NO14G01890, NO14G01890 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO14G01890
Unique Name	NO14G01890
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2877
Alignment location	chr14:581017..583893 +

Link to JBrowse

Properties


Property Name	Value
Description	Galactose-binding protein

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr14	genome	chr14:581017..583893 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008979	Galactose-bd-like
IPR012919	SUN_dom

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane
GO:0016020	membrane

Homology

[Close]

BLAST of NO14G01890 vs. NCBI_GenBank
Match: XP_008877163.1 (hypothetical protein H310_12031 [Aphanomyces invadans] >ETV94398.1 hypothetical protein H310_12031 [Aphanomyces invadans])

HSP 1 Score: 136.3 bits (342), Expect = 4.800e-28
Identity = 68/148 (45.95%), Postives = 94/148 (63.51%), Query Frame = 0

Query:  249 NYAAEKAGAVVLQSSSSLVGAKNLLDDDKDKYARSPCA-ESKWVIINLSEDIRIHALVLANYEKFSSMVKDFQVWYSVKCPSLDGEEDSEGWLELGSFEARQKTGEQRFVVDPPRYARYLKVRLVSHWSREFYCTLSQIKVLGSTLQQ 396
            NYA++ +GA VL  +    G+ NLL  DKD+Y   PCA E KWV+++LSEDI   A+ +ANYEKFSS  +DF V  S+  P       S+ W+ LG+F A  + GEQ F      + RY+K+R++SH+  E+YCT+SQI+V G T  Q
Sbjct:  117 NYASKDSGATVLDHAPGTKGSVNLLVPDKDRYMLIPCASEKKWVVVSLSEDIHADAIAIANYEKFSSPTRDFLVLGSINYP-------SDTWVVLGNFTASHRNGEQLFEFHESHHVRYIKLRMMSHYGSEYYCTMSQIRVFGRTFTQ 257

[Close]

BLAST of NO14G01890 vs. NCBI_GenBank
Match: XP_008877160.1 (hypothetical protein, variant 1 [Aphanomyces invadans] >ETV94399.1 hypothetical protein, variant 1 [Aphanomyces invadans])

HSP 1 Score: 136.3 bits (342), Expect = 4.800e-28
Identity = 68/148 (45.95%), Postives = 94/148 (63.51%), Query Frame = 0

Query:  249 NYAAEKAGAVVLQSSSSLVGAKNLLDDDKDKYARSPCA-ESKWVIINLSEDIRIHALVLANYEKFSSMVKDFQVWYSVKCPSLDGEEDSEGWLELGSFEARQKTGEQRFVVDPPRYARYLKVRLVSHWSREFYCTLSQIKVLGSTLQQ 396
            NYA++ +GA VL  +    G+ NLL  DKD+Y   PCA E KWV+++LSEDI   A+ +ANYEKFSS  +DF V  S+  P       S+ W+ LG+F A  + GEQ F      + RY+K+R++SH+  E+YCT+SQI+V G T  Q
Sbjct:  117 NYASKDSGATVLDHAPGTKGSVNLLVPDKDRYMLIPCASEKKWVVVSLSEDIHADAIAIANYEKFSSPTRDFLVLGSINYP-------SDTWVVLGNFTASHRNGEQLFEFHESHHVRYIKLRMMSHYGSEYYCTMSQIRVFGRTFTQ 257

[Close]

BLAST of NO14G01890 vs. NCBI_GenBank
Match: XP_008877161.1 (hypothetical protein, variant 3 [Aphanomyces invadans] >XP_008877162.1 hypothetical protein, variant 2 [Aphanomyces invadans] >ETV94400.1 hypothetical protein, variant 2 [Aphanomyces invadans] >ETV94401.1 hypothetical protein, variant 3 [Aphanomyces invadans])

HSP 1 Score: 136.3 bits (342), Expect = 4.800e-28
Identity = 68/148 (45.95%), Postives = 94/148 (63.51%), Query Frame = 0

Query:  249 NYAAEKAGAVVLQSSSSLVGAKNLLDDDKDKYARSPCA-ESKWVIINLSEDIRIHALVLANYEKFSSMVKDFQVWYSVKCPSLDGEEDSEGWLELGSFEARQKTGEQRFVVDPPRYARYLKVRLVSHWSREFYCTLSQIKVLGSTLQQ 396
            NYA++ +GA VL  +    G+ NLL  DKD+Y   PCA E KWV+++LSEDI   A+ +ANYEKFSS  +DF V  S+  P       S+ W+ LG+F A  + GEQ F      + RY+K+R++SH+  E+YCT+SQI+V G T  Q
Sbjct:  117 NYASKDSGATVLDHAPGTKGSVNLLVPDKDRYMLIPCASEKKWVVVSLSEDIHADAIAIANYEKFSSPTRDFLVLGSINYP-------SDTWVVLGNFTASHRNGEQLFEFHESHHVRYIKLRMMSHYGSEYYCTMSQIRVFGRTFTQ 257

[Close]

BLAST of NO14G01890 vs. NCBI_GenBank
Match: ONK73189.1 (uncharacterized protein A4U43_C04F28200 [Asparagus officinalis])

HSP 1 Score: 136.3 bits (342), Expect = 4.800e-28
Identity = 65/155 (41.94%), Postives = 102/155 (65.81%), Query Frame = 0

Query:  247 EVNYAAEKAGAVVLQSSSSLVGAKNLLDDDKDKYARSPCA-ESKWVIINLSEDIRIHALVLANYEKFSSMVKDFQVWYSVKCPSLDGEEDSEGWLELGSFEARQKTGEQRFVVDPPRYARYLKVRLVSHWSREFYCTLSQIKVLGSTLQQGFMDD 401
            E NYA+ K GA VL S+    GA N+LD DKDKY R+PC+ E K+V+I LSE+  +  + + ++E +SS +KDF+++ S+  P       S+ W++LG+F A+    +QRF +  P++ARYLK+ ++SH+  EFYCTLS ++V G    +  ++D
Sbjct:  198 EYNYASAKRGAKVLDSNKEAKGASNILDKDKDKYLRNPCSVEEKYVVIELSEETLVDTIEIGSFEHYSSKLKDFELYSSMVYP-------SDNWVKLGNFTAQNVKHKQRFALSEPKWARYLKLNMLSHYGSEFYCTLSVVEVYGVDAVERMLED 345

[Close]

BLAST of NO14G01890 vs. NCBI_GenBank
Match: XP_020261999.1 (uncharacterized protein slp1 [Asparagus officinalis])

HSP 1 Score: 136.3 bits (342), Expect = 4.800e-28
Identity = 65/155 (41.94%), Postives = 102/155 (65.81%), Query Frame = 0

Query:  247 EVNYAAEKAGAVVLQSSSSLVGAKNLLDDDKDKYARSPCA-ESKWVIINLSEDIRIHALVLANYEKFSSMVKDFQVWYSVKCPSLDGEEDSEGWLELGSFEARQKTGEQRFVVDPPRYARYLKVRLVSHWSREFYCTLSQIKVLGSTLQQGFMDD 401
            E NYA+ K GA VL S+    GA N+LD DKDKY R+PC+ E K+V+I LSE+  +  + + ++E +SS +KDF+++ S+  P       S+ W++LG+F A+    +QRF +  P++ARYLK+ ++SH+  EFYCTLS ++V G    +  ++D
Sbjct:  198 EYNYASAKRGAKVLDSNKEAKGASNILDKDKDKYLRNPCSVEEKYVVIELSEETLVDTIEIGSFEHYSSKLKDFELYSSMVYP-------SDNWVKLGNFTAQNVKHKQRFALSEPKWARYLKLNMLSHYGSEFYCTLSVVEVYGVDAVERMLED 345

[Close]

BLAST of NO14G01890 vs. NCBI_GenBank
Match: POM67719.1 (Hypothetical protein PHPALM_16227 [Phytophthora palmivora var. palmivora])

HSP 1 Score: 136.3 bits (342), Expect = 4.800e-28
Identity = 73/186 (39.25%), Postives = 108/186 (58.06%), Query Frame = 0

Query:  249 NYAAEKAGAVVLQSSSSLVGAKNLLDDDKDKYARSPCAE-SKWVIINLSEDIRIHALVLANYEKFSSMVKDFQVWYSVKCPSLDGEEDSEGWLELGSFEARQKTGEQRFVVDPPRYARYLKVRLVSHWSREFYCTLSQIKVLGSTLQQGFMDDWQKQKLNLGSQLEVIDPAATVDGERSSIISNQT 434
            NYA+  AGA +L ++       NLL  DKD+Y  +PC+   KWV+I+LSED+   A+ +ANYEKFSS VKDF V  SV  P       ++ WL LG+F A    GEQ F +D  ++ RY+K R +SH+  E+YCTLSQ++V G T  Q       + + ++ +++E +D    +   + S +   T
Sbjct:  123 NYASLDAGATILDAAPDTKSPTNLLVPDKDRYMLTPCSNPRKWVVISLSEDVHADAIAVANYEKFSSPVKDFIVLGSVNYP-------TDTWLVLGNFTAAHTNGEQIFELDAQQHVRYIKFRFLSHYGSEYYCTLSQLRVFGRTFTQVI----SQLEKSIDAEVEALDVQPAIPAPQLSALPEST 297

[Close]

BLAST of NO14G01890 vs. NCBI_GenBank
Match: XP_020704711.1 (uncharacterized protein slp1-like [Dendrobium catenatum] >XP_020704712.1 uncharacterized protein slp1-like [Dendrobium catenatum] >XP_020704713.1 uncharacterized protein slp1-like [Dendrobium catenatum] >XP_020704714.1 uncharacterized protein slp1-like [Dendrobium catenatum] >PKU83326.1 hypothetical protein MA16_Dca020246 [Dendrobium catenatum])

HSP 1 Score: 136.0 bits (341), Expect = 6.300e-28
Identity = 68/156 (43.59%), Postives = 100/156 (64.10%), Query Frame = 0

Query:  247 EVNYAAEKAGAVVLQSSSSLVGAKNLLDDDKDKYARSPC-AESKWVIINLSEDIRIHALVLANYEKFSSMVKDFQVWYSVKCPSLDGEEDSEGWLELGSFEARQKTGEQRFVVDPPRYARYLKVRLVSHWSREFYCTLSQIKVLGSTLQQGFMDDW 402
            E NYAA   GA VL  +    GA N+LD D D+Y R+PC AE K+V+I LSE+  + +L +AN+E +SS +KDF++  S+  P       ++ W++LG+F A+     QRFV+  P++ARYLK  L+SH+  EFYCTLS ++V G    +  ++DW
Sbjct:  193 EYNYAAATKGAKVLAFNKEAKGASNILDKDADRYLRNPCSAEEKYVVIELSEETLVDSLEIANFEHYSSNLKDFELSSSLVYP-------TDNWVKLGNFTAQNVKHTQRFVLPEPKWARYLKFNLLSHYGSEFYCTLSVVQVYGVDAVERMLEDW 341

[Close]

BLAST of NO14G01890 vs. NCBI_GenBank
Match: XP_008606849.1 (hypothetical protein SDRG_03011 [Saprolegnia diclina VS20] >EQC39577.1 hypothetical protein SDRG_03011 [Saprolegnia diclina VS20])

HSP 1 Score: 135.2 bits (339), Expect = 1.100e-27
Identity = 70/148 (47.30%), Postives = 93/148 (62.84%), Query Frame = 0

Query:  249 NYAAEKAGAVVLQSSSSLVGAKNLLDDDKDKYARSPC-AESKWVIINLSEDIRIHALVLANYEKFSSMVKDFQVWYSVKCPSLDGEEDSEGWLELGSFEARQKTGEQRFVVDPPRYARYLKVRLVSHWSREFYCTLSQIKVLGSTLQQ 396
            NYA++ +GA VL  +    G+ NLL  DKD+Y   PC A+ KW++I+LSEDI   A+ +ANYEKFSSM K+F V  S+  P       ++ W+ LG F A  K G+Q F      + RYLK+RL SH+  E+YCT+SQIKV G T  Q
Sbjct:   96 NYASKDSGATVLDHAPGTKGSVNLLVPDKDRYMLIPCSADKKWIVISLSEDIHADAISIANYEKFSSMTKEFLVLGSINYP-------TDTWVVLGHFTALHKNGDQLFHFQEKHHVRYLKLRLNSHYGAEYYCTMSQIKVYGRTFTQ 236

[Close]

BLAST of NO14G01890 vs. NCBI_GenBank
Match: XP_024572668.1 (Uncharacterized conserved protein [Plasmopara halstedii] >CEG36299.1 Uncharacterized conserved protein [Plasmopara halstedii])

HSP 1 Score: 135.2 bits (339), Expect = 1.100e-27
Identity = 73/186 (39.25%), Postives = 108/186 (58.06%), Query Frame = 0

Query:  249 NYAAEKAGAVVLQSSSSLVGAKNLLDDDKDKYARSPCAES-KWVIINLSEDIRIHALVLANYEKFSSMVKDFQVWYSVKCPSLDGEEDSEGWLELGSFEARQKTGEQRFVVDPPRYARYLKVRLVSHWSREFYCTLSQIKVLGSTLQQGFMDDWQKQKLNLGSQLEVIDPAATVDGERSSIISNQT 434
            NYA+  AGA VL ++       NLL  DKD+Y   PC+++ KWV+I+LSED+   A+ +ANYEKFSS VK+F V  SV  P       ++ WL LG+F A    GEQ F +D  ++ RY+K R +SH+  E+YCTLSQ++V G T  Q       + + ++ +++E +D        +   +S  T
Sbjct:  114 NYASLDAGATVLDAAPDTKSPTNLLVPDKDRYMLIPCSKARKWVVISLSEDVHADAIAIANYEKFSSPVKEFIVLGSVNYP-------TDTWLVLGNFTASDTNGEQIFQLDAQQHVRYIKFRFLSHYGSEYYCTLSQLRVFGRTFTQVI----SQLEKSIDAEVEALDAQTAASTPQLPTVSENT 288

[Close]

BLAST of NO14G01890 vs. NCBI_GenBank
Match: OQR93004.1 (hypothetical protein ACHHYP_03034 [Achlya hypogyna])

HSP 1 Score: 135.2 bits (339), Expect = 1.100e-27
Identity = 69/148 (46.62%), Postives = 93/148 (62.84%), Query Frame = 0

Query:  249 NYAAEKAGAVVLQSSSSLVGAKNLLDDDKDKYARSPCA-ESKWVIINLSEDIRIHALVLANYEKFSSMVKDFQVWYSVKCPSLDGEEDSEGWLELGSFEARQKTGEQRFVVDPPRYARYLKVRLVSHWSREFYCTLSQIKVLGSTLQQ 396
            NYA++ +GA VL  +    G+ NLL  DKD+Y   PC+ + KW++I+LSEDI   A+ +ANYEKFSSM K+F V  S+  P       ++ W+ LG F A  + GEQ F      + RYLK+RL SH+  E+YCT+SQIKV G T  Q
Sbjct:   85 NYASKDSGATVLDHAPGTKGSVNLLVPDKDRYMLIPCSTDKKWIVISLSEDIHAEAIAIANYEKFSSMTKEFLVLGSINYP-------TDTWVVLGHFTALHRNGEQLFNFHEKHHVRYLKLRLNSHYGAEYYCTMSQIKVFGRTFTQ 225

The following BLAST results are available for this feature:

BLAST of NO14G01890 vs. NCBI_GenBank

BLAST of NO14G01890 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
XP_008877163.1	4.800e-28	45.95	hypothetical protein H310_12031 [Aphanomyces invad...	[more]
XP_008877160.1	4.800e-28	45.95	hypothetical protein, variant 1 [Aphanomyces invad...	[more]
XP_008877161.1	4.800e-28	45.95	hypothetical protein, variant 3 [Aphanomyces invad...	[more]
ONK73189.1	4.800e-28	41.94	uncharacterized protein A4U43_C04F28200 [Asparagus...	[more]
XP_020261999.1	4.800e-28	41.94	uncharacterized protein slp1 [Asparagus officinali...	[more]
POM67719.1	4.800e-28	39.25	Hypothetical protein PHPALM_16227 [Phytophthora pa...	[more]
XP_020704711.1	6.300e-28	43.59	uncharacterized protein slp1-like [Dendrobium cate...	[more]
XP_008606849.1	1.100e-27	47.30	hypothetical protein SDRG_03011 [Saprolegnia dicli...	[more]
XP_024572668.1	1.100e-27	39.25	Uncharacterized conserved protein [Plasmopara hals...	[more]
OQR93004.1	1.100e-27	46.62	hypothetical protein ACHHYP_03034 [Achlya hypogyna...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL140	nonsL140	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
nonsL138	nonsL138	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR069	ncniR069	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR025	ngnoR025	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR023	ngnoR023	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK002387	NSK002387	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO14G01890.1	NO14G01890.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|590221	gene_5760	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100117g9	gene5858	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO14G01890.1	NO14G01890.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO14G01890 ID=NO14G01890|Name=NO14G01890|organism=Nannochloropsis oceanica|type=gene|length=2877bp
ATGTCACACACTGACGACGCCATGGAGAAACTAGACTACAGCGGCAGCTT
TAGCAACAGTAGCATCCCTGACCGTACCAGCAGCGCCACAACCCCCACTC
GCCTTCCCACCAGCAGCAGCTCGAGTGGACCCCTCAGTGGCGGCCGCCCG
CCCTTGCGGATGGGGCTTTTGTTTGTCCTCGCCTTGGTCTTCATGACGGT
GGCGCACGGGGGCTCCACTGGGCATGAAAATCTTACCCCGGATGTTGATG
CTTCAGTCGGGTCGTCCACTCCATCTCCCCCCTCCTCAACTCACACGCCG
CCGCCGCCCATGACAACCCCACCTGAAAGCGGCGGGAGCACAGGGCCTAC
CGGCGGCTTCAAGATTTTAGAGAGCTTGTTGGGTGGAAAGGGTACTAAGT
CTAGCAAGCAAGCAACCGCCGCGAGTTTAGCCAACCAGCCCGCTCCTACT
GGGAATGCGGAGGAAAAGGAGGAGCTGGCTGCAGCCTCTCTAGTCTCGTT
ACAGGGGCATGGTGACAGCATCGTGTCGGATGTAGAAAGTAGTATTTTTG
ATGCAGCAGCGATAGCAACAGTGGGAGCTGCTGTCGGCGCTGCTGCGCCG
GATCAGCCATCATCACCAGAAGCAGCAGCAGCAGCGCATGCCCAACCACC
ACCGCCACCGCCCTTACCATCATTACCATCACACACAAAAGCCGAGCACC
CACCCCCTAATCCTCTGAAGACAAAGGGTCCACATGCCGAAGTGAACTAT
GCCGCAGAAAAAGCGGGAGCGGTAGTTCTGCAGTCCTCGTCTTCCTTGGT
CGGGGCTAAGAATTTATTAGACGATGATAAAGACAAGTATGCTCGGAGCC
CCTGTGCTGAAAGTAAGTGGGTAATTATCAACTTGTCGGAAGATATACGG
ATCCATGCGTTGGTGCTAGCGAATTATGAGAAGTTCTCGTCGATGGTGAA
GGACTTTCAGGTGTGGTATAGTGTGAAATGCCCTAGCTTGGACGGCGAGG
AGGACTCGGAGGGATGGTTGGAGCTGGGCTCGTTCGAGGCCAGGCAGAAG
ACAGGAGAGCAGCGGTTTGTGGTGGACCCGCCGAGGTACGCTAGATATTT
GAAGGTGAGATTGGTCTCGCATTGGAGCCGGGAGTTTTACTGTACCTTGA
GTCAAATCAAAGTGTTGGGTTCGACGTTGCAGCAGGGGTTCATGGATGAC
TGGCAGAAGCAGAAGCTAAACTTGGGGTCACAGTTGGAGGTGATCGATCC
GGCTGCAACAGTGGATGGCGAGCGGAGCAGCATCATCAGCAATCAGACTT
GTCTATATGATGGCACGTGCACGGCTCAGGAAGAGGGTAAGTACGCGGCC
GGGGGTGTCGAGGTTGAAGCCCCGCCTTCCTCTTCTTCCGGTAGCACTGA
TGGCGGGGACAACGACGCGTTTAAAAAAAGCGGGGAAGGGGGGAATGTTC
TTCCACAAGCCGCTGGTGACGACACGGGGACTGAACGACCTACAGAATCT
CAGCCCGATGGACGACAAAAAGAGCATCGCCCACAGCTCGATAAAAAGGA
TGAGTTACAGCTGGCCAAGGAAAAGGGGATAACGTCGCAATTTTTTGCCG
AATCAGCGGATGACGGCCGGAGTGTAGAAGTGGAGAAAGACGCACCGCCT
ATAATGGACGAGAAGCTTCCTGGAGGAAAAGCGGCGGCAATAGAGCCACC
TGTGTTGGGACCAAACGCTGAAGGTGCGGTAAAATCAAGCGAGAAATTGA
TTGATGATACGTTGCATTTACCGGCCATCTCCGCCGTGGATCCCGGCAAG
GGAAGCAACGTCGAGAGTAATGCAAAAGAAGGAGCGGCTGTGGCGACAAG
AGGAGAGGTGCACAAAGAAGACGGCTTTCAAACTGGAGATAAAGGCTCTG
TGCCTGCCGAAGAGCCTCTGCAAGGCGCATCGGGGGAGCGTGAACTCAGC
TCGCTATCTTCCCTCCTGTCCACTCAGAATCTTCTATCGTCAACTCCCAT
GACAATAGCTCTGGAGTCAGAAGTCACTTCGGAGGAGAGAGCATCAGCAG
AAAGGCAAGACACTCCTGAGAGAGATACGACGGTGGACCTCGCACTCCAA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGTCTCGGGAGG
GGCGGCAGACCTCCCTCTTCATTCAGCGGACGGTGCAACAAAAGAAAATG
TTACTGCTACCATGATGGTGAAGGACGAAGGGGTGGTCACACCAGTACCA
GCCGCAGCCGAGACCGCCGCTACCTCTTCTTCGTCTCCTCCCGAAGTAAC
GACCACACCCACCACAACATCAACGGTGGTAGCAACCGTCAGCGGCGCCC
AGGCTAAGACAGAATTAATGTCTCGTTTTCGACATCAGTGTCTGCAGCAG
ATGCGGCTCGGGGACTTCAAAAAGCAAAAGCTGGCCAAGCTCCAGGAGGA
CTTGGGCCCGAAGGGGGAAGGGGCGGCGGCGGCTTCTTTGGGAAGTGGGA
GTCCGTATGATAACATTTTTAAAACCTTGATGGACGAGATGACATCCTTG
GAAATAAATCAGTCGATTTTTGATGTGTATGTGAGTAACTTGCACAGTTG
TTTTGTCCAGGTGGTGGATGACGTCCTTTTGGAGCAGGAACGGGCTAGGT
TGGAGGCGAGGGAGATGATAGGTTTGATGCAGAGGAGATTGCAGGATCAA
GCGACGGTGAATGAACAGCTCTTGCGCCGGATGTATCGATTGGAGAAAAG
CTTTCTGGCGGGGGCATTGGGATGGCTTGCTGTCTTAAGCTTCCTCGTTT
CGCTAGCCTGCGCGCAGCTTGTGGTCTGGAAAAGGGCTCGACGGACACCA
GTCGCGGGGGAGGAGTTTGAGCGGTAG

protein sequence of NO14G01890.1

>NO14G01890.1-protein ID=NO14G01890.1-protein|Name=NO14G01890.1|organism=Nannochloropsis oceanica|type=polypeptide|length=959bp
MSHTDDAMEKLDYSGSFSNSSIPDRTSSATTPTRLPTSSSSSGPLSGGRP
PLRMGLLFVLALVFMTVAHGGSTGHENLTPDVDASVGSSTPSPPSSTHTP
PPPMTTPPESGGSTGPTGGFKILESLLGGKGTKSSKQATAASLANQPAPT
GNAEEKEELAAASLVSLQGHGDSIVSDVESSIFDAAAIATVGAAVGAAAP
DQPSSPEAAAAAHAQPPPPPPLPSLPSHTKAEHPPPNPLKTKGPHAEVNY
AAEKAGAVVLQSSSSLVGAKNLLDDDKDKYARSPCAESKWVIINLSEDIR
IHALVLANYEKFSSMVKDFQVWYSVKCPSLDGEEDSEGWLELGSFEARQK
TGEQRFVVDPPRYARYLKVRLVSHWSREFYCTLSQIKVLGSTLQQGFMDD
WQKQKLNLGSQLEVIDPAATVDGERSSIISNQTCLYDGTCTAQEEGKYAA
GGVEVEAPPSSSSGSTDGGDNDAFKKSGEGGNVLPQAAGDDTGTERPTES
QPDGRQKEHRPQLDKKDELQLAKEKGITSQFFAESADDGRSVEVEKDAPP
IMDEKLPGGKAAAIEPPVLGPNAEGAVKSSEKLIDDTLHLPAISAVDPGK
GSNVESNAKEGAAVATRGEVHKEDGFQTGDKGSVPAEEPLQGASGERELS
SLSSLLSTQNLLSSTPMTIALESEVTSEERASAERQDTPERDTTVDLALQ
AAAAAAAAAAAAAVSGGAADLPLHSADGATKENVTATMMVKDEGVVTPVP
AAAETAATSSSSPPEVTTTPTTTSTVVATVSGAQAKTELMSRFRHQCLQQ
MRLGDFKKQKLAKLQEDLGPKGEGAAAASLGSGSPYDNIFKTLMDEMTSL
EINQSIFDVYVSNLHSCFVQVVDDVLLEQERARLEAREMIGLMQRRLQDQ
ATVNEQLLRRMYRLEKSFLAGALGWLAVLSFLVSLACAQLVVWKRARRTP
VAGEEFER*

Synonyms

Publications