits (879), Expect = 2.400e-90
Identity = 248/482 (51.45%), Postives = 294/482 (61.00%), Query Frame = 0

Query:  426 EDEDGGEGGREGGGEDAIVDWRHEEKMFDEESYLKGLLWNVQMYVDGYCPDYQFAYRYRFAPSASSLAGFIRNNTRDNPS-FRLDVPISHESPLHPALACLAVMPRWGLHLVPSNLSSVLSSSARVDGMYETDAPFSLDVLIDAVNVSHAHLIKSQHFHWTEVVASPPSSPSLPASPPPSSSSSHLPPSRPHAS------SRSRKVAATQSPPLRSWVKAAHLFTPTPHSKRWKNAVKREGGREGGREGGWGAGSGGVGGWRGGRKNTVGKEGRIGGAGAGSGGAGGRGGGGGGGEGGGGGGRGG------GKEGGGESRHIMTKKRKEGGREGGGEGFKPKKGDKKGAH--------PPSLP----KMGTQPSSSPATILLDGAQVLPPPSPPALHP-SPSSSSSSLPRAPTKNVSTLKASEEDTNSEPSFP---SSLPPKKRGRPRSAPKAHLMWGAAAAAAGAGAGEALLRASCRPGVF 879
            E+E+G EG  EGG E+ +VDWR+EEK+FDEE YL+GLLWNVQMYVDGYCPDYQ+AYR+RFAPSA  LA FIRN T++N S F L VP S   PLHPALACLAVMPRWGLHLVP NLSSVL SSARV+ MYET A FSL++L+D VN SH HL++SQ+FHWTE+ A+ P +   P+S PPSSSSS  PP  P  S      SR+RKVAATQSPPLRSWV++  L   TP  K+WK+  KRE   E      WG           G+K+   K GR           G +G  GGGG+G  G  +        G EGG + R     +R        G GF+P +G +K +         PPSLP    K+G + + SPA  LLD AQVLP   P + HP SPSS +S  P  P         S  D +    FP   SSLPPKKRGRPRS PKA +MW  AA          LLRA+CRPG F
Sbjct:    1 EEEEGLEGRTEGGEEEEVVDWRYEEKLFDEEQYLRGLLWNVQMYVDGYCPDYQYAYRHRFAPSAQCLADFIRNQTKNNASSFALSVPTSLTPPLHPALACLAVMPRWGLHLVPENLSSVLESSARVNKMYETGAAFSLNLLMDTVNSSHPHLVRSQNFHWTEIKANTPCASPTPSSSPPSSSSSTSPP--PSLSLHLPPLSRARKVAATQSPPLRSWVQSPSLLVSTPMPKKWKDTWKREVKEEER----WG-----------GKKSEASKAGR-----------GRKGEDGGGGQGKAGKAKSSPTSGDMGSEGGKKGRSTAVPRRN-------GAGFQPSRGKRKKSSEAPCPPSVPPSLPPTPVKLGQRSTPSPAASLLDRAQVLPARVPGSNHPSSPSSGASFFPSKP-------DFSSHDLDGPGEFPIPSSSLPPKKRGRPRSPPKARMMWDVAAE-------HTLLRAACRPGNF 433

The following BLAST results are available for this feature:

BLAST of NO15G00380.3 vs.

BLAST of NO15G00380.3 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM20782.1	2.400e-90	51.45	exoribonuclease 2, partial [Nannochloropsis gadita...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO15G00380	NO15G00380	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO15G00380.3	NO15G00380.3-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO15G00380.3.cds1	NO15G00380.3.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00380.3.cds2	NO15G00380.3.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00380.3.cds3	NO15G00380.3.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00380.3.cds4	NO15G00380.3.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00380.3.cds5	NO15G00380.3.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00380.3.cds6	NO15G00380.3.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00380.3.cds7	NO15G00380.3.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00380.3.cds8	NO15G00380.3.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00380.3.cds9	NO15G00380.3.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00380.3.cds10	NO15G00380.3.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00380.3.cds11	NO15G00380.3.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00380.3.cds12	NO15G00380.3.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00380.3.cds13	NO15G00380.3.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00380.3.cds14	NO15G00380.3.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00380.3.cds15	NO15G00380.3.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr15:126474..131304+
coding sequence from alignment at chr15:126474..131304+

mRNA sequence

>NO15G00380.3 ID=NO15G00380.3|Name=NO15G00380.3|organism=Nannochloropsis oceanica|type=mRNA|length=2742bp
AAAATCGACTACTCATATCCTCCTGCTCCCCTCCCTCCCTCCATCGGTCC
TTCCTTTTCTCCCTCCCTCCTCCTTCCCTTGCAGCTCACGCACATGGCGG
CGCGCAAAGCCAAGGATGAGGACCACGCCATCCGCCGCCTCCTCAAGGAA
CTCGGTCGAACCCTGCGGGTACTCCGCGCGCGAAAATCCGTCGTCATTGC
TTTTGATGGTCCTGCGCCCCTGGCCAAAATCATCACTCAACGGAAAAGAC
GGTCGTCGGAGAAGGAGTTGAACACCGTCATCAATTCCCTGCACCTCAGT
CCCGGCACTGCCTTCATGCGTCGAGCTGCTGACGCCATCATTCAGTTTTG
TCACACACGCATCGAAACAGACACACGTCCCCGTCGGGGTCTTCGGTACT
ACATTTCCTGCTCCGAATGTCCAGGCGAAGGCGAGGTCAAGCTCATGGAC
TGGATCAACACCTTCATGATGCCCCCGGAGGAGGAGAAAGAGGAGGACGA
GGAGAAGGGAGGGGGGGAGAAAGTGCAGGAGGGAGCGGGGGAGGAGGGAG
GCAAGGAAGGGATGACAGTGCGACAAGAGAAGACGAAGAAACAGCAGCAG
TATGACAAACACCAGCAGCAGAAAAAATTCAAGAAAAGGCGATACGGCTA
CTCGGACTCGGATAGCGTCGTGGTGGTGGGTGGAGATGCCGATTTGGTCC
TACAGGGCCTCGCCCTCCCTGGCCTTCCCGATTTTAACGTCTTCATCCCG
GATATTAAACGTTCGGGATATTTCGTCTCCTTACGTCAGTTTATCGCCCG
GCTTGAAAAAGACTTCCCGGGCCAGTCTCACAACGTCCGTAACGATATGG
TCCTCCTCCTCGTCATGGCCGGTAACGATTATTTGAAAAAAGTCCGAGGC
CTCACCTTCCGGAACAAGCTCATGGCTTACAGCAACATCAAGAAACGGCC
CGAGTTTAAAAATCAGTTTATGCTTCTCCCACAGAACAAGACCTTCAACT
GGCCCTTCCTCCAGGCCTTCTACGACGACCTTGCCTCCCGCTCCTACGTC
GATGATATTTCCACTCTCCTCCGCGGACCTACACCTGCCGGTGTCCTCAA
TGAGCTCATGCAGAAGAAGATCCTGCCCCCCTTCCTCCTCGAGTTCCAAG
GTGAAGGGAGCGCTTGGACGGCTACTCTGTCGATTGACGAGAGGACGTAC
CGTATCGAGGAGCCTGTGTCGTCCATAAAGGTCGCCAAGCAGACCATCTG
CGAGATGGTCTTGAAGGACATGGCTCCCGAAGCGTATCTCTCCTACTTCC
CTCCCAAGGAGGAGGAGGAAGAATGCGATCCCTCGGCCGACCCGAACGAG
GAGGACGAGGACGAGGACGAGGACGAGGACGGAGGGGAGGGCGGGAGGGA
GGGCGGGGGGGAGGACGCGATTGTGGATTGGCGGCACGAGGAGAAGATGT
TCGACGAGGAAAGCTACCTGAAAGGGCTCCTGTGGAACGTACAGATGTAC
GTCGACGGCTACTGCCCCGACTACCAATTCGCCTACAGGTACCGCTTCGC
CCCCTCTGCCAGCTCCCTCGCCGGCTTCATCCGCAACAACACACGGGACA
ATCCGTCCTTCCGTCTGGACGTTCCGATCTCTCACGAATCCCCCCTCCAT
CCCGCCCTCGCATGCCTAGCCGTCATGCCAAGGTGGGGCCTGCACCTAGT
GCCTTCCAACCTGTCGTCGGTATTAAGCTCGTCCGCCCGGGTGGATGGCA
TGTACGAGACAGACGCACCCTTCAGCTTGGACGTTCTGATTGACGCCGTA
AATGTCTCCCATGCCCACCTCATTAAATCCCAGCATTTTCACTGGACCGA
GGTCGTCGCCTCGCCCCCTTCCTCTCCCTCCCTCCCTGCATCACCCCCTC
CCTCGTCCTCCTCCTCCCACCTCCCTCCCTCCCGCCCTCATGCCTCATCG
AGGTCAAGGAAAGTCGCTGCGACGCAGAGCCCCCCCTTGCGATCGTGGGT
GAAGGCCGCCCATCTCTTTACCCCCACCCCCCATAGCAAGCGGTGGAAAA
ACGCCGTGAAGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGTGG
GGGGCTGGGAGCGGTGGTGTAGGGGGATGGAGGGGGGGGCGGAAGAATAC
CGTTGGGAAGGAGGGGAGGATAGGAGGAGCAGGAGCGGGTAGTGGAGGAG
CAGGAGGTCGAGGAGGAGGAGGAGGAGGAGGAGAAGGAGGAGGAGGAGGA
GGAAGAGGAGGAGGGAAAGAAGGAGGGGGAGAAAGCCGGCATATAATGAC
GAAAAAGCGGAAGGAGGGAGGGAGAGAGGGAGGAGGGGAAGGTTTCAAGC
CGAAGAAAGGAGACAAGAAGGGCGCCCACCCTCCCTCCCTCCCAAAAATG
GGAACCCAGCCCTCCTCCTCCCCCGCTACCATCTTGCTCGATGGCGCGCA
AGTCTTGCCGCCTCCCTCCCCGCCCGCCCTCCATCCCTCCCCCTCCTCCT
CCTCCTCTTCGCTCCCTCGGGCTCCGACCAAAAACGTTTCGACCCTTAAA
GCAAGCGAGGAGGATACGAACAGTGAGCCTTCCTTCCCTTCCTCCCTCCC
GCCTAAGAAGAGAGGCCGGCCTCGATCGGCACCCAAGGCCCATTTGATGT
GGGGAGCAGCAGCGGCAGCAGCAGGAGCAGGAGCAGGAGAAGCGTTGCTT
CGTGCTTCTTGTCGGCCCGGGGTCTTTCGCCCTCATTTTTAG

protein sequence of NO15G00380.3

>NO15G00380.3-protein ID=NO15G00380.3-protein|Name=NO15G00380.3|organism=Nannochloropsis oceanica|type=polypeptide|length=883bp
MAARKAKDEDHAIRRLLKELGRTLRVLRARKSVVIAFDGPAPLAKIITQR
KRRSSEKELNTVINSLHLSPGTAFMRRAADAIIQFCHTRIETDTRPRRGL
RYYISCSECPGEGEVKLMDWINTFMMPPEEEKEEDEEKGGGEKVQEGAGE
EGGKEGMTVRQEKTKKQQQYDKHQQQKKFKKRRYGYSDSDSVVVVGGDAD
LVLQGLALPGLPDFNVFIPDIKRSGYFVSLRQFIARLEKDFPGQSHNVRN
DMVLLLVMAGNDYLKKVRGLTFRNKLMAYSNIKKRPEFKNQFMLLPQNKT
FNWPFLQAFYDDLASRSYVDDISTLLRGPTPAGVLNELMQKKILPPFLLE
FQGEGSAWTATLSIDERTYRIEEPVSSIKVAKQTICEMVLKDMAPEAYLS
YFPPKEEEEECDPSADPNEEDEDEDEDEDGGEGGREGGGEDAIVDWRHEE
KMFDEESYLKGLLWNVQMYVDGYCPDYQFAYRYRFAPSASSLAGFIRNNT
RDNPSFRLDVPISHESPLHPALACLAVMPRWGLHLVPSNLSSVLSSSARV
DGMYETDAPFSLDVLIDAVNVSHAHLIKSQHFHWTEVVASPPSSPSLPAS
PPPSSSSSHLPPSRPHASSRSRKVAATQSPPLRSWVKAAHLFTPTPHSKR
WKNAVKREGGREGGREGGWGAGSGGVGGWRGGRKNTVGKEGRIGGAGAGS
GGAGGRGGGGGGGEGGGGGGRGGGKEGGGESRHIMTKKRKEGGREGGGEG
FKPKKGDKKGAHPPSLPKMGTQPSSSPATILLDGAQVLPPPSPPALHPSP
SSSSSSLPRAPTKNVSTLKASEEDTNSEPSFPSSLPPKKRGRPRSAPKAH
LMWGAAAAAAGAGAGEALLRASCRPGVFRPHF*

mRNA from alignment at chr15:126474..131304+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO15G00380.3 ID=NO15G00380.3|Name=NO15G00380.3|organism=Nannochloropsis oceanica|type=mRNA|length=4831bp|location=Sequence derived from alignment at chr15:126474..131304+ (Nannochloropsis oceanica)
AAAATCGACTACTCATATCCTCCTGCTCCCCTCCCTCCCTCCATCGGTCC
TTCCTTTTCTCCCTCCCTCCTCCTTCCCTTGCAGCTCACGCACATGGCGG
CGCGCAAAGCCAAGGATGAGGACCACGCCATCCGCCGCCTCCTCAAGGAA
CTCGGTCGAACCCTGCGGGTACGTGCCCCCCTTCCTTCCCTCCCTCCTTT
ACTTCCTCCCTCACAGCCTTAGGGGATCTTCCTGACCCTCCATCCCTCCC
TCCCTCCCTCCCTCCTTCTCTTCCTTCCTCGCCATCTTTGCCTCTCATCC
GTTGTTTCTTCATTTCCCTTTCATTTCCATATATCCTCCCTCCCTCCTTC
CCTCCAGGTACTCCGCGCGCGAAAATCCGTCGTCATTGCTTTTGATGGTC
CTGCGCCCCTGGCCAAAATCATCACTCAACGGAAAAGACGGTCGTCGGAG
AAGGAGTTGAACACCGTCATCAATTCCCTGCACCTCAGTCCCGGGTGAGA
CTCTCGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCAT
TACGTTGAACGTGAACGTCATGCATCACACTCACACCTACGCCCATCCCG
CTCCTCCTTCCCCTCCTCTCTCCCTTCCTCCCTCCATCCCAGCACTGCCT
TCATGCGTCGAGCTGCTGACGCCATCATTCAGTTTTGTCACACACGCATC
GAAACAGACACACGTCCCCGTCGGTACGGAGTATCCCTCCCTCCCTCCCT
CCCTTCCTCTCTTCCTTCCTCATTCCTTATGGTCGCTCATTTCCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTAGGGGTCTTCGGT
ACTACATTTCCTGCTCCGAATGTCCAGGCGAAGGCGAGGTAAGGCTATCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCCCTTCTTTCTATCTCCCCTCTTTCCACCTCTCATTTCCTCCCTCCCT
CCTTCCCTCCCTCCCTCCAGGTCAAGCTCATGGACTGGATCAACACCTTC
ATGATGCCCCCGGAGGAGGAGAAAGAGGAGGACGAGGAGAAGGGAGGGGG
GGAGAAAGTGCAGGAGGGAGCGGGGGAGGAGGGAGGCAAGGAAGGGATGA
CAGTGCGACAAGAGAAGACGAAGAAACAGCAGCAGTATGACAAACACCAG
CAGCAGAAAAAATTCAAGAAAAGGCGATACGGCTACTCGGACTCGGATAG
CGTCGTGGTGGTGGGTGGAGATGCCGATTTGGTCCTACAGGTACCTCCCT
CCCTCCCCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTTCCTAATTT
TTACGCTTCGATTTAAATCCCTTGGTCTTCTCACTCCTCCCTCCCTCCCT
CCAGGGCCTCGCCCTCCCTGGCCTTCCCGATTTTAACGTCTTCATCCCGG
ATATTAAACGTTCGGGATATTTCGTCTCCTTACGGTACGAGCCCCCCTCC
CTCCTCCCCTCCCTCCCTTCCCTCTTTTCTCTTCTTTACTACCATTTCTT
CACGGTTCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTCCCC
TTTACAGTCAGTTTATCGCCCGGCTTGAAAAAGACTTCCCGGGCCAGTCT
CACAACGTCCGTAACGATATGGTCCTCCTCCTCGTCATGGCCGGTAACGA
TTATTTGAAAAAAGTCCGAGGTACGTGCCTTTCTTCCTTTCCCTCCCTCA
ATCCCTCCCTTCCTTTTTTAGCTATCCCCCCCCCCTCAATAAACGTCTTC
ATCTGTCTACATCGCTCCCTTTCTGCCTCCCTTCCTTCTTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCAGGCCTCACCTTCCGGAACAAGCTCATGGC
TTACAGCAACATCAAGAAACGGCCCGAGTTTAAAAATCAGTTTATGCTTC
TCCCACAGAACAAGACCTTCAACTGGCCCTTCCTCCAGGTAGGCATGCCC
TTTCTCCCTGCTTTCCTCTTTGTCCTCACCCTTCCCTTCAATTCCCATGA
CCTCATTTTTCTCTCTCCTTTCCTCCCTCCCTCCCTCCCTTTGTCCCTTC
CTTCATCCCTTCCCCCTCGCCATATTGCACTTTTCTTCCTTCTCACCTAT
CTCTATCTCTCTGCCTCTCCCTCCCTCCCTCCAGGCCTTCTACGACGACC
TTGCCTCCCGCTCCTACGTCGATGATATTTCCACTCTCCTCCGCGGACCT
ACACCTGCCGGTGTCCTCAATGAGCTCATGCAGAAGAAGATCCTGCCCCC
CTTCCTCCTCGAGTTCCAAGGTGAAGGTAAGGTCTTACCCCTCCCTCCCT
CCCTCCCTCCCTCCTTCCCTTCCTCCCTCCGCAGCTCCACCCTCTCCAAG
ATATCCAACAAGCAGATGTTGAAGATCTCCCTCCCTCCCTTTCTTCTTCT
CTCCCTCCCTCCCTCCCTCCCTCCCTTTACTCCTCAGGGAGCGCTTGGAC
GGCTACTCTGTCGATTGACGAGAGGACGTACCGTATCGAGGAGCCTGTGT
CGTCCATAAAGGTGGGGAGGGAGGGTGGAAAGGGGATTGGAATCCATGCA
CGCTATTCGTGATTGACGCTCTCACATATCACCGGCATCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCTTCCCTCAGGTCGCCAAGCAGACCATCTGCGA
GATGGTCTTGAAGGACATGGCTCCCGAAGCGTATCTCTCCTACTTCCCTC
CCAAGGAGGAGGAGGAAGAATGTAAGGAGGGAGGGAGGGAGGGAGTGATG
ATGACTAGCTCTGCAGTCGTGTCTACAACTTACGCTCTACCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCCTCCCTCCCTCCCCCCTTCCAAAGGC
GATCCCTCGGCCGACCCGAACGAGGAGGACGAGGACGAGGACGAGGACGA
GGACGGAGGGGAGGGCGGGAGGGAGGGCGGGGGGGAGGACGCGATTGTGG
ATTGGCGGCACGAGGAGAAGATGTTCGACGAGGAAAGCTACCTGAAAGGG
CTCCTGTGGAACGTACAGATGTACGTCGACGGCTACTGCCCCGACTACCA
ATTCGCCTACAGGTATCATGGCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCGCTCGACTCTCCTTCGGGGGGGGATGTCGCAACATGTTGTCCCTCC
CTCCCTCCCTCCCTCCCTCCTTCCCTCCCTCCTTCCCTCCCTCCCTCCCT
CCATGTATCCCTTTGTCGATTCTCTCCCTCTCCCCTGTTCCACATCCCTC
CCCCCCTCCCTCCCTTCCTCTCTCCAGGTACCGCTTCGCCCCCTCTGCCA
GCTCCCTCGCCGGCTTCATCCGCAACAACACACGGGACAATCCGTCCTTC
CGTCTGGACGTTCCGATCTCTCACGAATCCCCCCTCCATCCCGCCCTCGC
ATGCCTAGCCGTCATGCCAAGGTAGCCTTCCCCTCCCCCTCCCTCCCTCA
TTCCCTCCCTCCCTCCTTTCCTTCCTTCCTCCCTGCCCTTCTTTTGTTCA
AAATGAAACTTGAGAGTCACAATTTCACTTTCTTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCACAGGTGGGGCCTGCACC
TAGTGCCTTCCAACCTGTCGTCGGTATTAAGCTCGTCCGCCCGGGTGGAT
GGCATGTACGAGACAGACGCACCCTTCAGCTTGGACGTTCTGATTGGTGA
GGAGGGAGGGAGGGAGGGAGGGAAGGAGGGAGAGAGGAAGGACTCGGCCA
GCATCTCCATCGTTCACCTCCCTCATCCATTTCTCTACCCCTCCCTCCTT
CCCTCCTTCCCTCCCTCCTTCCCTCCCTCAGACGCCGTAAATGTCTCCCA
TGCCCACCTCATTAAATCCCAGCATTTTCACTGGACCGAGGTCGTCGCCT
CGCCCCCTTCCTCTCCCTCCCTCCCTGCATCACCCCCTCCCTCGTCCTCC
TCCTCCCACCTCCCTCCCTCCCGCCCTCATGCCTCATCGAGGTCAAGGAA
AGTCGCTGCGACGCAGAGCCCCCCCTTGCGATCGTGGGTGAAGGCCGCCC
ATCTCTTTACCCCCACCCCCCATAGCAAGCGGTGGAAAAACGCCGTGAAG
AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGTGGGGGGCTGGGAG
CGGTGGTGTAGGGGGATGGAGGGGGGGGCGGAAGAATACCGTTGGGAAGG
AGGGGAGGATAGGAGGAGCAGGAGCGGGTAGTGGAGGAGCAGGAGGTCGA
GGAGGAGGAGGAGGAGGAGGAGAAGGAGGAGGAGGAGGAGGAAGAGGAGG
AGGGAAAGAAGGAGGGGGAGAAAGCCGGCATATAATGACGAAAAAGCGGA
AGGAGGGAGGGAGAGAGGGAGGAGGGGAAGGTTTCAAGCCGAAGAAAGGA
GACAAGAAGGGCGCCCACCCTCCCTCCCTCCCAAAAATGGGAACCCAGCC
CTCCTCCTCCCCCGCTACCATCTTGCTCGATGGCGCGCAAGTCTTGCCGC
CTCCCTCCCCGCCCGCCCTCCATCCCTCCCCCTCCTCCTCCTCCTCTTCG
CTCCCTCGGGCTCCGACCAAAAACGTTTCGACCCTTAAAGCAAGCGAGGA
GGATACGAACAGTGAGCCTTCCTTCCCTTCCTCCCTCCCGCCTAAGAAGA
GAGGCCGGCCTCGATCGGCACCCAAGGCCCATTTGATGTGGGGAGCAGCA
GCGGCAGCAGCAGGAGCAGGAGCAGGAGAAGCGTTGCTTCGTGCTTCTTG
TCGGCCCGGGGTCTTTCGCCCTCATTTTTAG

Coding sequence (CDS) from alignment at chr15:126474..131304+

>NO15G00380.3 ID=NO15G00380.3|Name=NO15G00380.3|organism=Nannochloropsis oceanica|type=CDS|length=2649bp|location=Sequence derived from alignment at chr15:126474..131304+ (Nannochloropsis oceanica)
ATGGCGGCGCGCAAAGCCAAGGATGAGGACCACGCCATCCGCCGCCTCCT
CAAGGAACTCGGTCGAACCCTGCGGGTACTCCGCGCGCGAAAATCCGTCG
TCATTGCTTTTGATGGTCCTGCGCCCCTGGCCAAAATCATCACTCAACGG
AAAAGACGGTCGTCGGAGAAGGAGTTGAACACCGTCATCAATTCCCTGCA
CCTCAGTCCCGGCACTGCCTTCATGCGTCGAGCTGCTGACGCCATCATTC
AGTTTTGTCACACACGCATCGAAACAGACACACGTCCCCGTCGGGGTCTT
CGGTACTACATTTCCTGCTCCGAATGTCCAGGCGAAGGCGAGGTCAAGCT
CATGGACTGGATCAACACCTTCATGATGCCCCCGGAGGAGGAGAAAGAGG
AGGACGAGGAGAAGGGAGGGGGGGAGAAAGTGCAGGAGGGAGCGGGGGAG
GAGGGAGGCAAGGAAGGGATGACAGTGCGACAAGAGAAGACGAAGAAACA
GCAGCAGTATGACAAACACCAGCAGCAGAAAAAATTCAAGAAAAGGCGAT
ACGGCTACTCGGACTCGGATAGCGTCGTGGTGGTGGGTGGAGATGCCGAT
TTGGTCCTACAGGGCCTCGCCCTCCCTGGCCTTCCCGATTTTAACGTCTT
CATCCCGGATATTAAACGTTCGGGATATTTCGTCTCCTTACGTCAGTTTA
TCGCCCGGCTTGAAAAAGACTTCCCGGGCCAGTCTCACAACGTCCGTAAC
GATATGGTCCTCCTCCTCGTCATGGCCGGTAACGATTATTTGAAAAAAGT
CCGAGGCCTCACCTTCCGGAACAAGCTCATGGCTTACAGCAACATCAAGA
AACGGCCCGAGTTTAAAAATCAGTTTATGCTTCTCCCACAGAACAAGACC
TTCAACTGGCCCTTCCTCCAGGCCTTCTACGACGACCTTGCCTCCCGCTC
CTACGTCGATGATATTTCCACTCTCCTCCGCGGACCTACACCTGCCGGTG
TCCTCAATGAGCTCATGCAGAAGAAGATCCTGCCCCCCTTCCTCCTCGAG
TTCCAAGGTGAAGGGAGCGCTTGGACGGCTACTCTGTCGATTGACGAGAG
GACGTACCGTATCGAGGAGCCTGTGTCGTCCATAAAGGTCGCCAAGCAGA
CCATCTGCGAGATGGTCTTGAAGGACATGGCTCCCGAAGCGTATCTCTCC
TACTTCCCTCCCAAGGAGGAGGAGGAAGAATGCGATCCCTCGGCCGACCC
GAACGAGGAGGACGAGGACGAGGACGAGGACGAGGACGGAGGGGAGGGCG
GGAGGGAGGGCGGGGGGGAGGACGCGATTGTGGATTGGCGGCACGAGGAG
AAGATGTTCGACGAGGAAAGCTACCTGAAAGGGCTCCTGTGGAACGTACA
GATGTACGTCGACGGCTACTGCCCCGACTACCAATTCGCCTACAGGTACC
GCTTCGCCCCCTCTGCCAGCTCCCTCGCCGGCTTCATCCGCAACAACACA
CGGGACAATCCGTCCTTCCGTCTGGACGTTCCGATCTCTCACGAATCCCC
CCTCCATCCCGCCCTCGCATGCCTAGCCGTCATGCCAAGGTGGGGCCTGC
ACCTAGTGCCTTCCAACCTGTCGTCGGTATTAAGCTCGTCCGCCCGGGTG
GATGGCATGTACGAGACAGACGCACCCTTCAGCTTGGACGTTCTGATTGA
CGCCGTAAATGTCTCCCATGCCCACCTCATTAAATCCCAGCATTTTCACT
GGACCGAGGTCGTCGCCTCGCCCCCTTCCTCTCCCTCCCTCCCTGCATCA
CCCCCTCCCTCGTCCTCCTCCTCCCACCTCCCTCCCTCCCGCCCTCATGC
CTCATCGAGGTCAAGGAAAGTCGCTGCGACGCAGAGCCCCCCCTTGCGAT
CGTGGGTGAAGGCCGCCCATCTCTTTACCCCCACCCCCCATAGCAAGCGG
TGGAAAAACGCCGTGAAGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG
AGGGTGGGGGGCTGGGAGCGGTGGTGTAGGGGGATGGAGGGGGGGGCGGA
AGAATACCGTTGGGAAGGAGGGGAGGATAGGAGGAGCAGGAGCGGGTAGT
GGAGGAGCAGGAGGTCGAGGAGGAGGAGGAGGAGGAGGAGAAGGAGGAGG
AGGAGGAGGAAGAGGAGGAGGGAAAGAAGGAGGGGGAGAAAGCCGGCATA
TAATGACGAAAAAGCGGAAGGAGGGAGGGAGAGAGGGAGGAGGGGAAGGT
TTCAAGCCGAAGAAAGGAGACAAGAAGGGCGCCCACCCTCCCTCCCTCCC
AAAAATGGGAACCCAGCCCTCCTCCTCCCCCGCTACCATCTTGCTCGATG
GCGCGCAAGTCTTGCCGCCTCCCTCCCCGCCCGCCCTCCATCCCTCCCCC
TCCTCCTCCTCCTCTTCGCTCCCTCGGGCTCCGACCAAAAACGTTTCGAC
CCTTAAAGCAAGCGAGGAGGATACGAACAGTGAGCCTTCCTTCCCTTCCT
CCCTCCCGCCTAAGAAGAGAGGCCGGCCTCGATCGGCACCCAAGGCCCAT
TTGATGTGGGGAGCAGCAGCGGCAGCAGCAGGAGCAGGAGCAGGAGAAGC
GTTGCTTCGTGCTTCTTGTCGGCCCGGGGTCTTTCGCCCTCATTTTTAG

Synonyms

Publications