jgi.p|Nanoce1779_2|672269, gene_6820 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|672269
Unique Namegene_6820
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_17:182451..187524 +

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Properties
Property NameValue
TranscriptId672355
ProteinId672269
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_17supercontigscaffold_17:182451..187524 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL026ncniL026Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO13G01850NO13G01850Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|672269mRNA_6820-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|672269mRNA_6820Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|672269

>mRNA_6820-protein ID=mRNA_6820-protein|Name=jgi.p|Nanoce1779_2|672269|organism=Nannochloropsis oceanica|type=polypeptide|length=1686bp
MPGFTVGCPQRLAVRQGDSVRHTTSVLGMASDPTGQYFAILTRHDLQVWS
GGHHQLLLGWSTTNNNATAAASEGQSDTDEAGLQEDEEEYVKPAVTWSRS
GQEICALRLDGVVVFFRLHFLDSSPLINGIPLPEWMDMTPGGGMSSVLDA
PHAVEVLPLRRLDLGRGNRATCLSAGLWSQHLLLGKGLEMAVLDVSWSGN
VQREYQLSSSSNNNSSSISRNNSVSNSPSPPPILLHICYSDTSHLFGAIL
SDGRAVVSNIPSSSFTVKTVPVPYNLVLSSSHPHEQGQDAFDIAESMAFS
PVDSVLAVGYGDGSVSIIRVLSSKTYTDSPRRPRPSSSSSSSSSSSSSSP
SPCQFAPSSWQPLYPSGNASDITLIISRRLSLASLGFEMRHVGAVMTLGY
SPDGSSLAVAHSWSCSLNVWDTSQWCRPMTTFPRVPHTPTAGGRGEWTGG
GAGAAGAAGGEGGPVSVMAAVACLLWTQQGYRLLVAHNEVRQEDLLFQDQ
IEEGKRREGRRWRRCILRRERASASIVRYEMLKWARHAPLADTPLCLQGV
NTIAFIEQRPWNPRLLCWAHVTIPPAYSVNVPVQLVAQSPSGEHLAVAGK
GGLALYNRPQRRWRLFGNVHQERDLHVAGLTWWGEEAVVVVAKQRGRTTF
EILLYPMHHLDNAALLSEPVALPPGTRPLFLECVEDRHGTAYRSRSQRRA
PNSTSGKSSRSSRSSSVPSSFKDEQRCGTSLSVSGASIHSSGNDISGNGG
SKHATSTSLDAVYWIRSAVLMVGDANFLLFYRLVRDHSPKGVSVSFIRDL
KIPLHSGGATTAAPAPATAAAATAVTTSLTPGPVQALGRGETPRRIILLP
NVSPRAVAVLSSTGSLYQVEIKSAVTTLIAKGVSSLWELVLPTEEKAMHP
CYVLYCGEQGFSLWLPSLTLSEPKSLLLTREACQLPFLDPTFNPDVEGVI
MGIHGPTSSLIFLTQSCIQPQASLKYAASNGGPPIPPRFEVGLQRRPIYQ
IAFRFLLFLQSMLLERKEGGSKAERNGGGGEGKIGGFKVSLSASSSTEEC
RNSDMRNGVEAKLSFSNNTATSAAAIAAASTDTRTSSNAAANAVGGVVAG
VFDELYSQPETRIQLADALDFLLRSCIEALAKAHPRSKKQGLGLSSTSTT
NLRIAEFTAGISSYFTSFSASTEQVKAALALCRREAGLDLFYEVIVRVAR
KIEPSRLKYIFPLPDLDEQGFGDTPVTLFEKCLATKKMHTALLYLPLIDP
PGRDGGRGGGGGLLFPSTDRRARLLANWEEMQDLKLVHGLALRLLWEALR
RGKKEWQMLKQLWRFIQKREEALKLYDQEARFLSEAGGGGRGCEAVNGSE
GGSRSLVDLLYRATFGVLGAPSGAGSDVGGGGGQNEKGLSSAPASRAGSV
NPISRPLNEFLEHLPGTVASVGAARGGGGGRGYGWMSEPDAPESNPSSSS
SSSLADFDLLQHAGSGTEVLTLFASMCLATLRLRELVDSLLLLGGGDLRR
VPFPSLQPWMSPGTTSFSSSASTTNSTGSRNDARKWQQHAWTSSQWPWAR
FEAPSEVVLDTFLAIREQFATASPSGAAAAATAATTATEETGRRKKACTV
EERLSILGRICVELRDYECLLAVGTFSKDVTTVTAALKRSKLRIAEYRTI
FLDEGMEAGGVAVKDFVEKSTTPLLVVGTVVGRSS*
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Synonyms
Publications