Naga_100117g9, gene5858 (gene) Nannochloropsis gaditana

Overview
NameNaga_100117g9
Unique Namegene5858
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:473229..476683 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100117g9
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:473229..476683 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005737cytoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL025ngnoL025Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL023ngnoL023Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G01890NO14G01890Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6063rna6063-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6063rna6063Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6063

>rna6063-protein ID=rna6063-protein|Name=rna6063|organism=Nannochloropsis gaditana|type=polypeptide|length=922bp
MEASLMCRGQSSSTSPATAVLAQGMRSRIFTGPAWNISRPVWIGFLLLCA
LVVATMGQGGSHGLSHDSARDMNTPADVAPSPDSTLTVPSAPGSPITTGG
FSGPSGGFRILETLLGSKGSHVNKGEGAPSTSRADGSVESYQAGGRVVVD
SRTHPPESEISEQGQGAGLPPVIAANLREALPPAFIQEGPVQELPKEQKQ
GHAQPEQKVGLTNPSHPKAKGPQAEVNYAAEKAGAVVLQSSHSLVGAKNL
LDDDKDKYARSPCDQSKWLIINLSEDIRIDSLVLANYEKFSSMVKDFQVL
YSVKCPSLDGDEDSDGWMELGTFQAKEKAGEQRFQVDPPRYARYLKVRLL
SHWSREFYCTLSQIKVLGSTLQQGFMDDWQRQKINLGSHLEAIGPSDAIG
SHKEVEGGGDGGSVNQTCLFDGDCPAPEGEETPFMPADNVEGDLSTIDTS
TAEDDLGAHSITPPASKAPKPSKANPGNERVQEDLQQTHSTTVENGLQGT
GREGVVQHDDLDRNLNGTGSDDDLQRINSSLPFGRDEALKGGASGDECTG
EKMSEHSPAKEPTNEQLRKDLPSRNPRHEDGEILVESGGTAVARGKAIPS
SGNLHAENSEEQAVARPPSSADLPLPLDAPKVHDTTAKSSGQSLEALHPT
ASSAAESEGEDIAKAREPENGATAEAEFYEASASGGKPLVSPTRDSNGDG
VVTPIPHMGPGSHAKPPTQVHDGGSPQYTAASTTSTTTVLATVSGAPAKT
ELMTRFRHQCLQQMRLSDFKKQKLAKLQDDPRTKDHGTGSTATSLGNGSP
YDNIFKTLMDEMASLEINQSIFDVYVSNLHSCFVQVVDDVLLEQDRARLE
ALETIGLLQARLQSQAAVNEQFLRRMQRLESLSLAGGLAWIALIACLVLA
AGAQRALWKRWQGIATIEQPEM
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Synonyms
Publications