NO15G00380.1, NO15G00380.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO15G00380.1
Unique Name	NO15G00380.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3513
Alignment location	chr15:125282..131304 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr15	genome	chr15:125282..131304 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO15G00380.1 vs.
Match: EWM20782.1 (exoribonuclease 2, partial [Nannochloropsis gaditana])

HSP 1 Score: 343.2 bits (879), Expect = 2.600e-90
Identity = 248/482 (51.45%), Postives = 294/482 (61.00%), Query Frame = 0

Query:  485 EDEDGGEGGREGGGEDAIVDWRHEEKMFDEESYLKGLLWNVQMYVDGYCPDYQFAYRYRFAPSASSLAGFIRNNTRDNPS-FRLDVPISHESPLHPALACLAVMPRWGLHLVPSNLSSVLSSSARVDGMYETDAPFSLDVLIDAVNVSHAHLIKSQHFHWTEVVASPPSSPSLPASPPPSSSSSHLPPSRPHAS------SRSRKVAATQSPPLRSWVKAAHLFTPTPHSKRWKNAVKREGGREGGREGGWGAGSGGVGGWRGGRKNTVGKEGRIGGAGAGSGGAGGRGGGGGGGEGGGGGGRGG------GKEGGGESRHIMTKKRKEGGREGGGEGFKPKKGDKKGAH--------PPSLP----KMGTQPSSSPATILLDGAQVLPPPSPPALHP-SPSSSSSSLPRAPTKNVSTLKASEEDTNSEPSFP---SSLPPKKRGRPRSAPKAHLMWGAAAAAAGAGAGEALLRASCRPGVF 938
            E+E+G EG  EGG E+ +VDWR+EEK+FDEE YL+GLLWNVQMYVDGYCPDYQ+AYR+RFAPSA  LA FIRN T++N S F L VP S   PLHPALACLAVMPRWGLHLVP NLSSVL SSARV+ MYET A FSL++L+D VN SH HL++SQ+FHWTE+ A+ P +   P+S PPSSSSS  PP  P  S      SR+RKVAATQSPPLRSWV++  L   TP  K+WK+  KRE   E      WG           G+K+   K GR           G +G  GGGG+G  G  +        G EGG + R     +R        G GF+P +G +K +         PPSLP    K+G + + SPA  LLD AQVLP   P + HP SPSS +S  P  P         S  D +    FP   SSLPPKKRGRPRS PKA +MW  AA          LLRA+CRPG F
Sbjct:    1 EEEEGLEGRTEGGEEEEVVDWRYEEKLFDEEQYLRGLLWNVQMYVDGYCPDYQYAYRHRFAPSAQCLADFIRNQTKNNASSFALSVPTSLTPPLHPALACLAVMPRWGLHLVPENLSSVLESSARVNKMYETGAAFSLNLLMDTVNSSHPHLVRSQNFHWTEIKANTPCASPTPSSSPPSSSSSTSPP--PSLSLHLPPLSRARKVAATQSPPLRSWVQSPSLLVSTPMPKKWKDTWKREVKEEER----WG-----------GKKSEASKAGR-----------GRKGEDGGGGQGKAGKAKSSPTSGDMGSEGGKKGRSTAVPRRN-------GAGFQPSRGKRKKSSEAPCPPSVPPSLPPTPVKLGQRSTPSPAASLLDRAQVLPARVPGSNHPSSPSSGASFFPSKP-------DFSSHDLDGPGEFPIPSSSLPPKKRGRPRSPPKARMMWDVAAE-------HTLLRAACRPGNF 433

The following BLAST results are available for this feature:

BLAST of NO15G00380.1 vs.

BLAST of NO15G00380.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM20782.1	2.600e-90	51.45	exoribonuclease 2, partial [Nannochloropsis gadita...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO15G00380	NO15G00380	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO15G00380.1	NO15G00380.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO15G00380.1.cds1	NO15G00380.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00380.1.cds2	NO15G00380.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00380.1.cds3	NO15G00380.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00380.1.cds4	NO15G00380.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00380.1.cds5	NO15G00380.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00380.1.cds6	NO15G00380.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00380.1.cds7	NO15G00380.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00380.1.cds8	NO15G00380.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00380.1.cds9	NO15G00380.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00380.1.cds10	NO15G00380.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00380.1.cds11	NO15G00380.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00380.1.cds12	NO15G00380.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00380.1.cds13	NO15G00380.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00380.1.cds14	NO15G00380.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00380.1.cds15	NO15G00380.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00380.1.cds16	NO15G00380.1.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00380.1.cds17	NO15G00380.1.cds17	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr15:125282..131304+
coding sequence from alignment at chr15:125282..131304+

mRNA sequence

>NO15G00380.1 ID=NO15G00380.1|Name=NO15G00380.1|organism=Nannochloropsis oceanica|type=mRNA|length=3513bp
TCTCGCCGACTGTGCCCTCCCCCCCAAAACCCCTCGCCGTGAAGAAGGCA
GCACTGCAACGGACACGTGTGATGTCTCCCTTGTTGCTGCTTTTCCTCAC
AACTTCTGCCGCATGTATGCACAGGCACAGGCATCACCGGCGATAATAGC
AGCTAGAGTAGCATCAGGACGTGAGGATACCGGTCGAAGGGTGCTGAGAA
CAAGACAAATCAAGCGGAACGTCCGTCAGCAGCCTATATTCCTTATCCAT
CTCGTGGGATAAAGCACCGCACACACCTACCCTTCCAAGGGATGACAAGA
AGGAGAGGAGTCAGCAGCAGGGGCAGCAGCAGAGGGAAGGCTGGTACGTA
CTGTACTTGAAGGTTTTGACCTAAGTTAGCGGATACACACGCTCAAGCAC
CATGCATGCACCATTTTTCCGACTGCCCACAATATGCCACGCCACGCTCA
CCATCACAACCATCAGCGACCAGCCCTGAGCAGCACAGTCCATTGCACCT
TGTCCAATGCCTTTCGTTTCGTCGGCTTGAAGAATGTCATGAATGCCACC
GTCCTATGTTAGCCTCCTGAAAGACAAGACGAAAGACGAAAGACCGATTC
TCCGATCCGACTCCCTTCCTCTCCTTCCTCATTCATCATATCATCCCCTT
GCTCCTTTCCGACGCACACGCAGGCCGGCTTTTCTTCATGCCCTTTCTCC
TCCTCTTTTTACTGCTCGTCGCGGGCTTAAGGCCGGTGGATGGCGGGATA
TACGGGTTTTGGAAGTGGTTCCGAGGCCACTACAAGGACGTTGTTGCCAA
GGTGGGCTGTGACCAATACGCGGAATTCGATCATGTGCTCATCGATGTCA
ATCAGCTCACGCACATGGCGGCGCGCAAAGCCAAGGATGAGGACCACGCC
ATCCGCCGCCTCCTCAAGGAACTCGGTCGAACCCTGCGGGTACTCCGCGC
GCGAAAATCCGTCGTCATTGCTTTTGATGGTCCTGCGCCCCTGGCCAAAA
TCATCACTCAACGGAAAAGACGGTCGTCGGAGAAGGAGTTGAACACCGTC
ATCAATTCCCTGCACCTCAGTCCCGGCACTGCCTTCATGCGTCGAGCTGC
TGACGCCATCATTCAGTTTTGTCACACACGCATCGAAACAGACACACGTC
CCCGTCGGGGTCTTCGGTACTACATTTCCTGCTCCGAATGTCCAGGCGAA
GGCGAGGTCAAGCTCATGGACTGGATCAACACCTTCATGATGCCCCCGGA
GGAGGAGAAAGAGGAGGACGAGGAGAAGGGAGGGGGGGAGAAAGTGCAGG
AGGGAGCGGGGGAGGAGGGAGGCAAGGAAGGGATGACAGTGCGACAAGAG
AAGACGAAGAAACAGCAGCAGTATGACAAACACCAGCAGCAGAAAAAATT
CAAGAAAAGGCGATACGGCTACTCGGACTCGGATAGCGTCGTGGTGGTGG
GTGGAGATGCCGATTTGGTCCTACAGGGCCTCGCCCTCCCTGGCCTTCCC
GATTTTAACGTCTTCATCCCGGATATTAAACGTTCGGGATATTTCGTCTC
CTTACGTCAGTTTATCGCCCGGCTTGAAAAAGACTTCCCGGGCCAGTCTC
ACAACGTCCGTAACGATATGGTCCTCCTCCTCGTCATGGCCGGTAACGAT
TATTTGAAAAAAGTCCGAGGCCTCACCTTCCGGAACAAGCTCATGGCTTA
CAGCAACATCAAGAAACGGCCCGAGTTTAAAAATCAGTTTATGCTTCTCC
CACAGAACAAGACCTTCAACTGGCCCTTCCTCCAGGCCTTCTACGACGAC
CTTGCCTCCCGCTCCTACGTCGATGATATTTCCACTCTCCTCCGCGGACC
TACACCTGCCGGTGTCCTCAATGAGCTCATGCAGAAGAAGATCCTGCCCC
CCTTCCTCCTCGAGTTCCAAGGTGAAGGGAGCGCTTGGACGGCTACTCTG
TCGATTGACGAGAGGACGTACCGTATCGAGGAGCCTGTGTCGTCCATAAA
GGTCGCCAAGCAGACCATCTGCGAGATGGTCTTGAAGGACATGGCTCCCG
AAGCGTATCTCTCCTACTTCCCTCCCAAGGAGGAGGAGGAAGAATGCGAT
CCCTCGGCCGACCCGAACGAGGAGGACGAGGACGAGGACGAGGACGAGGA
CGGAGGGGAGGGCGGGAGGGAGGGCGGGGGGGAGGACGCGATTGTGGATT
GGCGGCACGAGGAGAAGATGTTCGACGAGGAAAGCTACCTGAAAGGGCTC
CTGTGGAACGTACAGATGTACGTCGACGGCTACTGCCCCGACTACCAATT
CGCCTACAGGTACCGCTTCGCCCCCTCTGCCAGCTCCCTCGCCGGCTTCA
TCCGCAACAACACACGGGACAATCCGTCCTTCCGTCTGGACGTTCCGATC
TCTCACGAATCCCCCCTCCATCCCGCCCTCGCATGCCTAGCCGTCATGCC
AAGGTGGGGCCTGCACCTAGTGCCTTCCAACCTGTCGTCGGTATTAAGCT
CGTCCGCCCGGGTGGATGGCATGTACGAGACAGACGCACCCTTCAGCTTG
GACGTTCTGATTGACGCCGTAAATGTCTCCCATGCCCACCTCATTAAATC
CCAGCATTTTCACTGGACCGAGGTCGTCGCCTCGCCCCCTTCCTCTCCCT
CCCTCCCTGCATCACCCCCTCCCTCGTCCTCCTCCTCCCACCTCCCTCCC
TCCCGCCCTCATGCCTCATCGAGGTCAAGGAAAGTCGCTGCGACGCAGAG
CCCCCCCTTGCGATCGTGGGTGAAGGCCGCCCATCTCTTTACCCCCACCC
CCCATAGCAAGCGGTGGAAAAACGCCGTGAAGAGGGAGGGAGGGAGGGAG
GGAGGGAGGGAGGGAGGGTGGGGGGCTGGGAGCGGTGGTGTAGGGGGATG
GAGGGGGGGGCGGAAGAATACCGTTGGGAAGGAGGGGAGGATAGGAGGAG
CAGGAGCGGGTAGTGGAGGAGCAGGAGGTCGAGGAGGAGGAGGAGGAGGA
GGAGAAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGGAAAGAAGGAGGGGG
AGAAAGCCGGCATATAATGACGAAAAAGCGGAAGGAGGGAGGGAGAGAGG
GAGGAGGGGAAGGTTTCAAGCCGAAGAAAGGAGACAAGAAGGGCGCCCAC
CCTCCCTCCCTCCCAAAAATGGGAACCCAGCCCTCCTCCTCCCCCGCTAC
CATCTTGCTCGATGGCGCGCAAGTCTTGCCGCCTCCCTCCCCGCCCGCCC
TCCATCCCTCCCCCTCCTCCTCCTCCTCTTCGCTCCCTCGGGCTCCGACC
AAAAACGTTTCGACCCTTAAAGCAAGCGAGGAGGATACGAACAGTGAGCC
TTCCTTCCCTTCCTCCCTCCCGCCTAAGAAGAGAGGCCGGCCTCGATCGG
CACCCAAGGCCCATTTGATGTGGGGAGCAGCAGCGGCAGCAGCAGGAGCA
GGAGCAGGAGAAGCGTTGCTTCGTGCTTCTTGTCGGCCCGGGGTCTTTCG
CCCTCATTTTTAG

protein sequence of NO15G00380.1

>NO15G00380.1-protein ID=NO15G00380.1-protein|Name=NO15G00380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=942bp
MPFLLLFLLLVAGLRPVDGGIYGFWKWFRGHYKDVVAKVGCDQYAEFDHV
LIDVNQLTHMAARKAKDEDHAIRRLLKELGRTLRVLRARKSVVIAFDGPA
PLAKIITQRKRRSSEKELNTVINSLHLSPGTAFMRRAADAIIQFCHTRIE
TDTRPRRGLRYYISCSECPGEGEVKLMDWINTFMMPPEEEKEEDEEKGGG
EKVQEGAGEEGGKEGMTVRQEKTKKQQQYDKHQQQKKFKKRRYGYSDSDS
VVVVGGDADLVLQGLALPGLPDFNVFIPDIKRSGYFVSLRQFIARLEKDF
PGQSHNVRNDMVLLLVMAGNDYLKKVRGLTFRNKLMAYSNIKKRPEFKNQ
FMLLPQNKTFNWPFLQAFYDDLASRSYVDDISTLLRGPTPAGVLNELMQK
KILPPFLLEFQGEGSAWTATLSIDERTYRIEEPVSSIKVAKQTICEMVLK
DMAPEAYLSYFPPKEEEEECDPSADPNEEDEDEDEDEDGGEGGREGGGED
AIVDWRHEEKMFDEESYLKGLLWNVQMYVDGYCPDYQFAYRYRFAPSASS
LAGFIRNNTRDNPSFRLDVPISHESPLHPALACLAVMPRWGLHLVPSNLS
SVLSSSARVDGMYETDAPFSLDVLIDAVNVSHAHLIKSQHFHWTEVVASP
PSSPSLPASPPPSSSSSHLPPSRPHASSRSRKVAATQSPPLRSWVKAAHL
FTPTPHSKRWKNAVKREGGREGGREGGWGAGSGGVGGWRGGRKNTVGKEG
RIGGAGAGSGGAGGRGGGGGGGEGGGGGGRGGGKEGGGESRHIMTKKRKE
GGREGGGEGFKPKKGDKKGAHPPSLPKMGTQPSSSPATILLDGAQVLPPP
SPPALHPSPSSSSSSLPRAPTKNVSTLKASEEDTNSEPSFPSSLPPKKRG
RPRSAPKAHLMWGAAAAAAGAGAGEALLRASCRPGVFRPHF*

mRNA from alignment at chr15:125282..131304+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO15G00380.1 ID=NO15G00380.1|Name=NO15G00380.1|organism=Nannochloropsis oceanica|type=mRNA|length=6023bp|location=Sequence derived from alignment at chr15:125282..131304+ (Nannochloropsis oceanica)
TCTCGCCGACTGTGCCCTCCCCCCCAAAACCCCTCGCCGTGAAGAAGGCA
GCACTGCAACGGACACGTGTGATGTCTCCCTTGTTGCTGCTTTTCCTCAC
AACTTCTGCCGCATGTATGCACAGGCACAGGCATCACCGGCGATAATAGC
AGCTAGAGTAGCATCAGGACGTGAGGATACCGGTCGAAGGGTGCTGAGAA
CAAGACAAATCAAGCGGAACGTCCGTCAGCAGCCTATATTCCTTATCCAT
CTCGTGGGATAAAGCACCGCACACACCTACCCTTCCAAGGGATGACAAGA
AGGAGAGGAGTCAGCAGCAGGGGCAGCAGCAGAGGGAAGGCTGGTACGTA
CTGTACTTGAAGGTTTTGACCTAAGTTAGCGGATACACACGCTCAAGCAC
CATGCATGCACCATTTTTCCGACTGCCCACAATATGCCACGCCACGCTCA
CCATCACAACCATCAGCGACCAGCCCTGAGCAGCACAGTCCATTGCACCT
TGTCCAATGCCTTTCGTTTCGTCGGCTTGAAGAATGTCATGAATGCCACC
GTCCTATGTTAGCCTCCTGAAAGACAAGACGAAAGACGAAAGACCGATTC
TCCGATCCGACTCCCTTCCTCTCCTTCCTCATTCATCATATCATCCCCTT
GCTCCTTTCCGACGCACACGCAGGCCGGCTTTTCTTCATGCCCTTTCTCC
TCCTCTTTTTACTGCTCGTCGCGGGCTTAAGGCCGGTGGATGGCGGGATA
TACGGGTTTTGGAAGTGGTTCCGAGGTGAGAGGAGAGGAGGGGAAGGAGA
GGGGAGGGAGGGGTGAGAAGAGGGCATTGGTCCGCATGACAACGGGCAGG
TGGGTAGAAATAGAAGGCTCTGAATGCAAGGTCTTTGAGCATTATCCTAT
CATTATCCCATGCTGAAAGGCTTCGAATGGCTGGCTGAAGCTCAACTTGT
TGTCACGTCTTAGGCTGGAAAGCTTTGAATACGACGAGGCCTTTTCGCAA
GTTACTCTCGTCATGCCATCCAGTTTTTTACCTCCCGTCCTCCCTTCATC
CATCCATTCCTCCCTTCAGGCCACTACAAGGACGTTGTTGCCAAGGTGGG
CTGTGACCAATACGCGGAATTCGATCATGTGCTCATCGATGTCAATCAGG
TAGGGAGGGAGGGAGGGAGGGACGGAGGGAGTTTTTTTTTTTAAAATCGA
CTACTCATATCCTCCTGCTCCCCTCCCTCCCTCCATCGGTCCTTCCTTTT
CTCCCTCCCTCCTCCTTCCCTTGCAGCTCACGCACATGGCGGCGCGCAAA
GCCAAGGATGAGGACCACGCCATCCGCCGCCTCCTCAAGGAACTCGGTCG
AACCCTGCGGGTACGTGCCCCCCTTCCTTCCCTCCCTCCTTTACTTCCTC
CCTCACAGCCTTAGGGGATCTTCCTGACCCTCCATCCCTCCCTCCCTCCC
TCCCTCCTTCTCTTCCTTCCTCGCCATCTTTGCCTCTCATCCGTTGTTTC
TTCATTTCCCTTTCATTTCCATATATCCTCCCTCCCTCCTTCCCTCCAGG
TACTCCGCGCGCGAAAATCCGTCGTCATTGCTTTTGATGGTCCTGCGCCC
CTGGCCAAAATCATCACTCAACGGAAAAGACGGTCGTCGGAGAAGGAGTT
GAACACCGTCATCAATTCCCTGCACCTCAGTCCCGGGTGAGACTCTCGCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCATTACGTTGA
ACGTGAACGTCATGCATCACACTCACACCTACGCCCATCCCGCTCCTCCT
TCCCCTCCTCTCTCCCTTCCTCCCTCCATCCCAGCACTGCCTTCATGCGT
CGAGCTGCTGACGCCATCATTCAGTTTTGTCACACACGCATCGAAACAGA
CACACGTCCCCGTCGGTACGGAGTATCCCTCCCTCCCTCCCTCCCTTCCT
CTCTTCCTTCCTCATTCCTTATGGTCGCTCATTTCCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTAGGGGTCTTCGGTACTACATT
TCCTGCTCCGAATGTCCAGGCGAAGGCGAGGTAAGGCTATCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCCTTC
TTTCTATCTCCCCTCTTTCCACCTCTCATTTCCTCCCTCCCTCCTTCCCT
CCCTCCCTCCAGGTCAAGCTCATGGACTGGATCAACACCTTCATGATGCC
CCCGGAGGAGGAGAAAGAGGAGGACGAGGAGAAGGGAGGGGGGGAGAAAG
TGCAGGAGGGAGCGGGGGAGGAGGGAGGCAAGGAAGGGATGACAGTGCGA
CAAGAGAAGACGAAGAAACAGCAGCAGTATGACAAACACCAGCAGCAGAA
AAAATTCAAGAAAAGGCGATACGGCTACTCGGACTCGGATAGCGTCGTGG
TGGTGGGTGGAGATGCCGATTTGGTCCTACAGGTACCTCCCTCCCTCCCC
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTTCCTAATTTTTACGCTT
CGATTTAAATCCCTTGGTCTTCTCACTCCTCCCTCCCTCCCTCCAGGGCC
TCGCCCTCCCTGGCCTTCCCGATTTTAACGTCTTCATCCCGGATATTAAA
CGTTCGGGATATTTCGTCTCCTTACGGTACGAGCCCCCCTCCCTCCTCCC
CTCCCTCCCTTCCCTCTTTTCTCTTCTTTACTACCATTTCTTCACGGTTC
TTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTCCCCTTTACAGT
CAGTTTATCGCCCGGCTTGAAAAAGACTTCCCGGGCCAGTCTCACAACGT
CCGTAACGATATGGTCCTCCTCCTCGTCATGGCCGGTAACGATTATTTGA
AAAAAGTCCGAGGTACGTGCCTTTCTTCCTTTCCCTCCCTCAATCCCTCC
CTTCCTTTTTTAGCTATCCCCCCCCCCTCAATAAACGTCTTCATCTGTCT
ACATCGCTCCCTTTCTGCCTCCCTTCCTTCTTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCAGGCCTCACCTTCCGGAACAAGCTCATGGCTTACAGCA
ACATCAAGAAACGGCCCGAGTTTAAAAATCAGTTTATGCTTCTCCCACAG
AACAAGACCTTCAACTGGCCCTTCCTCCAGGTAGGCATGCCCTTTCTCCC
TGCTTTCCTCTTTGTCCTCACCCTTCCCTTCAATTCCCATGACCTCATTT
TTCTCTCTCCTTTCCTCCCTCCCTCCCTCCCTTTGTCCCTTCCTTCATCC
CTTCCCCCTCGCCATATTGCACTTTTCTTCCTTCTCACCTATCTCTATCT
CTCTGCCTCTCCCTCCCTCCCTCCAGGCCTTCTACGACGACCTTGCCTCC
CGCTCCTACGTCGATGATATTTCCACTCTCCTCCGCGGACCTACACCTGC
CGGTGTCCTCAATGAGCTCATGCAGAAGAAGATCCTGCCCCCCTTCCTCC
TCGAGTTCCAAGGTGAAGGTAAGGTCTTACCCCTCCCTCCCTCCCTCCCT
CCCTCCTTCCCTTCCTCCCTCCGCAGCTCCACCCTCTCCAAGATATCCAA
CAAGCAGATGTTGAAGATCTCCCTCCCTCCCTTTCTTCTTCTCTCCCTCC
CTCCCTCCCTCCCTCCCTTTACTCCTCAGGGAGCGCTTGGACGGCTACTC
TGTCGATTGACGAGAGGACGTACCGTATCGAGGAGCCTGTGTCGTCCATA
AAGGTGGGGAGGGAGGGTGGAAAGGGGATTGGAATCCATGCACGCTATTC
GTGATTGACGCTCTCACATATCACCGGCATCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCTTCCCTCAGGTCGCCAAGCAGACCATCTGCGAGATGGTCT
TGAAGGACATGGCTCCCGAAGCGTATCTCTCCTACTTCCCTCCCAAGGAG
GAGGAGGAAGAATGTAAGGAGGGAGGGAGGGAGGGAGTGATGATGACTAG
CTCTGCAGTCGTGTCTACAACTTACGCTCTACCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCCTCCCTCCCTCCCCCCTTCCAAAGGCGATCCCTC
GGCCGACCCGAACGAGGAGGACGAGGACGAGGACGAGGACGAGGACGGAG
GGGAGGGCGGGAGGGAGGGCGGGGGGGAGGACGCGATTGTGGATTGGCGG
CACGAGGAGAAGATGTTCGACGAGGAAAGCTACCTGAAAGGGCTCCTGTG
GAACGTACAGATGTACGTCGACGGCTACTGCCCCGACTACCAATTCGCCT
ACAGGTATCATGGCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCGCTC
GACTCTCCTTCGGGGGGGGATGTCGCAACATGTTGTCCCTCCCTCCCTCC
CTCCCTCCCTCCTTCCCTCCCTCCTTCCCTCCCTCCCTCCCTCCATGTAT
CCCTTTGTCGATTCTCTCCCTCTCCCCTGTTCCACATCCCTCCCCCCCTC
CCTCCCTTCCTCTCTCCAGGTACCGCTTCGCCCCCTCTGCCAGCTCCCTC
GCCGGCTTCATCCGCAACAACACACGGGACAATCCGTCCTTCCGTCTGGA
CGTTCCGATCTCTCACGAATCCCCCCTCCATCCCGCCCTCGCATGCCTAG
CCGTCATGCCAAGGTAGCCTTCCCCTCCCCCTCCCTCCCTCATTCCCTCC
CTCCCTCCTTTCCTTCCTTCCTCCCTGCCCTTCTTTTGTTCAAAATGAAA
CTTGAGAGTCACAATTTCACTTTCTTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCCACAGGTGGGGCCTGCACCTAGTGCCT
TCCAACCTGTCGTCGGTATTAAGCTCGTCCGCCCGGGTGGATGGCATGTA
CGAGACAGACGCACCCTTCAGCTTGGACGTTCTGATTGGTGAGGAGGGAG
GGAGGGAGGGAGGGAAGGAGGGAGAGAGGAAGGACTCGGCCAGCATCTCC
ATCGTTCACCTCCCTCATCCATTTCTCTACCCCTCCCTCCTTCCCTCCTT
CCCTCCCTCCTTCCCTCCCTCAGACGCCGTAAATGTCTCCCATGCCCACC
TCATTAAATCCCAGCATTTTCACTGGACCGAGGTCGTCGCCTCGCCCCCT
TCCTCTCCCTCCCTCCCTGCATCACCCCCTCCCTCGTCCTCCTCCTCCCA
CCTCCCTCCCTCCCGCCCTCATGCCTCATCGAGGTCAAGGAAAGTCGCTG
CGACGCAGAGCCCCCCCTTGCGATCGTGGGTGAAGGCCGCCCATCTCTTT
ACCCCCACCCCCCATAGCAAGCGGTGGAAAAACGCCGTGAAGAGGGAGGG
AGGGAGGGAGGGAGGGAGGGAGGGAGGGTGGGGGGCTGGGAGCGGTGGTG
TAGGGGGATGGAGGGGGGGGCGGAAGAATACCGTTGGGAAGGAGGGGAGG
ATAGGAGGAGCAGGAGCGGGTAGTGGAGGAGCAGGAGGTCGAGGAGGAGG
AGGAGGAGGAGGAGAAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGGAAAG
AAGGAGGGGGAGAAAGCCGGCATATAATGACGAAAAAGCGGAAGGAGGGA
GGGAGAGAGGGAGGAGGGGAAGGTTTCAAGCCGAAGAAAGGAGACAAGAA
GGGCGCCCACCCTCCCTCCCTCCCAAAAATGGGAACCCAGCCCTCCTCCT
CCCCCGCTACCATCTTGCTCGATGGCGCGCAAGTCTTGCCGCCTCCCTCC
CCGCCCGCCCTCCATCCCTCCCCCTCCTCCTCCTCCTCTTCGCTCCCTCG
GGCTCCGACCAAAAACGTTTCGACCCTTAAAGCAAGCGAGGAGGATACGA
ACAGTGAGCCTTCCTTCCCTTCCTCCCTCCCGCCTAAGAAGAGAGGCCGG
CCTCGATCGGCACCCAAGGCCCATTTGATGTGGGGAGCAGCAGCGGCAGC
AGCAGGAGCAGGAGCAGGAGAAGCGTTGCTTCGTGCTTCTTGTCGGCCCG
GGGTCTTTCGCCCTCATTTTTAG

Coding sequence (CDS) from alignment at chr15:125282..131304+

>NO15G00380.1 ID=NO15G00380.1|Name=NO15G00380.1|organism=Nannochloropsis oceanica|type=CDS|length=2826bp|location=Sequence derived from alignment at chr15:125282..131304+ (Nannochloropsis oceanica)
ATGCCCTTTCTCCTCCTCTTTTTACTGCTCGTCGCGGGCTTAAGGCCGGT
GGATGGCGGGATATACGGGTTTTGGAAGTGGTTCCGAGGCCACTACAAGG
ACGTTGTTGCCAAGGTGGGCTGTGACCAATACGCGGAATTCGATCATGTG
CTCATCGATGTCAATCAGCTCACGCACATGGCGGCGCGCAAAGCCAAGGA
TGAGGACCACGCCATCCGCCGCCTCCTCAAGGAACTCGGTCGAACCCTGC
GGGTACTCCGCGCGCGAAAATCCGTCGTCATTGCTTTTGATGGTCCTGCG
CCCCTGGCCAAAATCATCACTCAACGGAAAAGACGGTCGTCGGAGAAGGA
GTTGAACACCGTCATCAATTCCCTGCACCTCAGTCCCGGCACTGCCTTCA
TGCGTCGAGCTGCTGACGCCATCATTCAGTTTTGTCACACACGCATCGAA
ACAGACACACGTCCCCGTCGGGGTCTTCGGTACTACATTTCCTGCTCCGA
ATGTCCAGGCGAAGGCGAGGTCAAGCTCATGGACTGGATCAACACCTTCA
TGATGCCCCCGGAGGAGGAGAAAGAGGAGGACGAGGAGAAGGGAGGGGGG
GAGAAAGTGCAGGAGGGAGCGGGGGAGGAGGGAGGCAAGGAAGGGATGAC
AGTGCGACAAGAGAAGACGAAGAAACAGCAGCAGTATGACAAACACCAGC
AGCAGAAAAAATTCAAGAAAAGGCGATACGGCTACTCGGACTCGGATAGC
GTCGTGGTGGTGGGTGGAGATGCCGATTTGGTCCTACAGGGCCTCGCCCT
CCCTGGCCTTCCCGATTTTAACGTCTTCATCCCGGATATTAAACGTTCGG
GATATTTCGTCTCCTTACGTCAGTTTATCGCCCGGCTTGAAAAAGACTTC
CCGGGCCAGTCTCACAACGTCCGTAACGATATGGTCCTCCTCCTCGTCAT
GGCCGGTAACGATTATTTGAAAAAAGTCCGAGGCCTCACCTTCCGGAACA
AGCTCATGGCTTACAGCAACATCAAGAAACGGCCCGAGTTTAAAAATCAG
TTTATGCTTCTCCCACAGAACAAGACCTTCAACTGGCCCTTCCTCCAGGC
CTTCTACGACGACCTTGCCTCCCGCTCCTACGTCGATGATATTTCCACTC
TCCTCCGCGGACCTACACCTGCCGGTGTCCTCAATGAGCTCATGCAGAAG
AAGATCCTGCCCCCCTTCCTCCTCGAGTTCCAAGGTGAAGGGAGCGCTTG
GACGGCTACTCTGTCGATTGACGAGAGGACGTACCGTATCGAGGAGCCTG
TGTCGTCCATAAAGGTCGCCAAGCAGACCATCTGCGAGATGGTCTTGAAG
GACATGGCTCCCGAAGCGTATCTCTCCTACTTCCCTCCCAAGGAGGAGGA
GGAAGAATGCGATCCCTCGGCCGACCCGAACGAGGAGGACGAGGACGAGG
ACGAGGACGAGGACGGAGGGGAGGGCGGGAGGGAGGGCGGGGGGGAGGAC
GCGATTGTGGATTGGCGGCACGAGGAGAAGATGTTCGACGAGGAAAGCTA
CCTGAAAGGGCTCCTGTGGAACGTACAGATGTACGTCGACGGCTACTGCC
CCGACTACCAATTCGCCTACAGGTACCGCTTCGCCCCCTCTGCCAGCTCC
CTCGCCGGCTTCATCCGCAACAACACACGGGACAATCCGTCCTTCCGTCT
GGACGTTCCGATCTCTCACGAATCCCCCCTCCATCCCGCCCTCGCATGCC
TAGCCGTCATGCCAAGGTGGGGCCTGCACCTAGTGCCTTCCAACCTGTCG
TCGGTATTAAGCTCGTCCGCCCGGGTGGATGGCATGTACGAGACAGACGC
ACCCTTCAGCTTGGACGTTCTGATTGACGCCGTAAATGTCTCCCATGCCC
ACCTCATTAAATCCCAGCATTTTCACTGGACCGAGGTCGTCGCCTCGCCC
CCTTCCTCTCCCTCCCTCCCTGCATCACCCCCTCCCTCGTCCTCCTCCTC
CCACCTCCCTCCCTCCCGCCCTCATGCCTCATCGAGGTCAAGGAAAGTCG
CTGCGACGCAGAGCCCCCCCTTGCGATCGTGGGTGAAGGCCGCCCATCTC
TTTACCCCCACCCCCCATAGCAAGCGGTGGAAAAACGCCGTGAAGAGGGA
GGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGTGGGGGGCTGGGAGCGGTG
GTGTAGGGGGATGGAGGGGGGGGCGGAAGAATACCGTTGGGAAGGAGGGG
AGGATAGGAGGAGCAGGAGCGGGTAGTGGAGGAGCAGGAGGTCGAGGAGG
AGGAGGAGGAGGAGGAGAAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGGA
AAGAAGGAGGGGGAGAAAGCCGGCATATAATGACGAAAAAGCGGAAGGAG
GGAGGGAGAGAGGGAGGAGGGGAAGGTTTCAAGCCGAAGAAAGGAGACAA
GAAGGGCGCCCACCCTCCCTCCCTCCCAAAAATGGGAACCCAGCCCTCCT
CCTCCCCCGCTACCATCTTGCTCGATGGCGCGCAAGTCTTGCCGCCTCCC
TCCCCGCCCGCCCTCCATCCCTCCCCCTCCTCCTCCTCCTCTTCGCTCCC
TCGGGCTCCGACCAAAAACGTTTCGACCCTTAAAGCAAGCGAGGAGGATA
CGAACAGTGAGCCTTCCTTCCCTTCCTCCCTCCCGCCTAAGAAGAGAGGC
CGGCCTCGATCGGCACCCAAGGCCCATTTGATGTGGGGAGCAGCAGCGGC
AGCAGCAGGAGCAGGAGCAGGAGAAGCGTTGCTTCGTGCTTCTTGTCGGC
CCGGGGTCTTTCGCCCTCATTTTTAG

Synonyms

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