jgi.p|Nanoce1779_2|672269, mRNA_6820-protein (polypeptide) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|672269
Unique NamemRNA_6820-protein
Typepolypeptide
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length1686
Alignment locationscaffold_17:182467..187524 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_17supercontigscaffold_17:182467..187524 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This polypeptide derives from the following gene feature(s):

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|672269gene_6820Nannochloropsis oceanica (N. oceanica CCMP1779)gene


This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|672269mRNA_6820Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>mRNA_6820-protein ID=mRNA_6820-protein|Name=jgi.p|Nanoce1779_2|672269|organism=Nannochloropsis oceanica|type=polypeptide|length=1686bp
MPGFTVGCPQRLAVRQGDSVRHTTSVLGMASDPTGQYFAILTRHDLQVWS
GGHHQLLLGWSTTNNNATAAASEGQSDTDEAGLQEDEEEYVKPAVTWSRS
GQEICALRLDGVVVFFRLHFLDSSPLINGIPLPEWMDMTPGGGMSSVLDA
PHAVEVLPLRRLDLGRGNRATCLSAGLWSQHLLLGKGLEMAVLDVSWSGN
VQREYQLSSSSNNNSSSISRNNSVSNSPSPPPILLHICYSDTSHLFGAIL
SDGRAVVSNIPSSSFTVKTVPVPYNLVLSSSHPHEQGQDAFDIAESMAFS
PVDSVLAVGYGDGSVSIIRVLSSKTYTDSPRRPRPSSSSSSSSSSSSSSP
SPCQFAPSSWQPLYPSGNASDITLIISRRLSLASLGFEMRHVGAVMTLGY
SPDGSSLAVAHSWSCSLNVWDTSQWCRPMTTFPRVPHTPTAGGRGEWTGG
GAGAAGAAGGEGGPVSVMAAVACLLWTQQGYRLLVAHNEVRQEDLLFQDQ
IEEGKRREGRRWRRCILRRERASASIVRYEMLKWARHAPLADTPLCLQGV
NTIAFIEQRPWNPRLLCWAHVTIPPAYSVNVPVQLVAQSPSGEHLAVAGK
GGLALYNRPQRRWRLFGNVHQERDLHVAGLTWWGEEAVVVVAKQRGRTTF
EILLYPMHHLDNAALLSEPVALPPGTRPLFLECVEDRHGTAYRSRSQRRA
PNSTSGKSSRSSRSSSVPSSFKDEQRCGTSLSVSGASIHSSGNDISGNGG
SKHATSTSLDAVYWIRSAVLMVGDANFLLFYRLVRDHSPKGVSVSFIRDL
KIPLHSGGATTAAPAPATAAAATAVTTSLTPGPVQALGRGETPRRIILLP
NVSPRAVAVLSSTGSLYQVEIKSAVTTLIAKGVSSLWELVLPTEEKAMHP
CYVLYCGEQGFSLWLPSLTLSEPKSLLLTREACQLPFLDPTFNPDVEGVI
MGIHGPTSSLIFLTQSCIQPQASLKYAASNGGPPIPPRFEVGLQRRPIYQ
IAFRFLLFLQSMLLERKEGGSKAERNGGGGEGKIGGFKVSLSASSSTEEC
RNSDMRNGVEAKLSFSNNTATSAAAIAAASTDTRTSSNAAANAVGGVVAG
VFDELYSQPETRIQLADALDFLLRSCIEALAKAHPRSKKQGLGLSSTSTT
NLRIAEFTAGISSYFTSFSASTEQVKAALALCRREAGLDLFYEVIVRVAR
KIEPSRLKYIFPLPDLDEQGFGDTPVTLFEKCLATKKMHTALLYLPLIDP
PGRDGGRGGGGGLLFPSTDRRARLLANWEEMQDLKLVHGLALRLLWEALR
RGKKEWQMLKQLWRFIQKREEALKLYDQEARFLSEAGGGGRGCEAVNGSE
GGSRSLVDLLYRATFGVLGAPSGAGSDVGGGGGQNEKGLSSAPASRAGSV
NPISRPLNEFLEHLPGTVASVGAARGGGGGRGYGWMSEPDAPESNPSSSS
SSSLADFDLLQHAGSGTEVLTLFASMCLATLRLRELVDSLLLLGGGDLRR
VPFPSLQPWMSPGTTSFSSSASTTNSTGSRNDARKWQQHAWTSSQWPWAR
FEAPSEVVLDTFLAIREQFATASPSGAAAAATAATTATEETGRRKKACTV
EERLSILGRICVELRDYECLLAVGTFSKDVTTVTAALKRSKLRIAEYRTI
FLDEGMEAGGVAVKDFVEKSTTPLLVVGTVVGRSS*
back to top
Synonyms
Publications