Naga_100051g31, gene8605 (gene) Nannochloropsis gaditana

Overview
NameNaga_100051g31
Unique Namegene8605
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:366005..371002 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100051g31
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:366005..371002 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0009987cellular process
Vocabulary: Cellular Component
TermDefinition
GO:0005794Golgi apparatus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL070ngnoL070Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL069ngnoL069Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO13G01850NO13G01850Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna8875rna8875-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna8875rna8875Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna8875

>rna8875-protein ID=rna8875-protein|Name=rna8875|organism=Nannochloropsis gaditana|type=polypeptide|length=1585bp
MAADPTGHYIAILTRHDLQIWSAGHHQLLLGWATTIDDGDEEVLLQEDEE
VYVKPGVMWSRGGQEICALRLDGAVAFFQVHYLSHSPHIDGIPLPEWMDL
APGEGVSSMLDVPHAVDVLPLRRLYLGKGQRATCLSAGLWRQHLLLGKDK
ETAILDVSWNGYVQNEYSLVIQAEADGEATASATNAGTRSTDPPILPTQL
PSPPAILLQICYSDVSHMLGAVLADGRVLLSNLPGPRFSVQTLPASHESR
DPPGVVEALAFSPVDAVLAVGYDDGSVAVFRILSTSHGCSPRRARSQSPV
GASPSRAKPTSSASHPSLPGPAYPAANASEISIVFFRRLSLASLGLDTRQ
VGAVMHVEYSPDGSSLAVAHRWSCSLNVWDTCQWCRPMTTFPRGPETPAT
RVKAAVSCLLWIQEGYRLLVAHNQVREEEIMVHAAKEEKEPRRDTQAHAE
QMRRTREGRSYRRARASACIVRYEMLRWARRAAFAHTALCLQGVNTLAFL
EQRPWNPRLLSWAHVTVPPAYSVNLPVTLVAQSPSGQQLAVAGKRGLALY
SRPQRRWRLFGNVHQERELEVAGMTWWGEDAVVVVAKLWSRAGCDMLVYS
RHHLDNSSLLCDPVPLPPGTRPLFLECVKDRHDTVFRSRSRSKASRRPGS
GSLGTGRGRGVDGATLDGVYWTDSAVLMVGDVHKLLFYRLARDHSPRGVS
IALSGHLEIPSNEGRGRDAEATADDPNALHSDGIGVTAVSDVEPSSRASN
SAHSMKPMQTLGDGETARRIVLLPEVSPLSVALLSSTDTLYQIQVQDAAT
FCVGTGVSNLWELSLPTGEASMRPCYVLYCGDRGFSLWLPSFCHKKALQL
TREACQEPFLDPTFNPDVEGVIMGIHGPTSSLIFLTQSCTQPQSSSEHSS
SADRVDIPPRFQVGLQRRPCYQVAFRFLLFLHSMLKAEKKSLSECGASSD
ESSLEEARSRASASNAPSGLQAGSSMGTKTTSLNNTCMDVSAGSGSAAEA
VAKVVAGIFDELYSQPATRIQLADALDFLLRSCIEAVGKAQSRLQKQTRA
KLSSQSPSSERGADREAPMPASYFTSLLTSTEQVKEALALCQREAGLGLF
YEVIVRVARKIEPSRLKYMFPLPDLNGQGFGDTPVTLFHKCLRTKKLHTA
LLYLPLIDPPQRMPEDVGPLTPSSDRRTRLLANKEEVEDVQRVHRLALEL
LWAVLRRGGQEWRMLKQLWRFIQKREEAMTLYAQEADVLNQGGGNSGLVR
GNGSGADDLRNDTGNGLLFGALYRATFGMLGAPSGAGCGGSVPQPKVMES
AGRVGDGAVPPSPWSERNGQPTTTPPNAYLLHLPRTMPSVPATRGEGAYA
WMYEPDEEAAGPHSAMADFDVLQHADSGVEVLTLFASMCLATLRLREVVD
ALLLLGGGDPRRVPFPTLQPWMKAESSMSTGYNARHKEGGEGSSKWQQHA
TSSSLWPWARFEAPKDIVLDTFLAICEQFLTSTPSTSATGAFSGKKWSCT
PEECLAVFGRVCVELRDYECLLALGTFSKDTTTVTAALKRSTIRVAEYRR
TFLDDRMEAGGLSVKEFVQNCTEPFLLVEDMVRDH
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Synonyms
Publications