jgi.p|Nanoce1779_2|590221, gene_5760 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|590221
Unique Namegene_5760
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_11:513779..517153 +

Link to JBrowse

Properties
Property NameValue
TranscriptId590307
ProteinId590221
Product nameSad1 / UNC-like C-terminal-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_11supercontigscaffold_11:513779..517153 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL069ncniL069Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G01890NO14G01890Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|590221mRNA_5760-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|590221mRNA_5760Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|590221

>mRNA_5760-protein ID=mRNA_5760-protein|Name=jgi.p|Nanoce1779_2|590221|organism=Nannochloropsis oceanica|type=polypeptide|length=954bp
MSHTDDAMEKLDYSGSFSNSSIPDRTSSATTPTRLPTSSSSSGPLSGGRP
PLRMGLLFVLALVFMTVAHGGSTGHENLTPDVDASVGSSTPSPPSSTHTP
PPPMTTPPESGGSTGPTGGFKILESLLGGKGTKSSKQATAASLANQPAPT
GNAEEKEELAAASLVSLQGHGDSIVSDVESSIFDAAAIATVGAAVGAAAP
DQPSSPEAAAAAHAQPPPPPPLPSLPSHTKAEHPPPNPLKTKGPHAEVNY
AAEKAGAVVLQSSSSLVGAKNLLDDDKDKYARSPCAESKWVIINLSEDIR
IHALVLANYEKFSSMVKDFQVWYSVKCPSLDGEEDSEGWLELGSFEARQK
TGEQRFVVDPPRYARYLKVRLVSHWSREFYCTLSQIKVLGSTLQQGFMDD
WQKQKLNLGSQLEVIDPAATVDGERSSIISNQTCLYDGTCTAQEEGKHAA
GGVEVEAPPSSSSGSTDGGDNDAFKKSGEGGNVLPQAAGDDTGTERPTES
QPDGRQKEHRPQLDKKDELQLAKEKGITSQFFAESADDGRSVEVEKDAPP
IMDEKLPGGKAAAIEPPVLGPNAEGAVKSSEKLIDDTLHLPAISAVDPGK
GSNVESNAKEGAAVATRGEVHKEDGFQTGDKGSVPAEEPLQGASGERELS
SLSSLLSTQNLLSSTPMTIALESEVTSEERASAERQDTPERDTTVDPALQ
AAAAAAAAVSGGAADLPLHSADGATKENVTATMMVKDEGVVTPVPAAAET
AATSSSSPPEVTTTPTTTSTVVATVSGAQAKTELMSRFRHQCLQQMRLGD
FKKQKLAKLQEDLGPKGEGAAAASLGSGSPYDNIFKTLMDEMTSLEINQS
IFDVYVSNLHSCFVQVVDDVLLEQERARLEAREMIGLMQRRLQDQATVNE
QLLRRMYRLEKSFLAGALGWLAVLSFLVSLACAQLVVWKRARRTPVAGEE
FER*
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Synonyms
Publications