NO14G02140, NO14G02140 (gene) Nannochloropsis oceanica

Overview
NameNO14G02140
Unique NameNO14G02140
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2280
Alignment locationchr14:645512..647791 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:645512..647791 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO14G02140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002431NSK002431Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G02140.1NO14G02140.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|37426gene_5791Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G02140.1NO14G02140.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G02140 ID=NO14G02140|Name=NO14G02140|organism=Nannochloropsis oceanica|type=gene|length=2280bp
ATGGCAGCGACGGCAACCAGCTCCAGCAGCTTTTCCTTGCGGGACGTGAA
ACTAGACGACCTCTTGGCAGGCACGGGGCCCTATACAGGCTTGCAAAAGA
GTGTTCGTCTCACCTTCAAGTGTCTCACACAAGCCATACAGCAACAAGCG
AATGAGATGACCAAATTTTACGAGCAGCAAACCCGTCACAACTTGGAAAT
GGCGGCCCTCCAAGAGCAAGTCCAGACAAGCGCCGTCTCCATGCGCACCG
TCCGCACGCTGCTTGAAGGGCATGTAGAGGCGTTGCGAGCCGAGTTTTCA
CCGAAATTGCGAGGGCTTGAGGCCCGTGTTCAGGATATGGGGTCTCGCTT
AGTGGACGTTGAGCAGCAACAGCAGCGCCACTACCGCCGGTACCACTTTC
AAGAAGACCACAGTGCCAGCAGCAACAAAGAAGACAACATCCACCAAGTC
ACGCTGCATGTGGAGCGAATGCAAGCGGATTTGACCCGGCTGGCCCGTAC
AGTGGAGAGGAAGGCCGATCAGGAGGAAGTAGCGGCGGCCCTCCAGCAAA
GGGTTAATAAAGCCTCGCTTGCCAAGCGCATACATACCATCCTGGAAGAA
GACGAGCAGAACATCAACAACCGCAAAAGTGCCCGCAGTACTGGCAATAG
CACGGCCTTGATGACTGCGCATCAGCGTCTCAAAATGAAGCTTGCAGATC
AGGAAGAAGTAGTCCTCCGAATTCTCCAAGAAATGGAGGCAGTCAAAACC
TACGTGCTTGGCAGTGGGGACAAGGCCAATGGAGGGGGGGAAGATTCAAT
CACCACTATTATGAATAACCTGCAGAGCATGTTGCAGCAGCAAGGGCGAA
GGCTGCATCGAACGGAAAAGGACGTGGCTGGGCTGAGAGATCGTCTGCTT
CAGGATCATGCTGCGCTTGACACCAAGGTAGAGGAGCGGTGTCGTGCCCT
CCAACAGCAGCACCATGAGCAGCAGGAACAGCATCAGCAATTAGCCTGTG
TAGTGAGTAACATAGAGGTGGAGAGGAAGGAGGCTATGCCGCCACTGACG
ACGACGACAACAACCGCGGTGCTGGCTTTGGAAGAGCGTGTTAGAGCATT
CGAAAGTAACATTGTCAAGGAGTTGGATGTGCGCGATGCCGAAGTTCGTC
GGCACCTGGACAGTGCCAACCGTAACATCCGCGCCTTAGAAGCCAAAGTG
CAATGTGAGGAAAGTAGGGTCGAAGAGCGGTTGAACAAGGCTGAGGACTC
GGTAGCTTTCCAATCAGGTCAACGCCTTCATGTCCTCCGCAGAGTCGAGC
GCCTGGAGCAGCAACAGCTGAACCTTACAGCTGGTGTCAGCACCGCAAGA
GTCCGCTCTTCTTCCTCGGCCCGCTCTCCCATCAGTATCGGGCATGCTCC
CACTATTTCCCCCGCGGCCACTTCGGCGGCTGTTCGATCGTTCAACTATT
TTAGCACCCCTGACCCCTTGCGAGCCTATCAGAACGTGCAACAGCAAGAA
CAGCAACAGCAACCGCAACTTCAATGGCAGCAGCAGCACCACCACCACCA
CCAAGCACCACAGCATTCGCCCCCATCATTGGCACAGGCTCGCTTACCTT
TGCCTGTTGGTGGATTGGGGGGGTATCGCGGGACGGGAGCACCACCATTA
CCACCTGCAGGAGGAGATGGTGGAGGAAGTGGAGGAGGAGGTACATCAAT
CATACCTGCCCGGCCCAGCACCAGCACCATGACCTTAAAACCAGAGTACG
GCAGGACAGGAACTCTATCATTGTCGTCCTCACTACCATCATCTGCTCCT
GCTCCTCCTTCTCGCACCCATCTCCAGGCGACCGAGCACCCACACCAACA
ACGACAGAAGCATTACTCCCGGGATAACTCTTTGTCACAACATCCACCGC
CTCCTCTACTTGCATCGCCAGAATCCCTCCTTCCCCATCACCTCTATCAG
CAGCAGGAGCAGCCACCTCACGCGGCATGGCCAGTTGCCGCCAGTGCTGG
CACGGGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGAAGGAGAGAGGG
AAGCTGGATTTGCAGAAAGTAAACAGGCCACAGGTGGTATTTCAGCAGCC
TGGTGCGGCAGTCTTACCACCGCTTCTTCTCCAGGAAGTCCAACTCCAGG
AGAGAGGGAGGGAAGGAGCGCGACTTCGACGGGTGGCATGAATTACAGTC
TGGAGAAGTTGGAGGCCTTGCGAGTGGAGAAGTTGGCGTTGCGGACGAGG
ATAGTAGAGGAGATGTGTCAGCGCAATTGA
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protein sequence of NO14G02140.1

>NO14G02140.1-protein ID=NO14G02140.1-protein|Name=NO14G02140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=760bp
MAATATSSSSFSLRDVKLDDLLAGTGPYTGLQKSVRLTFKCLTQAIQQQA
NEMTKFYEQQTRHNLEMAALQEQVQTSAVSMRTVRTLLEGHVEALRAEFS
PKLRGLEARVQDMGSRLVDVEQQQQRHYRRYHFQEDHSASSNKEDNIHQV
TLHVERMQADLTRLARTVERKADQEEVAAALQQRVNKASLAKRIHTILEE
DEQNINNRKSARSTGNSTALMTAHQRLKMKLADQEEVVLRILQEMEAVKT
YVLGSGDKANGGGEDSITTIMNNLQSMLQQQGRRLHRTEKDVAGLRDRLL
QDHAALDTKVEERCRALQQQHHEQQEQHQQLACVVSNIEVERKEAMPPLT
TTTTTAVLALEERVRAFESNIVKELDVRDAEVRRHLDSANRNIRALEAKV
QCEESRVEERLNKAEDSVAFQSGQRLHVLRRVERLEQQQLNLTAGVSTAR
VRSSSSARSPISIGHAPTISPAATSAAVRSFNYFSTPDPLRAYQNVQQQE
QQQQPQLQWQQQHHHHHQAPQHSPPSLAQARLPLPVGGLGGYRGTGAPPL
PPAGGDGGGSGGGGTSIIPARPSTSTMTLKPEYGRTGTLSLSSSLPSSAP
APPSRTHLQATEHPHQQRQKHYSRDNSLSQHPPPPLLASPESLLPHHLYQ
QQEQPPHAAWPVAASAGTGGGGGGGGGGGEGEREAGFAESKQATGGISAA
WCGSLTTASSPGSPTPGEREGRSATSTGGMNYSLEKLEALRVEKLALRTR
IVEEMCQRN*
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Synonyms
Publications