NO13G01850, NO13G01850 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G01850 vs. NCBI_GenBank
Match: EWM21827.1 (quinoprotein amine beta chain-like ric1-like guanyl-nucleotide exchange factor [Nannochloropsis gaditana]) HSP 1 Score: 1539.2 bits (3984), Expect = 0.000e+0 Identity = 896/1714 (52.28%), Postives = 1060/1714 (61.84%), Query Frame = 0 Query: 29 MASDPTGQYFAILTRHDLQVWSGXXXXXXXXXXXXXXXXXXXXXXXXXDTDEAGLQEDEEEYVKPAVTWSRSGQEICALRLDGVVVFFRLHFLDSSPLINGIPLPEWMDMTPGGGMSSVLDAPHAVEVLPLRRLDLGRGNRATCLSAGLWSQHLLLGKGLEMAVLDVSWSGNVQREYQL-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXLHICYSDTSHLFGAILSDGRAVVSNIPSSSFTVKTVPVPYNLVLSSSHPHEQGQDAFDIAESMAFSPVDSVLAVGYGDGSVSIIRVLSSKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFAPSSWQPLYPSGNASDITLIISRRLSLASLGFEMRHVGAVMTLGYSPDGSSLAVAHSWSCSLNVWDTSQWCRPMTTFPRVPHTPTAGGRGEWTGGXXXXXXXXXXXXXXXXXXXXXXCLLWTQQGYRLLVAHNEVRQEDLLFQDQIEE--------------GKRREGRRWRRCILRRERASASIVRYEMLKWARHAPLADTPLCLQGVNTIAFIEQRPWNPRLLCWAHVTIPPAYSVNVPVQLVAQSPSGEHLAVAGKGGLALYNRPQRRWRLFGNVHQERDLHVAGLTWWGEEAVVVVAKQRGRTTFEILLYPMHHLDNAALLSEPVALPPGTRPLFLECVEDRHGTAYRSRSQRRAPNSTSGKXXXXXXXXSVPSSFKDEQRCGTSLSVSGASIHSSGNDISGNGGSKHATSTSLDAVYWIRSAVLMVGDANFLLFYRLVRDHSPKGVSVSFIRDLKIPLHSGGATTAXXXXXXXXXXXXXXXXLTP-----------------GPVQALGRGETPRRIILLPNVSPRAVAVLSSTGSLYQVEIKSAVTTLIAKGVSSLWELVLPTEEKAMHPCYVLYCGEQGFSLWLPSLTLSEPKSLLLTREACQLPFLDPTFNPDVEGVIMGIHGPTSSLIFLTQSCIQPQASLKYAASNGGPPIPPRFEVGLQRRPIYQIAFRFLLFLQSMLLERKEGGSKAERNGGGGEGKIGGFKVSLSASSSTEECRNSDMRNGVEAKLSFSNNTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQPETRIQLADALDFLLRSCIEALAKAHPRSKKQGLG-LSSTSTTNLRIAEFTAGI-SSYFTSFSASTEQVKAALALCRREAGLDLFYEVIVRVARKIEPSRLKYIFPLPDLDEQGFGDTPVTLFEKCLATKKMHTALLYLPLIDPPGRDGGRGXXXGLLFPSTDRRARLLANWEEMQDLKLVHGLALRLLWEALRRGKKEWQMLKQLWRFIQKREEALKLYDQEARFLSEAGGGGRGCEAVNGS-------EGGSRSLVDLLYRATFGVLGAPSGAGSDVGGGGGQNEKGLSSAPASRAGSV----------NPISRPLNEFLEHLPGTVASVGAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADFDLLQHAGSGTEVLTLFASMCLATLRLRELVDSLLLLGGGDLRRVPFPSLQPWMSPGTTSFSSSASTTNSTGSRNDARKWQQHAWTSSQWPWARFEAPSEVVLDTFLAIREQFATASPSXXXXXXXXXXXXXXXXXXXXXACTVEERLSILGRICVELRDYECLLAVGTFSKDVTTVTAALKRSKLRIAEYRTIFLDEGMEAGGVAVKDFVEKSTTPLLVVGTVV 1682 MA+DPTG Y AILTRHDLQ+WS +E LQEDEE YVKP V WSR GQEICALRLDG V FF++H+L SP I+GIPLPEWMD+ PG G+SS+LD PHAV+VLPLRRL LG+G RATCLSAGLW QHLLLGK E A+LDVSW+G VQ EY L L ICYSD SH+ GA+L+DGR ++SN+P F+V+T+P +SH + +D + E++AFSPVD+VLAVGY DGSV++ R+LS+ PS P YP+ NAS+I+++ RRLSLASLG + R VGAVM + YSPDGSSLAVAH WSCSLNVWDT QWCRPMTTFPR P TP + CLLW Q+GYRLLVAHN+VR+E+++ EE + REGR +RR RASA IVRYEML+WAR A A T LCLQGVNT+AF+EQRPWNPRLL WAHVT+PPAYSVN+PV LVAQSPSG+ LAVAGK GLALY+RPQRRWRLFGNVHQER+L VAG+TWWGE+AVVVVAK R ++L+Y HHLDN++LL +PV LPPGTRPLFLECV+DRH T +RS XXXXXXXX V + +LD VYW SAVLMVGD + LLFYRL RDHSP+GVS++ L+IP + G A +T P+Q LG GET RRI+LLP VSP +VA+LSST +LYQ++++ A T + GVS+LWEL LPT E +M PCYVLYCG++GFSLWLPS K+L LTREACQ PFLDPTFNPDVEGVIMGIHGPTSSLIFLTQSC QPQ+S ++++S IPPRF+VGLQRRP YQ+AFRFLLFL SML K+ S+ + S SS EE R+ + + L ++ SQP TRIQLADALDFLLRSCIEA+ KA R +KQ LSS S ++ R A+ A + +SYFTS STEQVK ALALC+REAGL LFYEVIVRVARKIEPSRLKY+FPLPDL+ QGFGDTPVTLF KCL TKK+HTALLYLPLIDPP R G L PS+DRR RLLAN EE++D++ VH LAL LLW LRRG +EW+MLKQLWRFIQKREEA+ LY QEA L++ GGG G NGS + G+ L LYRATFG+LGAPSGAG GG K + SA G+V P + P N +L HLP T+ SV A R ADFD+LQHA SG EVLTLFASMCLATLRLRE+VD+LLLLGGGD RRVPFP+LQPWM +S S+ + + G + KWQQHA +SS WPWARFEAP ++VLDTFLAI EQF T++PS +CT EE L++ GR+CVELRDYECLLA+GTFSKD TTVTAALKRS +R+AEYR FLD+ MEAGG++VK+FV+ T P L+V +V Sbjct: 1 MAADPTGHYIAILTRHDLQIWSA----------GHHQLLLGWATTIDDGDEEVLLQEDEEVYVKPGVMWSRGGQEICALRLDGAVAFFQVHYLSHSPHIDGIPLPEWMDLAPGEGVSSMLDVPHAVDVLPLRRLYLGKGQRATCLSAGLWRQHLLLGKDKETAILDVSWNGYVQNEYSLVIQAEADGEATASATNAGTRSTDPPILPTQLPSPPAILLQICYSDVSHMLGAVLADGRVLLSNLPGPRFSVQTLP--------ASH---ESRDPPGVVEALAFSPVDAVLAVGYDDGSVAVFRILSTSHGCSPRRARSQSPVGASPSRAKPTSSASH---PSLPGPAYPAANASEISIVFFRRLSLASLGLDTRQVGAVMHVEYSPDGSSLAVAHRWSCSLNVWDTCQWCRPMTTFPRGPETPATRVKA------------------------AVSCLLWIQEGYRLLVAHNQVREEEIMVHAAKEEKEPRRDTQAHAEQMRRTREGRSYRRA-----RASACIVRYEMLRWARRAAFAHTALCLQGVNTLAFLEQRPWNPRLLSWAHVTVPPAYSVNLPVTLVAQSPSGQQLAVAGKRGLALYSRPQRRWRLFGNVHQERELEVAGMTWWGEDAVVVVAKLWSRAGCDMLVYSRHHLDNSSLLCDPVPLPPGTRPLFLECVKDRHDTVFRSXXXXXXXXXXXXXXXXXXXXXXVDGA-------------------------------------TLDGVYWTDSAVLMVGDVHKLLFYRLARDHSPRGVSIALSGHLEIPSNEGRGRDAEATADDPNALHSDGIGVTAVSDVEPSSRASNSAHSMKPMQTLGDGETARRIVLLPEVSPLSVALLSSTDTLYQIQVQDAATFCVGTGVSNLWELSLPTGEASMRPCYVLYCGDRGFSLWLPS--FCHKKALQLTREACQEPFLDPTFNPDVEGVIMGIHGPTSSLIFLTQSCTQPQSSSEHSSSADRVDIPPRFQVGLQRRPCYQVAFRFLLFLHSMLKAEKKSLSECGAS---------------SDESSLEEARSRASASNAPSGLQAGSSMGTKTTSLNNTCMDVSAGSGSAAEAVAKVVAGIFDELYSQPATRIQLADALDFLLRSCIEAVGKAQSRLQKQTRAKLSSQSPSSERGADREAPMPASYFTSLLTSTEQVKEALALCQREAGLGLFYEVIVRVARKIEPSRLKYMFPLPDLNGQGFGDTPVTLFHKCLRTKKLHTALLYLPLIDPPQR---MPEDVGPLTPSSDRRTRLLANKEEVEDVQRVHRLALELLWAVLRRGGQEWRMLKQLWRFIQKREEAMTLYAQEADVLNQ-GGGNSGLVRGNGSGADDLRNDTGNGLLFGALYRATFGMLGAPSGAGC---GGSVPQPKVMESAGRVGDGAVPPSPWSERNGQPTTTPPNAYLLHLPRTMPSVPATR-------GEGAYAWMYEPDEEAAGPHSAMADFDVLQHADSGVEVLTLFASMCLATLRLREVVDALLLLGGGDPRRVPFPTLQPWMK-AESSMSTGYNARHKEGGEGSS-KWQQHATSSSLWPWARFEAPKDIVLDTFLAICEQFLTSTPS---------TSATGAFSGKKWSCTPEECLAVFGRVCVELRDYECLLALGTFSKDTTTVTAALKRSTIRVAEYRRTFLDDRMEAGGLSVKEFVQNCTEPFLLVEDMV 1582
BLAST of NO13G01850 vs. NCBI_GenBank
Match: CBN76586.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 148.7 bits (374), Expect = 1.700e-31 Identity = 138/538 (25.65%), Postives = 214/538 (39.78%), Query Frame = 0 Query: 520 ERASASIVRYEMLKWARHAPLADTPLCLQGVNTIAFIEQRPWNPRLLCWAHVTIPPAY-SVNVPVQLVAQSPSGEHLAVAGKGGLALYNRPQRRWRLFGNVHQERDLHVAGLTWWGEEAVVVVAKQRGRTTFEILLYPMHHLDNAALLSEPVALPPGTRPLFLECVED---RHGTAYRSRSQRRAPNSTSGKXXXXXXXXSVPSSFKDEQRCGTSLSVSGASIHSSGNDISGNGGSKHATSTSLDAVYWIRSAVLMVGDANFLLFYRLVRDHSPKGVSVSFIRDLKIPLHSGGATTAXXXXXXXXXXXXXXXXLTPGPVQALGRGETPRRIILLPNVSPRAVAVLSSTGSLYQVEIKSAVTTLIAKGVSSLWELVLPTE-------EKAMHPCYVL-----------------------------------YCGEQGFSLWLPSLTLSEPKSLLLTREACQLPFLDPTFNPDVEGVIMGIHGPTSSLIFLTQ---SC--------IQPQASLKYAASNGGPP-----IPPRFEVGLQR 996 + + IV ++ L+ AR + L+ + L LQG + IA ++ +PW+ ++L W + + P Y S N P++ V+ S +G ++AVAG G A+Y+RP RWRLFGN+ QER++ VAG+ WWGE A+VV + R + F +LL+ HL + AL+ P+ LP G RPLF++ V++ R GT +G S + S+ G H GN +H T S + G + +G P+R++LLP V PR++A+L G++ +E+ S + +A+GV S+ +L +E +HPCY+L G + FS+W P++ L + C P + P G HG T S +F SC +QP AS GG P +PP F V +R Sbjct: 677 DAGAQGIVAFDFLRRAR-SNLSSSLLSLQGSDRIALVDSQPWSAQVLLWRVLPVHPGYLSSNAPLRHVSTSRAGTYVAVAGSRGFAVYSRPTNRWRLFGNIEQEREVQVAGMCWWGESALVVAS--RHKHGFILLLFSRKHLSSDALMIPPIRLPVGMRPLFMQAVQEGGSRPGTDVLFL-------LVAGSTSYLLYRLSCTGGVFEAGNLTYSVLHEGPLPHVLGN----MEPDQHYTDPSPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAVGAGMGGWGQGEKRKARREGGDLPEIG---PPKRVMLLPEVHPRSIALLDFDGNMVTMEMSSGMVRRVAEGVESVVDLTGVSEAWEVWEMPLLVHPCYLLRRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTEEFSVWCPAMRL----------DPCP-PSVQRLLTPGRATGSGGGHGMTPSPVFSLDPGASCDPERVDLGLQPLLGTMVHASQGGGPSSLSSLPPSFYVRPRR 1186
BLAST of NO13G01850 vs. NCBI_GenBank
Match: EOA25322.1 (hypothetical protein CARUB_v10018639mg [Capsella rubella]) HSP 1 Score: 107.8 bits (268), Expect = 3.200e-19 Identity = 89/316 (28.16%), Postives = 137/316 (43.35%), Query Frame = 0 Query: 373 TLIISRRLSLASLGFEMRHVGAVMTLGYSPDGSSLAVAHSWSC-SLNVWDTSQWCRPMTTFPRVPHTPTAGGRGEWTGGXXXXXXXXXXXXXXXXXXXXXXCLLWTQQGYRLLVAHNEVRQEDLLFQDQIEEGKRREGRRWRRCILRRERASASIVRYEMLKWARHAPLADTPLCLQGVNTIAFIEQRPWNPRLLCWAHVTIPPAY-SVNVPVQLVAQSPSGEHLAVAGKGGLALYNRPQRRWRLFGNVHQERDLHVAGLTWWGEEAVVVVAKQRGRTTFEILLYPMHHLDNAALLSEPVALPPGTRPLFLECVED 687 ++ + R +SL G+ + G V + ++PD S+ AV W L VW S CR M+T ++ + T+ + + W + GYRL L F + +C L + + VR M D L +Q +T +LL H+ +P +Y + N PVQ VA S G+ LAVAG GL LYN +RWR+FG+V QE+ +H GL W G++ VV+ T+E+L YP +HLD ++LL V L +P+ ++ +D Sbjct: 245 SISLLRTVSLHDWGYSAEYTGPVSNIAWTPDNSAFAV--GWKLRGLAVWSVS-GCRLMSTVRQIGLSSTSSPK-----------INPKQDCKYEPLMNGTSAIQWDEYGYRLFATEEASCDRILAFS-------------FGKCCLNIGVSGKTYVRQVMYG-------DDRLLMVQAEDTDEL--------KLL---HLKLPVSYITQNWPVQHVAASEDGKDLAVAGLHGLTLYNVMYKRWRVFGDVSQEQQIHCKGLLWLGKKIVVICNYIEASETYELLFYPKYHLDQSSLLCRKVLL---GKPMVMDVYQD 512
BLAST of NO13G01850 vs. NCBI_GenBank
Match: XP_023638204.1 (RAB6A-GEF complex partner protein 1 isoform X1 [Capsella rubella]) HSP 1 Score: 107.8 bits (268), Expect = 3.200e-19 Identity = 89/316 (28.16%), Postives = 137/316 (43.35%), Query Frame = 0 Query: 373 TLIISRRLSLASLGFEMRHVGAVMTLGYSPDGSSLAVAHSWSC-SLNVWDTSQWCRPMTTFPRVPHTPTAGGRGEWTGGXXXXXXXXXXXXXXXXXXXXXXCLLWTQQGYRLLVAHNEVRQEDLLFQDQIEEGKRREGRRWRRCILRRERASASIVRYEMLKWARHAPLADTPLCLQGVNTIAFIEQRPWNPRLLCWAHVTIPPAY-SVNVPVQLVAQSPSGEHLAVAGKGGLALYNRPQRRWRLFGNVHQERDLHVAGLTWWGEEAVVVVAKQRGRTTFEILLYPMHHLDNAALLSEPVALPPGTRPLFLECVED 687 ++ + R +SL G+ + G V + ++PD S+ AV W L VW S CR M+T ++ + T+ + + W + GYRL L F + +C L + + VR M D L +Q +T +LL H+ +P +Y + N PVQ VA S G+ LAVAG GL LYN +RWR+FG+V QE+ +H GL W G++ VV+ T+E+L YP +HLD ++LL V L +P+ ++ +D Sbjct: 287 SISLLRTVSLHDWGYSAEYTGPVSNIAWTPDNSAFAV--GWKLRGLAVWSVS-GCRLMSTVRQIGLSSTSSPK-----------INPKQDCKYEPLMNGTSAIQWDEYGYRLFATEEASCDRILAFS-------------FGKCCLNIGVSGKTYVRQVMYG-------DDRLLMVQAEDTDEL--------KLL---HLKLPVSYITQNWPVQHVAASEDGKDLAVAGLHGLTLYNVMYKRWRVFGDVSQEQQIHCKGLLWLGKKIVVICNYIEASETYELLFYPKYHLDQSSLLCRKVLL---GKPMVMDVYQD 554
BLAST of NO13G01850 vs. NCBI_GenBank
Match: XP_023638205.1 (RAB6A-GEF complex partner protein 1 isoform X2 [Capsella rubella]) HSP 1 Score: 107.8 bits (268), Expect = 3.200e-19 Identity = 89/316 (28.16%), Postives = 137/316 (43.35%), Query Frame = 0 Query: 373 TLIISRRLSLASLGFEMRHVGAVMTLGYSPDGSSLAVAHSWSC-SLNVWDTSQWCRPMTTFPRVPHTPTAGGRGEWTGGXXXXXXXXXXXXXXXXXXXXXXCLLWTQQGYRLLVAHNEVRQEDLLFQDQIEEGKRREGRRWRRCILRRERASASIVRYEMLKWARHAPLADTPLCLQGVNTIAFIEQRPWNPRLLCWAHVTIPPAY-SVNVPVQLVAQSPSGEHLAVAGKGGLALYNRPQRRWRLFGNVHQERDLHVAGLTWWGEEAVVVVAKQRGRTTFEILLYPMHHLDNAALLSEPVALPPGTRPLFLECVED 687 ++ + R +SL G+ + G V + ++PD S+ AV W L VW S CR M+T ++ + T+ + + W + GYRL L F + +C L + + VR M D L +Q +T +LL H+ +P +Y + N PVQ VA S G+ LAVAG GL LYN +RWR+FG+V QE+ +H GL W G++ VV+ T+E+L YP +HLD ++LL V L +P+ ++ +D Sbjct: 287 SISLLRTVSLHDWGYSAEYTGPVSNIAWTPDNSAFAV--GWKLRGLAVWSVS-GCRLMSTVRQIGLSSTSSPK-----------INPKQDCKYEPLMNGTSAIQWDEYGYRLFATEEASCDRILAFS-------------FGKCCLNIGVSGKTYVRQVMYG-------DDRLLMVQAEDTDEL--------KLL---HLKLPVSYITQNWPVQHVAASEDGKDLAVAGLHGLTLYNVMYKRWRVFGDVSQEQQIHCKGLLWLGKKIVVICNYIEASETYELLFYPKYHLDQSSLLCRKVLL---GKPMVMDVYQD 554
BLAST of NO13G01850 vs. NCBI_GenBank
Match: CAB71078.1 (putative protein [Arabidopsis thaliana]) HSP 1 Score: 104.8 bits (260), Expect = 2.700e-18 Identity = 90/315 (28.57%), Postives = 138/315 (43.81%), Query Frame = 0 Query: 373 TLIISRRLSLASLGFEMRHVGAVMTLGYSPDGSSLAVAHSWSCSLNVWDTSQWCRPMTTFPRVPHTPTAGGRGEWTGGXXXXXXXXXXXXXXXXXXXXXXCLLWTQQGYRLLVAHNEVRQEDLLFQDQIEEGKRREGRRWRRCILRRERASASIVRYEMLKWARHAPLADTPLCLQGVNTIAFIEQRPWNPRLLCWAHVTIPPAY-SVNVPVQLVAQSPSGEHLAVAGKGGLALYNRPQRRWRLFGNVHQERDLHVAGLTWWGEEAVVVVAKQRGRTTFEILLYPMHHLDNAALLSEPVALPPGTRPLFLECVED 687 ++ + R +SL G+ + G V + ++PD S+ AV S L VW S CR M+T ++ T T+ + + W + GYRL L F + +C L R + + VR M D L +Q +T +LL H+ +P +Y S N PVQ VA S G++LAVAG GL LY+ ++WR+FG+V QE+ +H GL W G + VV+ T+E+L YP +HLD ++LL V L +P+ ++ +D Sbjct: 241 SISLLRTVSLHDWGYSADYTGPVNNIAWTPDNSAFAVGWK-SRGLAVWSVS-GCRLMSTVRQIGLTSTSSPK-----------INPKQDCKYEPLMSGTSAIQWDEYGYRLFATEEASCDRILAFS-------------FGKCCLNRGVSGKTYVRQVMYG-------DDRLLMVQAEDTDEL--------KLL---HLKLPVSYISQNWPVQHVAASEDGKYLAVAGLHGLILYDVRFKKWRVFGDVSQEQQIHCKGLLWLG-KIVVICNFIEASETYELLFYPRYHLDQSSLLCRKVLL---GKPMVMDVYQD 507
BLAST of NO13G01850 vs. NCBI_GenBank
Match: NP_001326817.1 (Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor [Arabidopsis thaliana] >ANM64812.1 Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor [Arabidopsis thaliana]) HSP 1 Score: 104.8 bits (260), Expect = 2.700e-18 Identity = 90/315 (28.57%), Postives = 138/315 (43.81%), Query Frame = 0 Query: 373 TLIISRRLSLASLGFEMRHVGAVMTLGYSPDGSSLAVAHSWSCSLNVWDTSQWCRPMTTFPRVPHTPTAGGRGEWTGGXXXXXXXXXXXXXXXXXXXXXXCLLWTQQGYRLLVAHNEVRQEDLLFQDQIEEGKRREGRRWRRCILRRERASASIVRYEMLKWARHAPLADTPLCLQGVNTIAFIEQRPWNPRLLCWAHVTIPPAY-SVNVPVQLVAQSPSGEHLAVAGKGGLALYNRPQRRWRLFGNVHQERDLHVAGLTWWGEEAVVVVAKQRGRTTFEILLYPMHHLDNAALLSEPVALPPGTRPLFLECVED 687 ++ + R +SL G+ + G V + ++PD S+ AV S L VW S CR M+T ++ T T+ + + W + GYRL L F + +C L R + + VR M D L +Q +T +LL H+ +P +Y S N PVQ VA S G++LAVAG GL LY+ ++WR+FG+V QE+ +H GL W G + VV+ T+E+L YP +HLD ++LL V L +P+ ++ +D Sbjct: 283 SISLLRTVSLHDWGYSADYTGPVNNIAWTPDNSAFAVGWK-SRGLAVWSVS-GCRLMSTVRQIGLTSTSSPK-----------INPKQDCKYEPLMSGTSAIQWDEYGYRLFATEEASCDRILAFS-------------FGKCCLNRGVSGKTYVRQVMYG-------DDRLLMVQAEDTDEL--------KLL---HLKLPVSYISQNWPVQHVAASEDGKYLAVAGLHGLILYDVRFKKWRVFGDVSQEQQIHCKGLLWLG-KIVVICNFIEASETYELLFYPRYHLDQSSLLCRKVLL---GKPMVMDVYQD 549
BLAST of NO13G01850 vs. NCBI_GenBank
Match: NP_001319814.1 (Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor [Arabidopsis thaliana] >AEE80210.2 Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor [Arabidopsis thaliana]) HSP 1 Score: 104.8 bits (260), Expect = 2.700e-18 Identity = 90/315 (28.57%), Postives = 138/315 (43.81%), Query Frame = 0 Query: 373 TLIISRRLSLASLGFEMRHVGAVMTLGYSPDGSSLAVAHSWSCSLNVWDTSQWCRPMTTFPRVPHTPTAGGRGEWTGGXXXXXXXXXXXXXXXXXXXXXXCLLWTQQGYRLLVAHNEVRQEDLLFQDQIEEGKRREGRRWRRCILRRERASASIVRYEMLKWARHAPLADTPLCLQGVNTIAFIEQRPWNPRLLCWAHVTIPPAY-SVNVPVQLVAQSPSGEHLAVAGKGGLALYNRPQRRWRLFGNVHQERDLHVAGLTWWGEEAVVVVAKQRGRTTFEILLYPMHHLDNAALLSEPVALPPGTRPLFLECVED 687 ++ + R +SL G+ + G V + ++PD S+ AV S L VW S CR M+T ++ T T+ + + W + GYRL L F + +C L R + + VR M D L +Q +T +LL H+ +P +Y S N PVQ VA S G++LAVAG GL LY+ ++WR+FG+V QE+ +H GL W G + VV+ T+E+L YP +HLD ++LL V L +P+ ++ +D Sbjct: 241 SISLLRTVSLHDWGYSADYTGPVNNIAWTPDNSAFAVGWK-SRGLAVWSVS-GCRLMSTVRQIGLTSTSSPK-----------INPKQDCKYEPLMSGTSAIQWDEYGYRLFATEEASCDRILAFS-------------FGKCCLNRGVSGKTYVRQVMYG-------DDRLLMVQAEDTDEL--------KLL---HLKLPVSYISQNWPVQHVAASEDGKYLAVAGLHGLILYDVRFKKWRVFGDVSQEQQIHCKGLLWLG-KIVVICNFIEASETYELLFYPRYHLDQSSLLCRKVLL---GKPMVMDVYQD 507
BLAST of NO13G01850 vs. NCBI_GenBank
Match: XP_010544754.1 (PREDICTED: RAB6A-GEF complex partner protein 1-like [Tarenaya hassleriana]) HSP 1 Score: 103.6 bits (257), Expect = 6.100e-18 Identity = 83/316 (26.27%), Postives = 139/316 (43.99%), Query Frame = 0 Query: 373 TLIISRRLSLASLGFEMRHVGAVMTLGYSPDGSSLAVAHSWSC-SLNVWDTSQWCRPMTTFPRVPHTPTAGGRGEWTGGXXXXXXXXXXXXXXXXXXXXXXCLLWTQQGYRLLVAHNEVRQEDLLFQDQIEEGKRREGRRWRRCILRRERASASIVRYEMLKWARHAPLADTPLCLQGVNTIAFIEQRPWNPRLLCWAHVTIPPAY-SVNVPVQLVAQSPSGEHLAVAGKGGLALYNRPQRRWRLFGNVHQERDLHVAGLTWWGEEAVVVVAKQRGRTTFEILLYPMHHLDNAALLSEPVALPPGTRPLFLECVED 687 ++ + R +SL G+ + GAV ++ ++PD S+ AV W L+VW S CR M+T ++ + + + + W + GYRL L F + +C L R + + VR + G + + ++ + L H+ IP +Y + N PV+ VA SP G+++AVAG GL LY+ ++WR+FG+V QE+ + GL W G + VV+ G T+E+L YP +HLD ++LL V L +P+ ++ +D Sbjct: 287 SMSLIRTVSLHDWGYSVEDTGAVSSIAWTPDNSAFAV--GWKLRGLSVWSVS-GCRLMSTIRQIGLSSASSPK-----------IKPSQDCKYEPLINGTSVIQWDEYGYRLYATEEASCDRILAFS-------------FGKCCLNRGVSGKTYVRQ----------------VIYGEDRLLMVQSEDTDELKL--LHLKIPVSYIAQNWPVRHVAASPDGKYMAVAGLHGLILYDIRLKKWRVFGDVSQEQKIQCKGLLWLG-KIVVICNYIDGSDTYELLFYPRYHLDQSSLLCRKVLL---AKPMVMDVYQD 553
BLAST of NO13G01850 vs. NCBI_GenBank
Match: NP_568507.3 (Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor [Arabidopsis thaliana] >AED93791.1 Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor [Arabidopsis thaliana]) HSP 1 Score: 103.6 bits (257), Expect = 6.100e-18 Identity = 89/315 (28.25%), Postives = 137/315 (43.49%), Query Frame = 0 Query: 373 TLIISRRLSLASLGFEMRHVGAVMTLGYSPDGSSLAVAHSWSCSLNVWDTSQWCRPMTTFPRVPHTPTAGGRGEWTGGXXXXXXXXXXXXXXXXXXXXXXCLLWTQQGYRLLVAHNEVRQEDLLFQDQIEEGKRREGRRWRRCILRRERASASIVRYEMLKWARHAPLADTPLCLQGVNTIAFIEQRPWNPRLLCWAHVTIPPAY-SVNVPVQLVAQSPSGEHLAVAGKGGLALYNRPQRRWRLFGNVHQERDLHVAGLTWWGEEAVVVVAKQRGRTTFEILLYPMHHLDNAALLSEPVALPPGTRPLFLECVED 687 ++ + R +SL G+ + G V + ++PD S+ AV S L VW S CR M+T ++ T T+ + + W + GYRL L F + +C L R + + VR M D L +Q +T +LL H+ +P +Y S N PVQ VA S G++LA AG GL LY+ ++WR+FG+V QE+ +H GL W G + VV+ T+E+L YP +HLD ++LL V L +P+ ++ +D Sbjct: 287 SISLLRTVSLHDWGYSADYTGPVNNIAWTPDNSAFAVGWK-SRGLAVWSVS-GCRLMSTVRQIGLTSTSSPK-----------INPKQDCKYEPLMSGTSAIQWDEYGYRLFATEEASYDRILAFS-------------FGKCCLNRGVSGKTYVRQVMYG-------DDRLLMVQAEDTDEL--------KLL---HLKLPVSYISQNWPVQHVAASEDGKYLAFAGLHGLILYDIRFKKWRVFGDVSQEQQIHCKGLLWLG-KIVVICNYIEASETYELLFYPRYHLDQSSLLCRKVLL---GKPMVMDVYQD 553 The following BLAST results are available for this feature:
BLAST of NO13G01850 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G01850 ID=NO13G01850|Name=NO13G01850|organism=Nannochloropsis oceanica|type=gene|length=5058bpback to top protein sequence of NO13G01850.1 >NO13G01850.1-protein ID=NO13G01850.1-protein|Name=NO13G01850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1686bpback to top Synonyms
Publications
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