NO13G01780, NO13G01780 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G01780 vs. NCBI_GenBank
Match: GBC38566.1 (DNA mismatch repair protein Msh5 [Rhizophagus irregularis DAOM 181602]) HSP 1 Score: 312.0 bits (798), Expect = 5.400e-81 Identity = 207/696 (29.74%), Postives = 355/696 (51.01%), Query Frame = 0 Query: 26 RRNYDRLSCVIDFLEEPLLVKALGALLIHLQGRVFSLEMAGRVP--VGRLRRFDLAGFVRLDNNALMSLQIFHEEKHPNVINGRGKAKEGFSLFSLLDQTRSRPGRKVLKEWMLRPLRCVEKIEERQMMVELLLQGEAMEVVNNAGRLLGRVGDVGRVLLRVKRAGATVNDWLTLANTAQHVLLLQNCLIVLGHVAIRQERVVEGGKEEGGAARVVRGVLERISGEAVRRVQEVVTCVVDLEITKESKVVAVRTGCDAELDRLRAEYDNLEEFLSGEARDVLAEQASRLLSTVSVQFLPQVGFLVIVQASEKVAVETDPR---FRFVFAEGESVYYKTPRMDVLDDSIGDLAAAIHDREATLLRAVGEEVLKEEVPLTEAVRACAEVDVLLSFAQVAGGLAWVKPMITEDKVVVVKDGRHPLQELAVEVFIPNDVFLVGKGGESSDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGLAVVTGPNFSGKSVYIKTVGVLTYLAHLGCFLPCQQALIGLVDGIYTRIASAETVTVQQSTFTIDCSQMNAVFRNATPSSLILVDEFGKGSAETDGLALLVACLSRLHILG---ARTLVTTHFLELFQRKGLLSPHLAYEISYRMDVFVPXXXXXXXXXXXXXXXXXXIQTVVPLFKLTKGVATSSDGFSCAVLAGLASPLVKRAEHVAR 714 R Y +LSCV++ +E + GAL+ ++ + + P + + +F L F+ ++++AL SLQIF +E HPN ++ R ++KEG SLF +L+ TR+ G+++LK+W LRP ++ I+ER +E LQ + +E L + ++ +++ +K + DW +L A + L ++N + L H E + ++ + E ++ + + + E KE+++V V++ D ELD ++ YD L++FLS AR++ S T++V + PQ+G+L+ V + E D + + F+ +VYYK RM LD+ +GD+ I DRE +++ + + +L+ L A ACAE+D LLS A+ A + +P + + ++ + GRHPLQEL V++F+ ND+ + G G ++ + + +++G N+SGKSVY+K V ++TY+AH+G F+P A IGL D I+TR+ + ETV+ QS F ID Q++ RN+T SL++ DEFGKG+ TDG L + L G + + THF E+F+ LL L ++ M++ + + L++L G +T+S G CA AG+ S +VKRA H+++ Sbjct: 246 RETYLQLSCVVN-MESVETICCAGALISYISRAKITEGIPEDQPLDISEIEQFSLKRFLHINSDALCSLQIFEDESHPN-MHMRARSKEGLSLFGILNNTRTTSGKQLLKQWFLRPTLDLDIIDERHRTIECFLQTDNLENSEQLVSCLKNIKNIPKIIDNMK-GNLNIKDWQSLLQFAFYCLKIRNIVRELNH----SENI-----------QIFTKIKETFIVADLKDIGSYINVIDFDESVKENRIV-VKSHIDEELDHMKRTYDGLDDFLSEVAREISTTIPSEFALTLNVIYFPQLGYLITVPLKPEWKKEDDFKIDGLYYQFSTATTVYYKNDRMKELDEYLGDIHGLIVDREIEIMQKLQDHILEYASLLLNATAACAELDCLLSLAESARKFKYCRPHLVNENILEIVKGRHPLQELCVDIFVANDIKIAGGNGIITNENVDNDSATSSAY-------------------------KSIMLLSGANYSGKSVYLKQVALITYMAHIGSFVPADSATIGLTDKIFTRVQTRETVSKIQSAFMIDLQQISIALRNSTSRSLLIFDEFGKGTGSTDGAGLFCGVIEHLLKRGRDCPKVIAATHFHEIFE-NNLLPQALPISLA-TMEIM----------------RDDEKEELAFLYRLVPGRSTTSWGTFCAAFAGMPSHIVKRASHLSQ 879
BLAST of NO13G01780 vs. NCBI_GenBank
Match: PKC07226.1 (hypothetical protein RhiirA5_500820 [Rhizophagus irregularis] >PKC70014.1 hypothetical protein RhiirA1_533009 [Rhizophagus irregularis] >PKY28403.1 hypothetical protein RhiirB3_529821 [Rhizophagus irregularis]) HSP 1 Score: 312.0 bits (798), Expect = 5.400e-81 Identity = 207/696 (29.74%), Postives = 355/696 (51.01%), Query Frame = 0 Query: 26 RRNYDRLSCVIDFLEEPLLVKALGALLIHLQGRVFSLEMAGRVP--VGRLRRFDLAGFVRLDNNALMSLQIFHEEKHPNVINGRGKAKEGFSLFSLLDQTRSRPGRKVLKEWMLRPLRCVEKIEERQMMVELLLQGEAMEVVNNAGRLLGRVGDVGRVLLRVKRAGATVNDWLTLANTAQHVLLLQNCLIVLGHVAIRQERVVEGGKEEGGAARVVRGVLERISGEAVRRVQEVVTCVVDLEITKESKVVAVRTGCDAELDRLRAEYDNLEEFLSGEARDVLAEQASRLLSTVSVQFLPQVGFLVIVQASEKVAVETDPR---FRFVFAEGESVYYKTPRMDVLDDSIGDLAAAIHDREATLLRAVGEEVLKEEVPLTEAVRACAEVDVLLSFAQVAGGLAWVKPMITEDKVVVVKDGRHPLQELAVEVFIPNDVFLVGKGGESSDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGLAVVTGPNFSGKSVYIKTVGVLTYLAHLGCFLPCQQALIGLVDGIYTRIASAETVTVQQSTFTIDCSQMNAVFRNATPSSLILVDEFGKGSAETDGLALLVACLSRLHILG---ARTLVTTHFLELFQRKGLLSPHLAYEISYRMDVFVPXXXXXXXXXXXXXXXXXXIQTVVPLFKLTKGVATSSDGFSCAVLAGLASPLVKRAEHVAR 714 R Y +LSCV++ +E + GAL+ ++ + + P + + +F L F+ ++++AL SLQIF +E HPN ++ R ++KEG SLF +L+ TR+ G+++LK+W LRP ++ I+ER +E LQ + +E L + ++ +++ +K + DW +L A + L ++N + L H E + ++ + E ++ + + + E KE+++V V++ D ELD ++ YD L++FLS AR++ S T++V + PQ+G+L+ V + E D + + F+ +VYYK RM LD+ +GD+ I DRE +++ + + +L+ L A ACAE+D LLS A+ A + +P + + ++ + GRHPLQEL V++F+ ND+ + G G ++ + + +++G N+SGKSVY+K V ++TY+AH+G F+P A IGL D I+TR+ + ETV+ QS F ID Q++ RN+T SL++ DEFGKG+ TDG L + L G + + THF E+F+ LL L ++ M++ + + L++L G +T+S G CA AG+ S +VKRA H+++ Sbjct: 351 RETYLQLSCVVN-MESVETICCAGALISYISRAKITEGIPEDQPLDISEIEQFSLKRFLHINSDALCSLQIFEDESHPN-MHMRARSKEGLSLFGILNNTRTTSGKQLLKQWFLRPTLDLDIIDERHRTIECFLQTDNLENSEQLVSCLKNIKNIPKIIDNMK-GNLNIKDWQSLLQFAFYCLKIRNIVRELNH----SENI-----------QIFTKIKETFIVADLKDIGSYINVIDFDESVKENRIV-VKSHIDEELDHMKRTYDGLDDFLSEVAREISTTIPSEFALTLNVIYFPQLGYLITVPLKPEWKKEDDFKIDGLYYQFSTATTVYYKNDRMKELDEYLGDIHGLIVDREIEIMQKLQDHILEYASLLLNATAACAELDCLLSLAESARKFKYCRPHLVNENILEIVKGRHPLQELCVDIFVANDIKIAGGNGIITNENVDNDSATSSAY-------------------------KSIMLLSGANYSGKSVYLKQVALITYMAHIGSFVPADSATIGLTDKIFTRVQTRETVSKIQSAFMIDLQQISIALRNSTSRSLLIFDEFGKGTGSTDGAGLFCGVIEHLLKRGRDCPKVIAATHFHEIFE-NNLLPQALPISLA-TMEIM----------------RDDEKEELAFLYRLVPGRSTTSWGTFCAAFAGMPSHIVKRASHLSQ 984
BLAST of NO13G01780 vs. NCBI_GenBank
Match: PKK65384.1 (hypothetical protein RhiirC2_853642 [Rhizophagus irregularis]) HSP 1 Score: 312.0 bits (798), Expect = 5.400e-81 Identity = 207/696 (29.74%), Postives = 355/696 (51.01%), Query Frame = 0 Query: 26 RRNYDRLSCVIDFLEEPLLVKALGALLIHLQGRVFSLEMAGRVP--VGRLRRFDLAGFVRLDNNALMSLQIFHEEKHPNVINGRGKAKEGFSLFSLLDQTRSRPGRKVLKEWMLRPLRCVEKIEERQMMVELLLQGEAMEVVNNAGRLLGRVGDVGRVLLRVKRAGATVNDWLTLANTAQHVLLLQNCLIVLGHVAIRQERVVEGGKEEGGAARVVRGVLERISGEAVRRVQEVVTCVVDLEITKESKVVAVRTGCDAELDRLRAEYDNLEEFLSGEARDVLAEQASRLLSTVSVQFLPQVGFLVIVQASEKVAVETDPR---FRFVFAEGESVYYKTPRMDVLDDSIGDLAAAIHDREATLLRAVGEEVLKEEVPLTEAVRACAEVDVLLSFAQVAGGLAWVKPMITEDKVVVVKDGRHPLQELAVEVFIPNDVFLVGKGGESSDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGLAVVTGPNFSGKSVYIKTVGVLTYLAHLGCFLPCQQALIGLVDGIYTRIASAETVTVQQSTFTIDCSQMNAVFRNATPSSLILVDEFGKGSAETDGLALLVACLSRLHILG---ARTLVTTHFLELFQRKGLLSPHLAYEISYRMDVFVPXXXXXXXXXXXXXXXXXXIQTVVPLFKLTKGVATSSDGFSCAVLAGLASPLVKRAEHVAR 714 R Y +LSCV++ +E + GAL+ ++ + + P + + +F L F+ ++++AL SLQIF +E HPN ++ R ++KEG SLF +L+ TR+ G+++LK+W LRP ++ I+ER +E LQ + +E L + ++ +++ +K + DW +L A + L ++N + L H E + ++ + E ++ + + + E KE+++V V++ D ELD ++ YD L++FLS AR++ S T++V + PQ+G+L+ V + E D + + F+ +VYYK RM LD+ +GD+ I DRE +++ + + +L+ L A ACAE+D LLS A+ A + +P + + ++ + GRHPLQEL V++F+ ND+ + G G ++ + + +++G N+SGKSVY+K V ++TY+AH+G F+P A IGL D I+TR+ + ETV+ QS F ID Q++ RN+T SL++ DEFGKG+ TDG L + L G + + THF E+F+ LL L ++ M++ + + L++L G +T+S G CA AG+ S +VKRA H+++ Sbjct: 351 RETYLQLSCVVN-MESVETICCAGALISYISRAKITEGIPEDQPLDISEIEQFSLKRFLHINSDALCSLQIFEDESHPN-MHMRARSKEGLSLFGILNNTRTTSGKQLLKQWFLRPTLDLDIIDERHRTIECFLQTDNLENSEQLVSCLKNIKNIPKIIDNMK-GNLNIKDWQSLLQFAFYCLKIRNIVRELNH----SENI-----------QIFTKIKETFIVADLKDIGSYINVIDFDESVKENRIV-VKSHIDEELDHMKRTYDGLDDFLSEVAREISTTIPSEFALTLNVIYFPQLGYLITVPLKPEWKKEDDFKIDGLYYQFSTATTVYYKNDRMKELDEYLGDIHGLIVDREIEIMQKLQDHILEYASLLLNATAACAELDCLLSLAESARKFKYCRPHLVNENILEIVKGRHPLQELCVDIFVANDIKIAGGNGIITNENVDNDSATSSAY-------------------------KSIMLLSGANYSGKSVYLKQVALITYMAHIGSFVPADSATIGLTDKIFTRVQTRETVSKIQSAFMIDLQQISIALRNSTSRSLLIFDEFGKGTGSTDGAGLFCGVIEHLLKRGRDCPKVIAATHFHEIFE-NNLLPQALPISLA-TMEIM----------------RDDEKEELAFLYRLVPGRSTTSWGTFCAAFAGMPSHIVKRASHLSQ 984
BLAST of NO13G01780 vs. NCBI_GenBank
Match: PKY53075.1 (hypothetical protein RhiirA4_547487 [Rhizophagus irregularis]) HSP 1 Score: 312.0 bits (798), Expect = 5.400e-81 Identity = 206/696 (29.60%), Postives = 354/696 (50.86%), Query Frame = 0 Query: 26 RRNYDRLSCVIDFLEEPLLVKALGALLIHLQGRVFSLEMAGRVP--VGRLRRFDLAGFVRLDNNALMSLQIFHEEKHPNVINGRGKAKEGFSLFSLLDQTRSRPGRKVLKEWMLRPLRCVEKIEERQMMVELLLQGEAMEVVNNAGRLLGRVGDVGRVLLRVKRAGATVNDWLTLANTAQHVLLLQNCLIVLGHVAIRQERVVEGGKEEGGAARVVRGVLERISGEAVRRVQEVVTCVVDLEITKESKVVAVRTGCDAELDRLRAEYDNLEEFLSGEARDVLAEQASRLLSTVSVQFLPQVGFLVIVQASEKVAVETDPR---FRFVFAEGESVYYKTPRMDVLDDSIGDLAAAIHDREATLLRAVGEEVLKEEVPLTEAVRACAEVDVLLSFAQVAGGLAWVKPMITEDKVVVVKDGRHPLQELAVEVFIPNDVFLVGKGGESSDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGLAVVTGPNFSGKSVYIKTVGVLTYLAHLGCFLPCQQALIGLVDGIYTRIASAETVTVQQSTFTIDCSQMNAVFRNATPSSLILVDEFGKGSAETDGLALLVACLSRLHILG---ARTLVTTHFLELFQRKGLLSPHLAYEISYRMDVFVPXXXXXXXXXXXXXXXXXXIQTVVPLFKLTKGVATSSDGFSCAVLAGLASPLVKRAEHVAR 714 R Y +LSCV++ +E + GAL+ ++ + + P + + +F L F+ ++++AL SLQIF +E HPN ++ R ++KEG SLF +L+ TR+ G+++LK+W LRP ++ I+ER +E LQ + +E L + ++ +++ +K + DW +L A + L ++N + L H + ++ + E ++ + + + E KE+++V V++ D ELD ++ YD L++FLS AR++ S T++V + PQ+G+L+ V + E D + + F+ +VYYK RM LD+ +GD+ I DRE +++ + + +L+ L A ACAE+D LLS A+ A + +P + + ++ + GRHPLQEL V++F+ ND+ + G G ++ + + +++G N+SGKSVY+K V ++TY+AH+G F+P A IGL D I+TR+ + ETV+ QS F ID Q++ RN+T SL++ DEFGKG+ TDG L + L G + + THF E+F+ LL L ++ M++ + + L++L G +T+S G CA AG+ S +VKRA H+++ Sbjct: 351 RETYLQLSCVVN-MESVETICCAGALISYISRAKITEGIPEDQPLDISEIEQFSLKRFLHINSDALCSLQIFEDESHPN-MHMRARSKEGLSLFGILNNTRTTSGKQLLKQWFLRPTLDLDIIDERHRTIECFLQTDNLENSEQLVSCLKNIKNIPKIIDNMK-GNLNIKDWQSLLQFAFYCLKIRNIVRELNH---------------SESVQIFTKIKETFIVADLKDIGSYINVIDFDESVKENRIV-VKSHIDEELDHMKRTYDGLDDFLSEVAREISTTIPSEFALTLNVIYFPQLGYLITVPLKPEWKKEDDFKIDGLYYQFSTATTVYYKNDRMKELDEYLGDIHGLIVDREIEIMQKLQDHILEYASLLLNATAACAELDCLLSLAESARKFKYCRPHLVNENILEIVKGRHPLQELCVDIFVANDIKIAGGNGIITNENVDNDSATSSAY-------------------------KSIMLLSGANYSGKSVYLKQVALITYMAHIGSFVPADSATIGLTDKIFTRVQTRETVSKIQSAFMIDLQQISIALRNSTSRSLLIFDEFGKGTGSTDGAGLFCGVIEHLLKRGRDCPKVIAATHFHEIFE-NNLLPQALPISLA-TMEIM----------------RDDEKEELAFLYRLVPGRSTTSWGTFCAAFAGMPSHIVKRASHLSQ 984
BLAST of NO13G01780 vs. NCBI_GenBank
Match: KZV85507.1 (hypothetical protein EXIGLDRAFT_255658 [Exidia glandulosa HHB12029]) HSP 1 Score: 311.6 bits (797), Expect = 7.000e-81 Identity = 225/703 (32.01%), Postives = 351/703 (49.93%), Query Frame = 0 Query: 31 RLSCVIDFLEEPLLVKALGALL--IHLQGRVFSLEMAGRVPVGRLRRFDLAGFVRLDNNALMSLQIFHEEKHPNVINGRGKAKEGFSLFSLLDQTRSRPGRKVLKEWMLRPLRCVEKIEERQMMVELLLQGEAMEVVNNAGRLLGRVGDVGRVLLRVKRAGATVNDWLTLANTAQHVLLLQNCLIVLGHVAIRQERVVEGGKEEGGAARVVRGVLERISGEAVRRVQEVVTCVVDLEITKESKVVAVRTGCDAELDRLRAEYDNLEEFLSGEARDVLAEQASRLLSTVSVQFLPQVGFLVIVQASE---KVAVETDPR-FRFVFAEGESVYYKTPRMDVLDDSIGDLAAAIHDREATLLRAVGEEVLKEEVPLTEAVRACAEVDVLLSFAQVAGGLAWVKPMITEDKVVVVKDGRHPLQELAVEVFIPNDVFLVGKGGESSDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGLAVVTGPNFSGKSVYIKTVGVLTYLAHLGCFLPCQQALIGLVDGIYTRIASAETVTVQQSTFTIDCSQMNAVFRNATPSSLILVDEFGKGSAETDGLALLVACLSRLHILGA---RTLVTTHFLELFQRKGLLSPHLAYEISYRMDVFVPXXXXXXXXXXXXXXXXXXIQTVVPLFKLTKGVATSSDGFSCAVLAGLASPLVKRAEHVARCLVEGTLSIHP 725 R++ ++ PL + + ALL IH L+ V + L +++++ +AL+SLQIF E+ H ++ + K KEG SLF L+ T++R G +L++W LRP +E I ER VE L+ + + V L V +V +L ++R A DW TL A H +L + L L H G +V+ + E + + + E V +D E + ++ V VR D ELD+ + YD L+ F++ + V E ++ ++ ++V + PQ+GFL+ V E + E P + + F ESVY K+ +M +D IGD+ I +RE ++ A+ E ++ + A AE+D LLSFAQ + ++KPM+T + V+ V+ GRHPL E V+ FIPND FLVG G R + V+TG N GKSVY+K V +L ++A +GCF+P + A IGLVD I+TR+ + E+++ QS+F +D +Q++ RN+T SLIL+DEFGKG+ +TDG LLV L L GA R L TTHF ++F R ++ P L +++ + V +V L+K+ G++ S CA + GL P+V RA++V C+V LS+ P Sbjct: 81 RIANFVEAERSPLCMACVNALLEQIHRTRAFGELDTDTHRIVNNIESLRLDQYMQINMDALLSLQIFEEQHHASMHS--DKTKEGLSLFGTLNYTKTRAGYDLLRQWFLRPSLSLETINERHTAVECFLRADNLSVCGALRTHLKGVRNVPHMLTAMQRGRAEARDWETLCKFAFHAAMLADSLEELAH---------------GDDVAIVQKLKECLDTADFKVMGEEVNSTIDWEASALNQRVCVRPLIDPELDQYKELYDGLDSFMNHVSAQVAMEVSADVVPALNVVYFPQIGFLICVPKPEGWRREEPELGPSDWTYSFHTEESVYLKSDKMHDVDHHIGDIQTMIAERELEIVHALYERIVPYAPAVGAACGVMAELDCLLSFAQASLIHGYIKPMMTNENVLAVRGGRHPLHEQVVDTFIPNDSFLVGGIG---------------IGVADGDEEEADNADDGGDDGILQQTERSVMVITGANACGKSVYLKQVALLQFMAQIGCFVPVESATIGLVDKIFTRVQARESISKIQSSFMLDLNQVSLALRNSTARSLILLDEFGKGTLDTDGAGLLVGVLRHLLGRGADCPRVLATTHFRDVF-RADIVPPSLPLLLAHMRVMLV---------------REEGADGIVYLYKVAPGLSLESHAAKCAAVCGLPKPVVDRAQYVT-CVV--ALSLFP 732
BLAST of NO13G01780 vs. NCBI_GenBank
Match: EJK76509.1 (hypothetical protein THAOC_01722, partial [Thalassiosira oceanica]) HSP 1 Score: 311.2 bits (796), Expect = 9.200e-81 Identity = 257/802 (32.04%), Postives = 369/802 (46.01%), Query Frame = 0 Query: 28 NYDRLSCVIDFLEEPLLVKALGALLIHLQGRVFSLEMAGRVPVGRLRRFDLA-GFVRLDNNALMSLQIFHEEKHPNVINGRGK------AKEGFSLFSLLDQTRSRPGRKVLKEWMLRPLRCVEKIEERQMMVELLLQGEAMEVVNNAGRLLGRVGDVGRVLLRVKRAGATVNDWLTLANTAQHVLLLQNCLI------------VLGHVAIRQERVVEG--GKEEGGAARVVRGVLERISGEAVRRVQEVVTCVVDLEITKESK-VVAVRTGCDAELDRLRAEYDNLEEFLSGEARDVLAEQASRLLSTVSVQFLPQVGFLVIV---QASEKVAVETDPR----FRFVFAEGESVYYKTPRMDVLDDSIGDLAAAIHDREATLLRAVGEEVLKEEVPLTEAVRACAEVDVLLSFAQVAGGLAWVKPMITE--DKVVVVKDGRHPLQELAVEVFIPNDVFLVGKGGESSDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGLAVVTGPNFSGKSVYIKTVGVLTYLAHLGCFLPCQQALIGLVDGIYTRIASAETVTVQQSTFTIDCSQMNAVFRNATPSSLILVDEFGKGSAETDGLALLVACLSRLHILGARTLVTTHFLELFQRKGLLSPHLAYEISYRMDVFVPXXXXXXXXXXXXXXXXXXIQTVVPLFKLTKGVATSSDGFSCAVLAGLASPLVKRAEHVARCLVEGTLSIHPLPRPLSWRKEGXXXXXXXXXXXXXXXXXXXXXXXXXREVLRYNKEAQEVLRAFMAVEDWTECGEKETQQFVELL 799 NY L+ VIDF E P LV+ALGALL +L+ F LE V + +RR + F+RL+ + +L+IF + HP V N K +KEGFSL++LLD+T+S+ GR+ L++WM +PLR KI +R ++L L E V+ L V + +L+R++R ND+L L + + L G + + EG KE + + +L R R ++E + V+D+EIT E+K V + G ELDR + ++ L+E LS R VL ++ L+S L VGFL+ + Q + A T P F FVF + + D EA ++ + EE+L+ E L A +++D +LS A A L +VKP I + + +++GRHPLQEL V+ FIPND + SDR + VVTGPNFSGKS Y + VGVL Y+ HLG FLPC A I L D I A E+ V QSTF D + + + R ATP +L L+DEFGKG+A G+A++V+ + +L R +VTTHFLE+F GLL + +M VFVP VPLFKL GVA+SS G A LAGL +V RA+ + + L G + PLP L+ + + +R F+AV+ WT ++E + EL+ Sbjct: 207 NYHSLASVIDF-ESPTLVRALGALLTYLRQTAFRLEEGFTVTINNIRRCPASESFLRLEAASFRTLRIFATDHHPLVANNNVKGRSYNQSKEGFSLYTLLDRTKSKAGRERLRQWMTQPLRDAAKIRQRHTAIDLFLHPECHPAVSLVLERLSDVVSMDAILMRMQRCSTQPNDFLVLIRMLDAAYAIVSTLSGDLREKAYMLDREAGFNGMADDAGGEGELNKELYPSVAYIDDLLRRCHVPVTRDLREKMIAVIDVEITSETKDHVIINWGYHDELDRAKETFETLDETLSEVGRQVL-QKHQELIS------LKVVGFLISIDKRQHNHDEATNTFPSVPDDFEFVFTQ------------------------VKDTEAMVVSNLEEEILEVESELRSTFSALSDLDCILSLAGCAADLNFVKPEIAAEGEGAIQIENGRHPLQELIVD-FIPNDTQM------DSDRR--------------------------------------MLVVTGPNFSGKSCYARQVGVLVYMLHLGSFLPCDSARISLFDQILVGFADVESCAVPQSTFQRDLTAIAGIMRKATPKTLALIDEFGKGTAPASGIAVMVSAIQQLCKKKCRAVVTTHFLEMFS-LGLLEDGKGSVKAVQMSVFVPESED---------------DDAVPLFKLEDGVASSSAGLVVARLAGLNKKVVNRADGIIQALRSGR-QVKPLPESLNCNSP-------------------------------FQPGVKSAIRLFLAVDGWTGANDEEIELLDELV 883
BLAST of NO13G01780 vs. NCBI_GenBank
Match: XP_008890468.1 (hypothetical protein PPTG_00750 [Phytophthora parasitica INRA-310] >ETI56632.1 hypothetical protein F443_00885 [Phytophthora parasitica P1569] >ETM02889.1 hypothetical protein L917_00784 [Phytophthora parasitica] >ETM56118.1 hypothetical protein L914_00814 [Phytophthora parasitica] >ETN24403.1 hypothetical protein PPTG_00750 [Phytophthora parasitica INRA-310] >ETO85378.1 hypothetical protein F444_00893 [Phytophthora parasitica P1976]) HSP 1 Score: 310.1 bits (793), Expect = 2.000e-80 Identity = 234/729 (32.10%), Postives = 352/729 (48.29%), Query Frame = 0 Query: 26 RRNYDRLSCVIDFLEEPLLVKALGALLIHL---------QGRVFSLEMAGRVPVGR------------LRRFDLAGFVRLDNNALMSLQIFHEEKHPNVINGRGKAKEGFSLFSLLDQTRSRPGRKVLKEWMLRPLRCVEKIEERQMMVELLLQGEAMEVVNNAGRLLGRVGDVGRVLLRVKRAGATVNDWLTLANTAQHVLLLQNCLIVLGHVAIRQERVVEGGKEEGGAARVVRGVLERISGE-AVRRVQEVVTCVVDLEITKESKVVAVRTGCDAELDRLRAEYDNLEEFLSGEARDVLAEQASRLLSTVSVQFLPQVGFLVIVQASEKVAVETDPRFRFVFAEGESV-YYKTPRMDVLDDSIGDLAAAIHDREATLLRAVGEEVLKEEVPLTEAVRACAEVDVLLSFAQVAGGLAWVKPMITEDKVVVVKDGRHPLQELAVEVFIPNDVFLVGKGGESSDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGLAVVTGPNFSGKSVYIKTVGVLTYLAHLGCFLPCQQALIGLVDGIYTRIASAETVTVQQSTFTIDCSQMNAVFRNATPSSLILVDEFGKGSAETDGLALLVACLS-----RLHILGARTLVTTHFLELFQRKGLLSPHLAYEISYRMD--------VFVPXXXXXXXXXXXXXXXXXXIQTVVPLFKLTKGVATSSDGFSCAVLAGLASPLVKRAEHVARCLVEG 719 R Y L +F E L++A GALL++L + F + + +G + + L GF+ +D + L SLQIF+ E HP+++ G G+AKEGFSLF LL++T ++ G +L+ WML PL I ER V E E+ LL DV + R+KR A+V DW + L Q+ ++E E + + V R+ E V V ++ VVD E +++ V +R+G LD R Y++L+ L+ A V ++A+ +LS+++VQ++PQVG+++ ++ T P F F F E ++ YYK LD+SIGD+ I D + LL + +L+ E + E + +D L+SFA A + +P+I+E + RHPLQEL VE +IPND+FL +SSD + VVTG N SGKSVY+K VG+L Y+A +G F+P ++A IGLV ++TRI S E+ TV QS+FTIDC+QM + + SL L+DEFGKG+AE DG+ALL + ++ RL R ++TTHFLE+F R LL P L S R + + PL++L G+++ S+ +CA G+ +V+RA+ V C G Sbjct: 147 REAYTFLGSFFNF-ESTQLIRATGALLLYLATEKVRGVAERVKFIQYVTSNLQIGNQLDDSESLYFSTVEQVALDGFMYIDKSTLQSLQIFNHEAHPSLVKGSGRAKEGFSLFGLLNRTVTKSGGSMLRRWMLTPLVSNTHINERHNSVAFFTDTENDEL---RQLLLKHFRDVAGIFQRIKRRCASVGDWCRFITSIGSFLEAQS--------------LIEDASET--SISPLPSVFSRVKSERGVTHVSNLLGNVVDFEESQQESTVVIRSGISDTLDAARQRYEDLDNVLTEVAFQV--QEANPVLSSITVQYIPQVGYVICCESP-----TTLPDFVFQFQEDDTTFYYKDACCRDLDESIGDIYGYILDLQRELLEELTMALLEYEGSIHEMTWIMSNLDCLISFASCAKSFNFTRPLISEGSTLKATQARHPLQELLVERYIPNDIFL-----DSSD---------------------------------------SITVVTGHNGSGKSVYLKMVGLLQYMAQIGSFVPAEKAEIGLVTKVFTRIQSMESATVSQSSFTIDCNQMAWMLNHGDGRSLFLIDEFGKGTAELDGIALLSSIINYLATKRLTPGRPRVVMTTHFLEIF-RNDLLEPELIVNPSLRQNEGEQREGSPTTARVVCTVMASTDAPESYSATSSAAPLYELRHGISSHSNALTCAAKCGIPLTMVQRAQEVLECTKRG 803
BLAST of NO13G01780 vs. NCBI_GenBank
Match: XP_008890471.1 (hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >ETI56634.1 hypothetical protein, variant 2 [Phytophthora parasitica P1569] >ETK96468.1 hypothetical protein L915_00826 [Phytophthora parasitica] >ETL49824.1 hypothetical protein L916_00816 [Phytophthora parasitica] >ETM02891.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETM56120.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETN24405.1 hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >ETO85380.1 hypothetical protein, variant 2 [Phytophthora parasitica P1976] >ETP26474.1 hypothetical protein F441_00861 [Phytophthora parasitica CJ01A1] >ETP54471.1 hypothetical protein F442_00839 [Phytophthora parasitica P10297]) HSP 1 Score: 310.1 bits (793), Expect = 2.000e-80 Identity = 234/729 (32.10%), Postives = 352/729 (48.29%), Query Frame = 0 Query: 26 RRNYDRLSCVIDFLEEPLLVKALGALLIHL---------QGRVFSLEMAGRVPVGR------------LRRFDLAGFVRLDNNALMSLQIFHEEKHPNVINGRGKAKEGFSLFSLLDQTRSRPGRKVLKEWMLRPLRCVEKIEERQMMVELLLQGEAMEVVNNAGRLLGRVGDVGRVLLRVKRAGATVNDWLTLANTAQHVLLLQNCLIVLGHVAIRQERVVEGGKEEGGAARVVRGVLERISGE-AVRRVQEVVTCVVDLEITKESKVVAVRTGCDAELDRLRAEYDNLEEFLSGEARDVLAEQASRLLSTVSVQFLPQVGFLVIVQASEKVAVETDPRFRFVFAEGESV-YYKTPRMDVLDDSIGDLAAAIHDREATLLRAVGEEVLKEEVPLTEAVRACAEVDVLLSFAQVAGGLAWVKPMITEDKVVVVKDGRHPLQELAVEVFIPNDVFLVGKGGESSDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGLAVVTGPNFSGKSVYIKTVGVLTYLAHLGCFLPCQQALIGLVDGIYTRIASAETVTVQQSTFTIDCSQMNAVFRNATPSSLILVDEFGKGSAETDGLALLVACLS-----RLHILGARTLVTTHFLELFQRKGLLSPHLAYEISYRMD--------VFVPXXXXXXXXXXXXXXXXXXIQTVVPLFKLTKGVATSSDGFSCAVLAGLASPLVKRAEHVARCLVEG 719 R Y L +F E L++A GALL++L + F + + +G + + L GF+ +D + L SLQIF+ E HP+++ G G+AKEGFSLF LL++T ++ G +L+ WML PL I ER V E E+ LL DV + R+KR A+V DW + L Q+ ++E E + + V R+ E V V ++ VVD E +++ V +R+G LD R Y++L+ L+ A V ++A+ +LS+++VQ++PQVG+++ ++ T P F F F E ++ YYK LD+SIGD+ I D + LL + +L+ E + E + +D L+SFA A + +P+I+E + RHPLQEL VE +IPND+FL +SSD + VVTG N SGKSVY+K VG+L Y+A +G F+P ++A IGLV ++TRI S E+ TV QS+FTIDC+QM + + SL L+DEFGKG+AE DG+ALL + ++ RL R ++TTHFLE+F R LL P L S R + + PL++L G+++ S+ +CA G+ +V+RA+ V C G Sbjct: 119 REAYTFLGSFFNF-ESTQLIRATGALLLYLATEKVRGVAERVKFIQYVTSNLQIGNQLDDSESLYFSTVEQVALDGFMYIDKSTLQSLQIFNHEAHPSLVKGSGRAKEGFSLFGLLNRTVTKSGGSMLRRWMLTPLVSNTHINERHNSVAFFTDTENDEL---RQLLLKHFRDVAGIFQRIKRRCASVGDWCRFITSIGSFLEAQS--------------LIEDASET--SISPLPSVFSRVKSERGVTHVSNLLGNVVDFEESQQESTVVIRSGISDTLDAARQRYEDLDNVLTEVAFQV--QEANPVLSSITVQYIPQVGYVICCESP-----TTLPDFVFQFQEDDTTFYYKDACCRDLDESIGDIYGYILDLQRELLEELTMALLEYEGSIHEMTWIMSNLDCLISFASCAKSFNFTRPLISEGSTLKATQARHPLQELLVERYIPNDIFL-----DSSD---------------------------------------SITVVTGHNGSGKSVYLKMVGLLQYMAQIGSFVPAEKAEIGLVTKVFTRIQSMESATVSQSSFTIDCNQMAWMLNHGDGRSLFLIDEFGKGTAELDGIALLSSIINYLATKRLTPGRPRVVMTTHFLEIF-RNDLLEPELIVNPSLRQNEGEQREGSPTTARVVCTVMASTDAPESYSATSSAAPLYELRHGISSHSNALTCAAKCGIPLTMVQRAQEVLECTKRG 775
BLAST of NO13G01780 vs. NCBI_GenBank
Match: KZV92588.1 (hypothetical protein EXIGLDRAFT_836379 [Exidia glandulosa HHB12029]) HSP 1 Score: 309.7 bits (792), Expect = 2.700e-80 Identity = 219/690 (31.74%), Postives = 343/690 (49.71%), Query Frame = 0 Query: 31 RLSCVIDFLEEPLLVKALGALL--IHLQGRVFSLEMAGRVPVGRLRRFDLAGFVRLDNNALMSLQIFHEEKHPNVINGRGKAKEGFSLFSLLDQTRSRPGRKVLKEWMLRPLRCVEKIEERQMMVELLLQGEAMEVVNNAGRLLGRVGDVGRVLLRVKRAGATVNDWLTLANTAQHVLLLQNCLIVLGHVAIRQERVVEGGKEEGGAARVVRGVLERISGEAVRRVQEVVTCVVDLEITKESKVVAVRTGCDAELDRLRAEYDNLEEFLSGEARDVLAEQASRLLSTVSVQFLPQVGFLVIVQASEKVAVET----DPRFRFVFAEGESVYYKTPRMDVLDDSIGDLAAAIHDREATLLRAVGEEVLKEEVPLTEAVRACAEVDVLLSFAQVAGGLAWVKPMITEDKVVVVKDGRHPLQELAVEVFIPNDVFLVGKGGESSDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGLAVVTGPNFSGKSVYIKTVGVLTYLAHLGCFLPCQQALIGLVDGIYTRIASAETVTVQQSTFTIDCSQMNAVFRNATPSSLILVDEFGKGSAETDGLALLVACLSRLHILGA---RTLVTTHFLELFQRKGLLSPHLAYEISYRMDVFVPXXXXXXXXXXXXXXXXXXIQTVVPLFKLTKGVATSSDGFSCAVLAGLASPLVKRAEHV 712 R++ ++ PL + + ALL IH L+ V + L +++++ +AL+SLQIF E+ H ++ + K KEG SLF L+ T++R G +L++W LRP +E I ER VE L+ + + V L V +V +L ++R A DW TL A H +L + L LGH G +V+ + E + + + E V +D E + ++ V VR D ELD+ + YD L+ F++ + V E ++ ++ ++V + PQ+GFL+ V E E P + + F ESVY K+ +M +D IGD+ I +RE ++ A+ E ++ + A AE+D LLSFAQ + +++P +T + V+ V+ GRHPL E V+ FIPND FLVG G R + V+TG N GKSVY+K V +L ++A +GCF+P + A IGLVD I+TR+ + E+++ QS+F +D +Q++ RN+T SLIL+DEFGKG+ +TDG LLV L L GA R L TTHF ++F R ++ P L +++ + V +V L+K+ G++ S CA + GL P+V RA++V Sbjct: 218 RIANFVEAERSPLCLACVNALLEQIHRTRAFGELDTDTHRIVNNIEILRLDQYMQINMDALLSLQIFEEQHHASMHS--DKTKEGLSLFGTLNYTKTRAGYDLLRQWFLRPSLSLETINERHTAVECFLRADNLSVCGALRTHLKGVRNVPHMLTAMQRGRAEARDWETLCKFAFHAAMLADSLEELGH---------------GDDVAIVQKLKECLDTADFKVMGEEVNSTIDWEASALNQRVCVRPLIDPELDQYKELYDGLDSFMNHVSAQVAMEVSADVVPALNVVYFPQIGFLICVPKPEGWRREEPELGPPDWTYSFHTEESVYLKSDKMHDVDHHIGDIQTMIAERELEIVHALYERIVPYAPAVGAACSVMAELDCLLSFAQASLIHGYIRPTMTNENVLAVRGGRHPLHEQVVDTFIPNDSFLVGGIG---------------IGVADGDEDEADNADDGGDDGILQQTERSVMVITGANACGKSVYLKQVALLQFMAQIGCFVPVESATIGLVDKIFTRVQARESISKIQSSFMLDLNQVSLALRNSTARSLILLDEFGKGTLDTDGAGLLVGVLRHLLGRGADCPRVLATTHFRDVF-RADIVPPSLPLLLAHMRVMLV---------------REEGADGIVYLYKVAPGLSLESHAAKCAAVCGLPKPVVDRAQYV 859
BLAST of NO13G01780 vs. NCBI_GenBank
Match: EXX78176.1 (MutS family protein MSH5 [Rhizophagus irregularis DAOM 197198w]) HSP 1 Score: 308.9 bits (790), Expect = 4.600e-80 Identity = 208/704 (29.55%), Postives = 355/704 (50.43%), Query Frame = 0 Query: 26 RRNYDRLSCVIDFLEEPLLVKALGALLIHLQGRVFSLEMAGRVP--VGRLRRFDLAGFVRLDNNALMSLQIFHEEKHPNVINGRGKAKEGFSLFSLLDQTRSRPGRKVLKEWMLRPLRCVEKIEERQMMVELLLQGEAMEVVNNAGRLLGRVGDVGRVLLRVKRAGATVNDWLTLANTAQHVLLLQNCLIVLGH-------VAIRQERVVEGGKEEGGAARVVRGVLERISGEAVRRVQE-VVTCVVDLEITKESKVVAVRTGCDAELDRLRAEYDNLEEFLSGEARDVLAEQASRLLSTVSVQFLPQVGFLVIVQASEKVAVETDPR---FRFVFAEGESVYYKTPRMDVLDDSIGDLAAAIHDREATLLRAVGEEVLKEEVPLTEAVRACAEVDVLLSFAQVAGGLAWVKPMITEDKVVVVKDGRHPLQELAVEVFIPNDVFLVGKGGESSDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGLAVVTGPNFSGKSVYIKTVGVLTYLAHLGCFLPCQQALIGLVDGIYTRIASAETVTVQQSTFTIDCSQMNAVFRNATPSSLILVDEFGKGSAETDGLALLVACLSRLHILG---ARTLVTTHFLELFQRKGLLSPHLAYEISYRMDVFVPXXXXXXXXXXXXXXXXXXIQTVVPLFKLTKGVATSSDGFSCAVLAGLASPLVKRAEHVAR 714 R Y +LSCV++ +E + GAL+ ++ + + P + + +F L + L AL SLQIF +E HPN ++ R ++KEG SLF +L+ TR+ G+++LK+W LRP ++ I+ER +E LQ + +E L + ++ +++ +K + DW +L A + L ++N + L H I++ +V K+ G VV ++ + + + + +D + + + + V++ D ELD ++ YD L++FLS AR++ S T++V + PQ+G+L+ V + E D + + F+ +VYYK RM LD+ +GD+ I DRE +++ + + +L+ L A ACAE+D LLS A+ A + +P + + ++ + GRHPLQEL V++F+ ND+ + G G ++ + + +++G N+SGKSVY+K V ++TY+AH+G F+P A IGL D I+TR+ + ETV+ QS F ID Q++ RN+T SL++ DEFGKG+ TDG L + L G + + THF E+F+ LL L ++ M++ + + L++L G +T+S G CA AG+ S +VKRA H+++ Sbjct: 351 RETYLQLSCVVN-MESVETICCAGALISYISRAKITEGIPEDQPLDISEIEQFSLYETIFLVAYALCSLQIFEDESHPN-MHMRARSKEGLSLFGILNNTRTTSGKQLLKQWFLRPTLDLDIIDERHRTIECFLQTDNLENSEQLVSCLKNIKNIPKIIDNMK-GNLNIKDWQSLLQFAFYCLKIRNIVRELNHSENIQIFTKIKETFIVADLKDIGSYINVVNSMIVCLKYCTLTEINKYTFVKKIDFDESVKENRIVVKSHIDEELDHMKRTYDGLDDFLSEVAREISTTIPSEFALTLNVIYFPQLGYLITVPLKPEWKKEDDFKIDGLYYQFSTATTVYYKNDRMKELDEYLGDIHGLIVDREIEIMQKLQDHILEYASLLLNATAACAELDCLLSLAESARKFKYCRPHLVNENILEIVKGRHPLQELCVDIFVANDIKIAGGNGIITNENVDNDSATSSAY-------------------------KSIMLLSGANYSGKSVYLKQVALITYMAHIGSFVPADSATIGLTDKIFTRVQTRETVSKIQSAFMIDLQQISIALRNSTSRSLLIFDEFGKGTGSTDGAGLFCGVIEHLLKRGRDCPKVIAATHFHEIFE-NNLLPQALPISLA-TMEIM----------------RDDEKEELAFLYRLVPGRSTTSWGTFCAAFAGMPSHIVKRASHLSQ 1008 The following BLAST results are available for this feature:
BLAST of NO13G01780 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
The following polypeptide feature(s) derives from this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G01780 ID=NO13G01780|Name=NO13G01780|organism=Nannochloropsis oceanica|type=gene|length=4278bpback to top protein sequence of NO13G01780.4 >NO13G01780.4-protein ID=NO13G01780.4-protein|Name=NO13G01780.4|organism=Nannochloropsis oceanica|type=polypeptide|length=802bpback to top protein sequence of NO13G01780.3 >NO13G01780.3-protein ID=NO13G01780.3-protein|Name=NO13G01780.3|organism=Nannochloropsis oceanica|type=polypeptide|length=802bpback to top protein sequence of NO13G01780.2 >NO13G01780.2-protein ID=NO13G01780.2-protein|Name=NO13G01780.2|organism=Nannochloropsis oceanica|type=polypeptide|length=933bpback to top protein sequence of NO13G01780.1 >NO13G01780.1-protein ID=NO13G01780.1-protein|Name=NO13G01780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=992bpback to top Synonyms
Publications
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