jgi.p|Nanoce1779_2|37426, gene_5791 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|37426
Unique Namegene_5791
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_11:578297..580848 +

Link to JBrowse

Properties
Property NameValue
TranscriptId37512
ProteinId37426
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_11supercontigscaffold_11:578297..580848 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL069ncniL069Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G02140NO14G02140Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|37426mRNA_5791-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|37426mRNA_5791Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|37426

>mRNA_5791-protein ID=mRNA_5791-protein|Name=jgi.p|Nanoce1779_2|37426|organism=Nannochloropsis oceanica|type=polypeptide|length=762bp
MMAATATSSSSFSLRDVKLDDLLAGTGPYTGLQKSVRLTFKCLTQAIQQQ
ANEMTKFYEQQTRHNLEMAALQEQVQTSAVSMRTVRTLLEGHVEALRAEF
SPKLRGLEARVQDMGSRLVDVEQQQQRHYRRYHFQEDHSASSNKEDNIHQ
VTLHVERMQADLTRLARTVERKADQEEVAAALQQRVNKASLAKRIHTILE
EDEQNINNRKSARSTGNSTALMTAHQRLKMKLADQEEVVLRILQEMEAVK
TYVLGSGDKANGGGEDSITTIMNNLQSMLQQQGRRLHRTEKDVAGLRDRL
LQDHAALDTKVEERCRALQQQHHEQQEQHQQLACVVSNIEVERKEAMPPL
TTTTTTAVLALEERVRAFESNIVKELDVRDAEVRRHLDSANRNIRALEAK
VQCEESRVEERLNKAEDSVAFQSGQRLHVLRRVERLEQQQLNLTAGVSTA
RVRSSSSARSPISIGHAPTISPAATSAAVRSFNYFSTPDPLRAYQNVQQQ
EQQQQPQLQWQQQHHHHHQAPQHSPPSLAQARLPLPVGGLGGYRGTGAPP
LPPAGGDGGGSGGGGTSIIPARPSTSTMTLKPEYGRTGTLSLSSSLPSSA
PAPPSRTHLQATEHPHQQRQKHYSRDNSLSQHPPPPLLASPESLLPHHLY
QQQEQPPHAAWPVAASAGTGGGGGGGGGGGGEGEREAGFAESKQATGGIS
AAWCGSLTTASSPGSPTPGEREGRSATSTGGMNYSLEKLEALRVEKLALR
TRIVEEMCQRN*
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Synonyms
Publications