NO13G01780, NO13G01780 (gene) Nannochloropsis oceanica

Overview
NameNO13G01780
Unique NameNO13G01780
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4278
Alignment locationchr13:521299..525576 -

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Properties
Property NameValue
DescriptionMismatch repair protein 5
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:521299..525576 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006298mismatch repair
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0030983mismatched DNA binding
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR036187DNA_mismatch_repair_MutS_sf
IPR027417P-loop_NTPase
IPR007861DNA_mismatch_repair_MutS_clamp
IPR007696DNA_mismatch_repair_MutS_core
IPR000432DNA_mismatch_repair_MutS_C
Homology
BLAST of NO13G01780 vs. NCBI_GenBank
Match: GBC38566.1 (DNA mismatch repair protein Msh5 [Rhizophagus irregularis DAOM 181602])

HSP 1 Score: 312.0 bits (798), Expect = 5.400e-81
Identity = 207/696 (29.74%), Postives = 355/696 (51.01%), Query Frame = 0
Query:   26 RRNYDRLSCVIDFLEEPLLVKALGALLIHLQGRVFSLEMAGRVP--VGRLRRFDLAGFVRLDNNALMSLQIFHEEKHPNVINGRGKAKEGFSLFSLLDQTRSRPGRKVLKEWMLRPLRCVEKIEERQMMVELLLQGEAMEVVNNAGRLLGRVGDVGRVLLRVKRAGATVNDWLTLANTAQHVLLLQNCLIVLGHVAIRQERVVEGGKEEGGAARVVRGVLERISGEAVRRVQEVVTCVVDLEITKESKVVAVRTGCDAELDRLRAEYDNLEEFLSGEARDVLAEQASRLLSTVSVQFLPQVGFLVIVQASEKVAVETDPR---FRFVFAEGESVYYKTPRMDVLDDSIGDLAAAIHDREATLLRAVGEEVLKEEVPLTEAVRACAEVDVLLSFAQVAGGLAWVKPMITEDKVVVVKDGRHPLQELAVEVFIPNDVFLVGKGGESSDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGLAVVTGPNFSGKSVYIKTVGVLTYLAHLGCFLPCQQALIGLVDGIYTRIASAETVTVQQSTFTIDCSQMNAVFRNATPSSLILVDEFGKGSAETDGLALLVACLSRLHILG---ARTLVTTHFLELFQRKGLLSPHLAYEISYRMDVFVPXXXXXXXXXXXXXXXXXXIQTVVPLFKLTKGVATSSDGFSCAVLAGLASPLVKRAEHVAR 714
            R  Y +LSCV++ +E    +   GAL+ ++     +  +    P  +  + +F L  F+ ++++AL SLQIF +E HPN ++ R ++KEG SLF +L+ TR+  G+++LK+W LRP   ++ I+ER   +E  LQ + +E        L  + ++ +++  +K     + DW +L   A + L ++N +  L H     E +           ++   + E      ++ +   +  +   E  KE+++V V++  D ELD ++  YD L++FLS  AR++     S    T++V + PQ+G+L+ V    +   E D +     + F+   +VYYK  RM  LD+ +GD+   I DRE  +++ + + +L+    L  A  ACAE+D LLS A+ A    + +P +  + ++ +  GRHPLQEL V++F+ ND+ + G  G  ++                                      + + +++G N+SGKSVY+K V ++TY+AH+G F+P   A IGL D I+TR+ + ETV+  QS F ID  Q++   RN+T  SL++ DEFGKG+  TDG  L    +  L   G    + +  THF E+F+   LL   L   ++  M++                      + +  L++L  G +T+S G  CA  AG+ S +VKRA H+++
Sbjct:  246 RETYLQLSCVVN-MESVETICCAGALISYISRAKITEGIPEDQPLDISEIEQFSLKRFLHINSDALCSLQIFEDESHPN-MHMRARSKEGLSLFGILNNTRTTSGKQLLKQWFLRPTLDLDIIDERHRTIECFLQTDNLENSEQLVSCLKNIKNIPKIIDNMK-GNLNIKDWQSLLQFAFYCLKIRNIVRELNH----SENI-----------QIFTKIKETFIVADLKDIGSYINVIDFDESVKENRIV-VKSHIDEELDHMKRTYDGLDDFLSEVAREISTTIPSEFALTLNVIYFPQLGYLITVPLKPEWKKEDDFKIDGLYYQFSTATTVYYKNDRMKELDEYLGDIHGLIVDREIEIMQKLQDHILEYASLLLNATAACAELDCLLSLAESARKFKYCRPHLVNENILEIVKGRHPLQELCVDIFVANDIKIAGGNGIITNENVDNDSATSSAY-------------------------KSIMLLSGANYSGKSVYLKQVALITYMAHIGSFVPADSATIGLTDKIFTRVQTRETVSKIQSAFMIDLQQISIALRNSTSRSLLIFDEFGKGTGSTDGAGLFCGVIEHLLKRGRDCPKVIAATHFHEIFE-NNLLPQALPISLA-TMEIM----------------RDDEKEELAFLYRLVPGRSTTSWGTFCAAFAGMPSHIVKRASHLSQ 879          
BLAST of NO13G01780 vs. NCBI_GenBank
Match: PKC07226.1 (hypothetical protein RhiirA5_500820 [Rhizophagus irregularis] >PKC70014.1 hypothetical protein RhiirA1_533009 [Rhizophagus irregularis] >PKY28403.1 hypothetical protein RhiirB3_529821 [Rhizophagus irregularis])

HSP 1 Score: 312.0 bits (798), Expect = 5.400e-81
Identity = 207/696 (29.74%), Postives = 355/696 (51.01%), Query Frame = 0
Query:   26 RRNYDRLSCVIDFLEEPLLVKALGALLIHLQGRVFSLEMAGRVP--VGRLRRFDLAGFVRLDNNALMSLQIFHEEKHPNVINGRGKAKEGFSLFSLLDQTRSRPGRKVLKEWMLRPLRCVEKIEERQMMVELLLQGEAMEVVNNAGRLLGRVGDVGRVLLRVKRAGATVNDWLTLANTAQHVLLLQNCLIVLGHVAIRQERVVEGGKEEGGAARVVRGVLERISGEAVRRVQEVVTCVVDLEITKESKVVAVRTGCDAELDRLRAEYDNLEEFLSGEARDVLAEQASRLLSTVSVQFLPQVGFLVIVQASEKVAVETDPR---FRFVFAEGESVYYKTPRMDVLDDSIGDLAAAIHDREATLLRAVGEEVLKEEVPLTEAVRACAEVDVLLSFAQVAGGLAWVKPMITEDKVVVVKDGRHPLQELAVEVFIPNDVFLVGKGGESSDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGLAVVTGPNFSGKSVYIKTVGVLTYLAHLGCFLPCQQALIGLVDGIYTRIASAETVTVQQSTFTIDCSQMNAVFRNATPSSLILVDEFGKGSAETDGLALLVACLSRLHILG---ARTLVTTHFLELFQRKGLLSPHLAYEISYRMDVFVPXXXXXXXXXXXXXXXXXXIQTVVPLFKLTKGVATSSDGFSCAVLAGLASPLVKRAEHVAR 714
            R  Y +LSCV++ +E    +   GAL+ ++     +  +    P  +  + +F L  F+ ++++AL SLQIF +E HPN ++ R ++KEG SLF +L+ TR+  G+++LK+W LRP   ++ I+ER   +E  LQ + +E        L  + ++ +++  +K     + DW +L   A + L ++N +  L H     E +           ++   + E      ++ +   +  +   E  KE+++V V++  D ELD ++  YD L++FLS  AR++     S    T++V + PQ+G+L+ V    +   E D +     + F+   +VYYK  RM  LD+ +GD+   I DRE  +++ + + +L+    L  A  ACAE+D LLS A+ A    + +P +  + ++ +  GRHPLQEL V++F+ ND+ + G  G  ++                                      + + +++G N+SGKSVY+K V ++TY+AH+G F+P   A IGL D I+TR+ + ETV+  QS F ID  Q++   RN+T  SL++ DEFGKG+  TDG  L    +  L   G    + +  THF E+F+   LL   L   ++  M++                      + +  L++L  G +T+S G  CA  AG+ S +VKRA H+++
Sbjct:  351 RETYLQLSCVVN-MESVETICCAGALISYISRAKITEGIPEDQPLDISEIEQFSLKRFLHINSDALCSLQIFEDESHPN-MHMRARSKEGLSLFGILNNTRTTSGKQLLKQWFLRPTLDLDIIDERHRTIECFLQTDNLENSEQLVSCLKNIKNIPKIIDNMK-GNLNIKDWQSLLQFAFYCLKIRNIVRELNH----SENI-----------QIFTKIKETFIVADLKDIGSYINVIDFDESVKENRIV-VKSHIDEELDHMKRTYDGLDDFLSEVAREISTTIPSEFALTLNVIYFPQLGYLITVPLKPEWKKEDDFKIDGLYYQFSTATTVYYKNDRMKELDEYLGDIHGLIVDREIEIMQKLQDHILEYASLLLNATAACAELDCLLSLAESARKFKYCRPHLVNENILEIVKGRHPLQELCVDIFVANDIKIAGGNGIITNENVDNDSATSSAY-------------------------KSIMLLSGANYSGKSVYLKQVALITYMAHIGSFVPADSATIGLTDKIFTRVQTRETVSKIQSAFMIDLQQISIALRNSTSRSLLIFDEFGKGTGSTDGAGLFCGVIEHLLKRGRDCPKVIAATHFHEIFE-NNLLPQALPISLA-TMEIM----------------RDDEKEELAFLYRLVPGRSTTSWGTFCAAFAGMPSHIVKRASHLSQ 984          
BLAST of NO13G01780 vs. NCBI_GenBank
Match: PKK65384.1 (hypothetical protein RhiirC2_853642 [Rhizophagus irregularis])

HSP 1 Score: 312.0 bits (798), Expect = 5.400e-81
Identity = 207/696 (29.74%), Postives = 355/696 (51.01%), Query Frame = 0
Query:   26 RRNYDRLSCVIDFLEEPLLVKALGALLIHLQGRVFSLEMAGRVP--VGRLRRFDLAGFVRLDNNALMSLQIFHEEKHPNVINGRGKAKEGFSLFSLLDQTRSRPGRKVLKEWMLRPLRCVEKIEERQMMVELLLQGEAMEVVNNAGRLLGRVGDVGRVLLRVKRAGATVNDWLTLANTAQHVLLLQNCLIVLGHVAIRQERVVEGGKEEGGAARVVRGVLERISGEAVRRVQEVVTCVVDLEITKESKVVAVRTGCDAELDRLRAEYDNLEEFLSGEARDVLAEQASRLLSTVSVQFLPQVGFLVIVQASEKVAVETDPR---FRFVFAEGESVYYKTPRMDVLDDSIGDLAAAIHDREATLLRAVGEEVLKEEVPLTEAVRACAEVDVLLSFAQVAGGLAWVKPMITEDKVVVVKDGRHPLQELAVEVFIPNDVFLVGKGGESSDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGLAVVTGPNFSGKSVYIKTVGVLTYLAHLGCFLPCQQALIGLVDGIYTRIASAETVTVQQSTFTIDCSQMNAVFRNATPSSLILVDEFGKGSAETDGLALLVACLSRLHILG---ARTLVTTHFLELFQRKGLLSPHLAYEISYRMDVFVPXXXXXXXXXXXXXXXXXXIQTVVPLFKLTKGVATSSDGFSCAVLAGLASPLVKRAEHVAR 714
            R  Y +LSCV++ +E    +   GAL+ ++     +  +    P  +  + +F L  F+ ++++AL SLQIF +E HPN ++ R ++KEG SLF +L+ TR+  G+++LK+W LRP   ++ I+ER   +E  LQ + +E        L  + ++ +++  +K     + DW +L   A + L ++N +  L H     E +           ++   + E      ++ +   +  +   E  KE+++V V++  D ELD ++  YD L++FLS  AR++     S    T++V + PQ+G+L+ V    +   E D +     + F+   +VYYK  RM  LD+ +GD+   I DRE  +++ + + +L+    L  A  ACAE+D LLS A+ A    + +P +  + ++ +  GRHPLQEL V++F+ ND+ + G  G  ++                                      + + +++G N+SGKSVY+K V ++TY+AH+G F+P   A IGL D I+TR+ + ETV+  QS F ID  Q++   RN+T  SL++ DEFGKG+  TDG  L    +  L   G    + +  THF E+F+   LL   L   ++  M++                      + +  L++L  G +T+S G  CA  AG+ S +VKRA H+++
Sbjct:  351 RETYLQLSCVVN-MESVETICCAGALISYISRAKITEGIPEDQPLDISEIEQFSLKRFLHINSDALCSLQIFEDESHPN-MHMRARSKEGLSLFGILNNTRTTSGKQLLKQWFLRPTLDLDIIDERHRTIECFLQTDNLENSEQLVSCLKNIKNIPKIIDNMK-GNLNIKDWQSLLQFAFYCLKIRNIVRELNH----SENI-----------QIFTKIKETFIVADLKDIGSYINVIDFDESVKENRIV-VKSHIDEELDHMKRTYDGLDDFLSEVAREISTTIPSEFALTLNVIYFPQLGYLITVPLKPEWKKEDDFKIDGLYYQFSTATTVYYKNDRMKELDEYLGDIHGLIVDREIEIMQKLQDHILEYASLLLNATAACAELDCLLSLAESARKFKYCRPHLVNENILEIVKGRHPLQELCVDIFVANDIKIAGGNGIITNENVDNDSATSSAY-------------------------KSIMLLSGANYSGKSVYLKQVALITYMAHIGSFVPADSATIGLTDKIFTRVQTRETVSKIQSAFMIDLQQISIALRNSTSRSLLIFDEFGKGTGSTDGAGLFCGVIEHLLKRGRDCPKVIAATHFHEIFE-NNLLPQALPISLA-TMEIM----------------RDDEKEELAFLYRLVPGRSTTSWGTFCAAFAGMPSHIVKRASHLSQ 984          
BLAST of NO13G01780 vs. NCBI_GenBank
Match: PKY53075.1 (hypothetical protein RhiirA4_547487 [Rhizophagus irregularis])

HSP 1 Score: 312.0 bits (798), Expect = 5.400e-81
Identity = 206/696 (29.60%), Postives = 354/696 (50.86%), Query Frame = 0
Query:   26 RRNYDRLSCVIDFLEEPLLVKALGALLIHLQGRVFSLEMAGRVP--VGRLRRFDLAGFVRLDNNALMSLQIFHEEKHPNVINGRGKAKEGFSLFSLLDQTRSRPGRKVLKEWMLRPLRCVEKIEERQMMVELLLQGEAMEVVNNAGRLLGRVGDVGRVLLRVKRAGATVNDWLTLANTAQHVLLLQNCLIVLGHVAIRQERVVEGGKEEGGAARVVRGVLERISGEAVRRVQEVVTCVVDLEITKESKVVAVRTGCDAELDRLRAEYDNLEEFLSGEARDVLAEQASRLLSTVSVQFLPQVGFLVIVQASEKVAVETDPR---FRFVFAEGESVYYKTPRMDVLDDSIGDLAAAIHDREATLLRAVGEEVLKEEVPLTEAVRACAEVDVLLSFAQVAGGLAWVKPMITEDKVVVVKDGRHPLQELAVEVFIPNDVFLVGKGGESSDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGLAVVTGPNFSGKSVYIKTVGVLTYLAHLGCFLPCQQALIGLVDGIYTRIASAETVTVQQSTFTIDCSQMNAVFRNATPSSLILVDEFGKGSAETDGLALLVACLSRLHILG---ARTLVTTHFLELFQRKGLLSPHLAYEISYRMDVFVPXXXXXXXXXXXXXXXXXXIQTVVPLFKLTKGVATSSDGFSCAVLAGLASPLVKRAEHVAR 714
            R  Y +LSCV++ +E    +   GAL+ ++     +  +    P  +  + +F L  F+ ++++AL SLQIF +E HPN ++ R ++KEG SLF +L+ TR+  G+++LK+W LRP   ++ I+ER   +E  LQ + +E        L  + ++ +++  +K     + DW +L   A + L ++N +  L H                 + ++   + E      ++ +   +  +   E  KE+++V V++  D ELD ++  YD L++FLS  AR++     S    T++V + PQ+G+L+ V    +   E D +     + F+   +VYYK  RM  LD+ +GD+   I DRE  +++ + + +L+    L  A  ACAE+D LLS A+ A    + +P +  + ++ +  GRHPLQEL V++F+ ND+ + G  G  ++                                      + + +++G N+SGKSVY+K V ++TY+AH+G F+P   A IGL D I+TR+ + ETV+  QS F ID  Q++   RN+T  SL++ DEFGKG+  TDG  L    +  L   G    + +  THF E+F+   LL   L   ++  M++                      + +  L++L  G +T+S G  CA  AG+ S +VKRA H+++
Sbjct:  351 RETYLQLSCVVN-MESVETICCAGALISYISRAKITEGIPEDQPLDISEIEQFSLKRFLHINSDALCSLQIFEDESHPN-MHMRARSKEGLSLFGILNNTRTTSGKQLLKQWFLRPTLDLDIIDERHRTIECFLQTDNLENSEQLVSCLKNIKNIPKIIDNMK-GNLNIKDWQSLLQFAFYCLKIRNIVRELNH---------------SESVQIFTKIKETFIVADLKDIGSYINVIDFDESVKENRIV-VKSHIDEELDHMKRTYDGLDDFLSEVAREISTTIPSEFALTLNVIYFPQLGYLITVPLKPEWKKEDDFKIDGLYYQFSTATTVYYKNDRMKELDEYLGDIHGLIVDREIEIMQKLQDHILEYASLLLNATAACAELDCLLSLAESARKFKYCRPHLVNENILEIVKGRHPLQELCVDIFVANDIKIAGGNGIITNENVDNDSATSSAY-------------------------KSIMLLSGANYSGKSVYLKQVALITYMAHIGSFVPADSATIGLTDKIFTRVQTRETVSKIQSAFMIDLQQISIALRNSTSRSLLIFDEFGKGTGSTDGAGLFCGVIEHLLKRGRDCPKVIAATHFHEIFE-NNLLPQALPISLA-TMEIM----------------RDDEKEELAFLYRLVPGRSTTSWGTFCAAFAGMPSHIVKRASHLSQ 984          
BLAST of NO13G01780 vs. NCBI_GenBank
Match: KZV85507.1 (hypothetical protein EXIGLDRAFT_255658 [Exidia glandulosa HHB12029])

HSP 1 Score: 311.6 bits (797), Expect = 7.000e-81
Identity = 225/703 (32.01%), Postives = 351/703 (49.93%), Query Frame = 0
Query:   31 RLSCVIDFLEEPLLVKALGALL--IHLQGRVFSLEMAGRVPVGRLRRFDLAGFVRLDNNALMSLQIFHEEKHPNVINGRGKAKEGFSLFSLLDQTRSRPGRKVLKEWMLRPLRCVEKIEERQMMVELLLQGEAMEVVNNAGRLLGRVGDVGRVLLRVKRAGATVNDWLTLANTAQHVLLLQNCLIVLGHVAIRQERVVEGGKEEGGAARVVRGVLERISGEAVRRVQEVVTCVVDLEITKESKVVAVRTGCDAELDRLRAEYDNLEEFLSGEARDVLAEQASRLLSTVSVQFLPQVGFLVIVQASE---KVAVETDPR-FRFVFAEGESVYYKTPRMDVLDDSIGDLAAAIHDREATLLRAVGEEVLKEEVPLTEAVRACAEVDVLLSFAQVAGGLAWVKPMITEDKVVVVKDGRHPLQELAVEVFIPNDVFLVGKGGESSDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGLAVVTGPNFSGKSVYIKTVGVLTYLAHLGCFLPCQQALIGLVDGIYTRIASAETVTVQQSTFTIDCSQMNAVFRNATPSSLILVDEFGKGSAETDGLALLVACLSRLHILGA---RTLVTTHFLELFQRKGLLSPHLAYEISYRMDVFVPXXXXXXXXXXXXXXXXXXIQTVVPLFKLTKGVATSSDGFSCAVLAGLASPLVKRAEHVARCLVEGTLSIHP 725
            R++  ++    PL +  + ALL  IH       L+      V  +    L  +++++ +AL+SLQIF E+ H ++ +   K KEG SLF  L+ T++R G  +L++W LRP   +E I ER   VE  L+ + + V       L  V +V  +L  ++R  A   DW TL   A H  +L + L  L H               G    +V+ + E +     + + E V   +D E +  ++ V VR   D ELD+ +  YD L+ F++  +  V  E ++ ++  ++V + PQ+GFL+ V   E   +   E  P  + + F   ESVY K+ +M  +D  IGD+   I +RE  ++ A+ E ++     +  A    AE+D LLSFAQ +    ++KPM+T + V+ V+ GRHPL E  V+ FIPND FLVG  G                                          R + V+TG N  GKSVY+K V +L ++A +GCF+P + A IGLVD I+TR+ + E+++  QS+F +D +Q++   RN+T  SLIL+DEFGKG+ +TDG  LLV  L  L   GA   R L TTHF ++F R  ++ P L   +++   + V                      +V L+K+  G++  S    CA + GL  P+V RA++V  C+V   LS+ P
Sbjct:   81 RIANFVEAERSPLCMACVNALLEQIHRTRAFGELDTDTHRIVNNIESLRLDQYMQINMDALLSLQIFEEQHHASMHS--DKTKEGLSLFGTLNYTKTRAGYDLLRQWFLRPSLSLETINERHTAVECFLRADNLSVCGALRTHLKGVRNVPHMLTAMQRGRAEARDWETLCKFAFHAAMLADSLEELAH---------------GDDVAIVQKLKECLDTADFKVMGEEVNSTIDWEASALNQRVCVRPLIDPELDQYKELYDGLDSFMNHVSAQVAMEVSADVVPALNVVYFPQIGFLICVPKPEGWRREEPELGPSDWTYSFHTEESVYLKSDKMHDVDHHIGDIQTMIAERELEIVHALYERIVPYAPAVGAACGVMAELDCLLSFAQASLIHGYIKPMMTNENVLAVRGGRHPLHEQVVDTFIPNDSFLVGGIG---------------IGVADGDEEEADNADDGGDDGILQQTERSVMVITGANACGKSVYLKQVALLQFMAQIGCFVPVESATIGLVDKIFTRVQARESISKIQSSFMLDLNQVSLALRNSTARSLILLDEFGKGTLDTDGAGLLVGVLRHLLGRGADCPRVLATTHFRDVF-RADIVPPSLPLLLAHMRVMLV---------------REEGADGIVYLYKVAPGLSLESHAAKCAAVCGLPKPVVDRAQYVT-CVV--ALSLFP 732          
BLAST of NO13G01780 vs. NCBI_GenBank
Match: EJK76509.1 (hypothetical protein THAOC_01722, partial [Thalassiosira oceanica])

HSP 1 Score: 311.2 bits (796), Expect = 9.200e-81
Identity = 257/802 (32.04%), Postives = 369/802 (46.01%), Query Frame = 0
Query:   28 NYDRLSCVIDFLEEPLLVKALGALLIHLQGRVFSLEMAGRVPVGRLRRFDLA-GFVRLDNNALMSLQIFHEEKHPNVINGRGK------AKEGFSLFSLLDQTRSRPGRKVLKEWMLRPLRCVEKIEERQMMVELLLQGEAMEVVNNAGRLLGRVGDVGRVLLRVKRAGATVNDWLTLANTAQHVLLLQNCLI------------VLGHVAIRQERVVEG--GKEEGGAARVVRGVLERISGEAVRRVQEVVTCVVDLEITKESK-VVAVRTGCDAELDRLRAEYDNLEEFLSGEARDVLAEQASRLLSTVSVQFLPQVGFLVIV---QASEKVAVETDPR----FRFVFAEGESVYYKTPRMDVLDDSIGDLAAAIHDREATLLRAVGEEVLKEEVPLTEAVRACAEVDVLLSFAQVAGGLAWVKPMITE--DKVVVVKDGRHPLQELAVEVFIPNDVFLVGKGGESSDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGLAVVTGPNFSGKSVYIKTVGVLTYLAHLGCFLPCQQALIGLVDGIYTRIASAETVTVQQSTFTIDCSQMNAVFRNATPSSLILVDEFGKGSAETDGLALLVACLSRLHILGARTLVTTHFLELFQRKGLLSPHLAYEISYRMDVFVPXXXXXXXXXXXXXXXXXXIQTVVPLFKLTKGVATSSDGFSCAVLAGLASPLVKRAEHVARCLVEGTLSIHPLPRPLSWRKEGXXXXXXXXXXXXXXXXXXXXXXXXXREVLRYNKEAQEVLRAFMAVEDWTECGEKETQQFVELL 799
            NY  L+ VIDF E P LV+ALGALL +L+   F LE    V +  +RR   +  F+RL+  +  +L+IF  + HP V N   K      +KEGFSL++LLD+T+S+ GR+ L++WM +PLR   KI +R   ++L L  E    V+     L  V  +  +L+R++R     ND+L L         + + L               G   +  +   EG   KE   +   +  +L R      R ++E +  V+D+EIT E+K  V +  G   ELDR +  ++ L+E LS   R VL ++   L+S      L  VGFL+ +   Q +   A  T P     F FVF +                        + D EA ++  + EE+L+ E  L     A +++D +LS A  A  L +VKP I    +  + +++GRHPLQEL V+ FIPND  +       SDR                                       + VVTGPNFSGKS Y + VGVL Y+ HLG FLPC  A I L D I    A  E+  V QSTF  D + +  + R ATP +L L+DEFGKG+A   G+A++V+ + +L     R +VTTHFLE+F   GLL        + +M VFVP                      VPLFKL  GVA+SS G   A LAGL   +V RA+ + + L  G   + PLP  L+                                   +    +  +R F+AV+ WT   ++E +   EL+
Sbjct:  207 NYHSLASVIDF-ESPTLVRALGALLTYLRQTAFRLEEGFTVTINNIRRCPASESFLRLEAASFRTLRIFATDHHPLVANNNVKGRSYNQSKEGFSLYTLLDRTKSKAGRERLRQWMTQPLRDAAKIRQRHTAIDLFLHPECHPAVSLVLERLSDVVSMDAILMRMQRCSTQPNDFLVLIRMLDAAYAIVSTLSGDLREKAYMLDREAGFNGMADDAGGEGELNKELYPSVAYIDDLLRRCHVPVTRDLREKMIAVIDVEITSETKDHVIINWGYHDELDRAKETFETLDETLSEVGRQVL-QKHQELIS------LKVVGFLISIDKRQHNHDEATNTFPSVPDDFEFVFTQ------------------------VKDTEAMVVSNLEEEILEVESELRSTFSALSDLDCILSLAGCAADLNFVKPEIAAEGEGAIQIENGRHPLQELIVD-FIPNDTQM------DSDRR--------------------------------------MLVVTGPNFSGKSCYARQVGVLVYMLHLGSFLPCDSARISLFDQILVGFADVESCAVPQSTFQRDLTAIAGIMRKATPKTLALIDEFGKGTAPASGIAVMVSAIQQLCKKKCRAVVTTHFLEMFS-LGLLEDGKGSVKAVQMSVFVPESED---------------DDAVPLFKLEDGVASSSAGLVVARLAGLNKKVVNRADGIIQALRSGR-QVKPLPESLNCNSP-------------------------------FQPGVKSAIRLFLAVDGWTGANDEEIELLDELV 883          
BLAST of NO13G01780 vs. NCBI_GenBank
Match: XP_008890468.1 (hypothetical protein PPTG_00750 [Phytophthora parasitica INRA-310] >ETI56632.1 hypothetical protein F443_00885 [Phytophthora parasitica P1569] >ETM02889.1 hypothetical protein L917_00784 [Phytophthora parasitica] >ETM56118.1 hypothetical protein L914_00814 [Phytophthora parasitica] >ETN24403.1 hypothetical protein PPTG_00750 [Phytophthora parasitica INRA-310] >ETO85378.1 hypothetical protein F444_00893 [Phytophthora parasitica P1976])

HSP 1 Score: 310.1 bits (793), Expect = 2.000e-80
Identity = 234/729 (32.10%), Postives = 352/729 (48.29%), Query Frame = 0
Query:   26 RRNYDRLSCVIDFLEEPLLVKALGALLIHL---------QGRVFSLEMAGRVPVGR------------LRRFDLAGFVRLDNNALMSLQIFHEEKHPNVINGRGKAKEGFSLFSLLDQTRSRPGRKVLKEWMLRPLRCVEKIEERQMMVELLLQGEAMEVVNNAGRLLGRVGDVGRVLLRVKRAGATVNDWLTLANTAQHVLLLQNCLIVLGHVAIRQERVVEGGKEEGGAARVVRGVLERISGE-AVRRVQEVVTCVVDLEITKESKVVAVRTGCDAELDRLRAEYDNLEEFLSGEARDVLAEQASRLLSTVSVQFLPQVGFLVIVQASEKVAVETDPRFRFVFAEGESV-YYKTPRMDVLDDSIGDLAAAIHDREATLLRAVGEEVLKEEVPLTEAVRACAEVDVLLSFAQVAGGLAWVKPMITEDKVVVVKDGRHPLQELAVEVFIPNDVFLVGKGGESSDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGLAVVTGPNFSGKSVYIKTVGVLTYLAHLGCFLPCQQALIGLVDGIYTRIASAETVTVQQSTFTIDCSQMNAVFRNATPSSLILVDEFGKGSAETDGLALLVACLS-----RLHILGARTLVTTHFLELFQRKGLLSPHLAYEISYRMD--------VFVPXXXXXXXXXXXXXXXXXXIQTVVPLFKLTKGVATSSDGFSCAVLAGLASPLVKRAEHVARCLVEG 719
            R  Y  L    +F E   L++A GALL++L         +   F   +   + +G             + +  L GF+ +D + L SLQIF+ E HP+++ G G+AKEGFSLF LL++T ++ G  +L+ WML PL     I ER   V      E  E+      LL    DV  +  R+KR  A+V DW     +    L  Q+              ++E   E   +   +  V  R+  E  V  V  ++  VVD E +++   V +R+G    LD  R  Y++L+  L+  A  V  ++A+ +LS+++VQ++PQVG+++  ++       T P F F F E ++  YYK      LD+SIGD+   I D +  LL  +   +L+ E  + E     + +D L+SFA  A    + +P+I+E   +     RHPLQEL VE +IPND+FL     +SSD                                        + VVTG N SGKSVY+K VG+L Y+A +G F+P ++A IGLV  ++TRI S E+ TV QS+FTIDC+QM  +  +    SL L+DEFGKG+AE DG+ALL + ++     RL     R ++TTHFLE+F R  LL P L    S R +                                +  PL++L  G+++ S+  +CA   G+   +V+RA+ V  C   G
Sbjct:  147 REAYTFLGSFFNF-ESTQLIRATGALLLYLATEKVRGVAERVKFIQYVTSNLQIGNQLDDSESLYFSTVEQVALDGFMYIDKSTLQSLQIFNHEAHPSLVKGSGRAKEGFSLFGLLNRTVTKSGGSMLRRWMLTPLVSNTHINERHNSVAFFTDTENDEL---RQLLLKHFRDVAGIFQRIKRRCASVGDWCRFITSIGSFLEAQS--------------LIEDASET--SISPLPSVFSRVKSERGVTHVSNLLGNVVDFEESQQESTVVIRSGISDTLDAARQRYEDLDNVLTEVAFQV--QEANPVLSSITVQYIPQVGYVICCESP-----TTLPDFVFQFQEDDTTFYYKDACCRDLDESIGDIYGYILDLQRELLEELTMALLEYEGSIHEMTWIMSNLDCLISFASCAKSFNFTRPLISEGSTLKATQARHPLQELLVERYIPNDIFL-----DSSD---------------------------------------SITVVTGHNGSGKSVYLKMVGLLQYMAQIGSFVPAEKAEIGLVTKVFTRIQSMESATVSQSSFTIDCNQMAWMLNHGDGRSLFLIDEFGKGTAELDGIALLSSIINYLATKRLTPGRPRVVMTTHFLEIF-RNDLLEPELIVNPSLRQNEGEQREGSPTTARVVCTVMASTDAPESYSATSSAAPLYELRHGISSHSNALTCAAKCGIPLTMVQRAQEVLECTKRG 803          
BLAST of NO13G01780 vs. NCBI_GenBank
Match: XP_008890471.1 (hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >ETI56634.1 hypothetical protein, variant 2 [Phytophthora parasitica P1569] >ETK96468.1 hypothetical protein L915_00826 [Phytophthora parasitica] >ETL49824.1 hypothetical protein L916_00816 [Phytophthora parasitica] >ETM02891.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETM56120.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETN24405.1 hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >ETO85380.1 hypothetical protein, variant 2 [Phytophthora parasitica P1976] >ETP26474.1 hypothetical protein F441_00861 [Phytophthora parasitica CJ01A1] >ETP54471.1 hypothetical protein F442_00839 [Phytophthora parasitica P10297])

HSP 1 Score: 310.1 bits (793), Expect = 2.000e-80
Identity = 234/729 (32.10%), Postives = 352/729 (48.29%), Query Frame = 0
Query:   26 RRNYDRLSCVIDFLEEPLLVKALGALLIHL---------QGRVFSLEMAGRVPVGR------------LRRFDLAGFVRLDNNALMSLQIFHEEKHPNVINGRGKAKEGFSLFSLLDQTRSRPGRKVLKEWMLRPLRCVEKIEERQMMVELLLQGEAMEVVNNAGRLLGRVGDVGRVLLRVKRAGATVNDWLTLANTAQHVLLLQNCLIVLGHVAIRQERVVEGGKEEGGAARVVRGVLERISGE-AVRRVQEVVTCVVDLEITKESKVVAVRTGCDAELDRLRAEYDNLEEFLSGEARDVLAEQASRLLSTVSVQFLPQVGFLVIVQASEKVAVETDPRFRFVFAEGESV-YYKTPRMDVLDDSIGDLAAAIHDREATLLRAVGEEVLKEEVPLTEAVRACAEVDVLLSFAQVAGGLAWVKPMITEDKVVVVKDGRHPLQELAVEVFIPNDVFLVGKGGESSDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGLAVVTGPNFSGKSVYIKTVGVLTYLAHLGCFLPCQQALIGLVDGIYTRIASAETVTVQQSTFTIDCSQMNAVFRNATPSSLILVDEFGKGSAETDGLALLVACLS-----RLHILGARTLVTTHFLELFQRKGLLSPHLAYEISYRMD--------VFVPXXXXXXXXXXXXXXXXXXIQTVVPLFKLTKGVATSSDGFSCAVLAGLASPLVKRAEHVARCLVEG 719
            R  Y  L    +F E   L++A GALL++L         +   F   +   + +G             + +  L GF+ +D + L SLQIF+ E HP+++ G G+AKEGFSLF LL++T ++ G  +L+ WML PL     I ER   V      E  E+      LL    DV  +  R+KR  A+V DW     +    L  Q+              ++E   E   +   +  V  R+  E  V  V  ++  VVD E +++   V +R+G    LD  R  Y++L+  L+  A  V  ++A+ +LS+++VQ++PQVG+++  ++       T P F F F E ++  YYK      LD+SIGD+   I D +  LL  +   +L+ E  + E     + +D L+SFA  A    + +P+I+E   +     RHPLQEL VE +IPND+FL     +SSD                                        + VVTG N SGKSVY+K VG+L Y+A +G F+P ++A IGLV  ++TRI S E+ TV QS+FTIDC+QM  +  +    SL L+DEFGKG+AE DG+ALL + ++     RL     R ++TTHFLE+F R  LL P L    S R +                                +  PL++L  G+++ S+  +CA   G+   +V+RA+ V  C   G
Sbjct:  119 REAYTFLGSFFNF-ESTQLIRATGALLLYLATEKVRGVAERVKFIQYVTSNLQIGNQLDDSESLYFSTVEQVALDGFMYIDKSTLQSLQIFNHEAHPSLVKGSGRAKEGFSLFGLLNRTVTKSGGSMLRRWMLTPLVSNTHINERHNSVAFFTDTENDEL---RQLLLKHFRDVAGIFQRIKRRCASVGDWCRFITSIGSFLEAQS--------------LIEDASET--SISPLPSVFSRVKSERGVTHVSNLLGNVVDFEESQQESTVVIRSGISDTLDAARQRYEDLDNVLTEVAFQV--QEANPVLSSITVQYIPQVGYVICCESP-----TTLPDFVFQFQEDDTTFYYKDACCRDLDESIGDIYGYILDLQRELLEELTMALLEYEGSIHEMTWIMSNLDCLISFASCAKSFNFTRPLISEGSTLKATQARHPLQELLVERYIPNDIFL-----DSSD---------------------------------------SITVVTGHNGSGKSVYLKMVGLLQYMAQIGSFVPAEKAEIGLVTKVFTRIQSMESATVSQSSFTIDCNQMAWMLNHGDGRSLFLIDEFGKGTAELDGIALLSSIINYLATKRLTPGRPRVVMTTHFLEIF-RNDLLEPELIVNPSLRQNEGEQREGSPTTARVVCTVMASTDAPESYSATSSAAPLYELRHGISSHSNALTCAAKCGIPLTMVQRAQEVLECTKRG 775          
BLAST of NO13G01780 vs. NCBI_GenBank
Match: KZV92588.1 (hypothetical protein EXIGLDRAFT_836379 [Exidia glandulosa HHB12029])

HSP 1 Score: 309.7 bits (792), Expect = 2.700e-80
Identity = 219/690 (31.74%), Postives = 343/690 (49.71%), Query Frame = 0
Query:   31 RLSCVIDFLEEPLLVKALGALL--IHLQGRVFSLEMAGRVPVGRLRRFDLAGFVRLDNNALMSLQIFHEEKHPNVINGRGKAKEGFSLFSLLDQTRSRPGRKVLKEWMLRPLRCVEKIEERQMMVELLLQGEAMEVVNNAGRLLGRVGDVGRVLLRVKRAGATVNDWLTLANTAQHVLLLQNCLIVLGHVAIRQERVVEGGKEEGGAARVVRGVLERISGEAVRRVQEVVTCVVDLEITKESKVVAVRTGCDAELDRLRAEYDNLEEFLSGEARDVLAEQASRLLSTVSVQFLPQVGFLVIVQASEKVAVET----DPRFRFVFAEGESVYYKTPRMDVLDDSIGDLAAAIHDREATLLRAVGEEVLKEEVPLTEAVRACAEVDVLLSFAQVAGGLAWVKPMITEDKVVVVKDGRHPLQELAVEVFIPNDVFLVGKGGESSDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGLAVVTGPNFSGKSVYIKTVGVLTYLAHLGCFLPCQQALIGLVDGIYTRIASAETVTVQQSTFTIDCSQMNAVFRNATPSSLILVDEFGKGSAETDGLALLVACLSRLHILGA---RTLVTTHFLELFQRKGLLSPHLAYEISYRMDVFVPXXXXXXXXXXXXXXXXXXIQTVVPLFKLTKGVATSSDGFSCAVLAGLASPLVKRAEHV 712
            R++  ++    PL +  + ALL  IH       L+      V  +    L  +++++ +AL+SLQIF E+ H ++ +   K KEG SLF  L+ T++R G  +L++W LRP   +E I ER   VE  L+ + + V       L  V +V  +L  ++R  A   DW TL   A H  +L + L  LGH               G    +V+ + E +     + + E V   +D E +  ++ V VR   D ELD+ +  YD L+ F++  +  V  E ++ ++  ++V + PQ+GFL+ V   E    E      P + + F   ESVY K+ +M  +D  IGD+   I +RE  ++ A+ E ++     +  A    AE+D LLSFAQ +    +++P +T + V+ V+ GRHPL E  V+ FIPND FLVG  G                                          R + V+TG N  GKSVY+K V +L ++A +GCF+P + A IGLVD I+TR+ + E+++  QS+F +D +Q++   RN+T  SLIL+DEFGKG+ +TDG  LLV  L  L   GA   R L TTHF ++F R  ++ P L   +++   + V                      +V L+K+  G++  S    CA + GL  P+V RA++V
Sbjct:  218 RIANFVEAERSPLCLACVNALLEQIHRTRAFGELDTDTHRIVNNIEILRLDQYMQINMDALLSLQIFEEQHHASMHS--DKTKEGLSLFGTLNYTKTRAGYDLLRQWFLRPSLSLETINERHTAVECFLRADNLSVCGALRTHLKGVRNVPHMLTAMQRGRAEARDWETLCKFAFHAAMLADSLEELGH---------------GDDVAIVQKLKECLDTADFKVMGEEVNSTIDWEASALNQRVCVRPLIDPELDQYKELYDGLDSFMNHVSAQVAMEVSADVVPALNVVYFPQIGFLICVPKPEGWRREEPELGPPDWTYSFHTEESVYLKSDKMHDVDHHIGDIQTMIAERELEIVHALYERIVPYAPAVGAACSVMAELDCLLSFAQASLIHGYIRPTMTNENVLAVRGGRHPLHEQVVDTFIPNDSFLVGGIG---------------IGVADGDEDEADNADDGGDDGILQQTERSVMVITGANACGKSVYLKQVALLQFMAQIGCFVPVESATIGLVDKIFTRVQARESISKIQSSFMLDLNQVSLALRNSTARSLILLDEFGKGTLDTDGAGLLVGVLRHLLGRGADCPRVLATTHFRDVF-RADIVPPSLPLLLAHMRVMLV---------------REEGADGIVYLYKVAPGLSLESHAAKCAAVCGLPKPVVDRAQYV 859          
BLAST of NO13G01780 vs. NCBI_GenBank
Match: EXX78176.1 (MutS family protein MSH5 [Rhizophagus irregularis DAOM 197198w])

HSP 1 Score: 308.9 bits (790), Expect = 4.600e-80
Identity = 208/704 (29.55%), Postives = 355/704 (50.43%), Query Frame = 0
Query:   26 RRNYDRLSCVIDFLEEPLLVKALGALLIHLQGRVFSLEMAGRVP--VGRLRRFDLAGFVRLDNNALMSLQIFHEEKHPNVINGRGKAKEGFSLFSLLDQTRSRPGRKVLKEWMLRPLRCVEKIEERQMMVELLLQGEAMEVVNNAGRLLGRVGDVGRVLLRVKRAGATVNDWLTLANTAQHVLLLQNCLIVLGH-------VAIRQERVVEGGKEEGGAARVVRGVLERISGEAVRRVQE-VVTCVVDLEITKESKVVAVRTGCDAELDRLRAEYDNLEEFLSGEARDVLAEQASRLLSTVSVQFLPQVGFLVIVQASEKVAVETDPR---FRFVFAEGESVYYKTPRMDVLDDSIGDLAAAIHDREATLLRAVGEEVLKEEVPLTEAVRACAEVDVLLSFAQVAGGLAWVKPMITEDKVVVVKDGRHPLQELAVEVFIPNDVFLVGKGGESSDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGLAVVTGPNFSGKSVYIKTVGVLTYLAHLGCFLPCQQALIGLVDGIYTRIASAETVTVQQSTFTIDCSQMNAVFRNATPSSLILVDEFGKGSAETDGLALLVACLSRLHILG---ARTLVTTHFLELFQRKGLLSPHLAYEISYRMDVFVPXXXXXXXXXXXXXXXXXXIQTVVPLFKLTKGVATSSDGFSCAVLAGLASPLVKRAEHVAR 714
            R  Y +LSCV++ +E    +   GAL+ ++     +  +    P  +  + +F L   + L   AL SLQIF +E HPN ++ R ++KEG SLF +L+ TR+  G+++LK+W LRP   ++ I+ER   +E  LQ + +E        L  + ++ +++  +K     + DW +L   A + L ++N +  L H         I++  +V   K+ G    VV  ++  +    +  + +      +D + + +   + V++  D ELD ++  YD L++FLS  AR++     S    T++V + PQ+G+L+ V    +   E D +     + F+   +VYYK  RM  LD+ +GD+   I DRE  +++ + + +L+    L  A  ACAE+D LLS A+ A    + +P +  + ++ +  GRHPLQEL V++F+ ND+ + G  G  ++                                      + + +++G N+SGKSVY+K V ++TY+AH+G F+P   A IGL D I+TR+ + ETV+  QS F ID  Q++   RN+T  SL++ DEFGKG+  TDG  L    +  L   G    + +  THF E+F+   LL   L   ++  M++                      + +  L++L  G +T+S G  CA  AG+ S +VKRA H+++
Sbjct:  351 RETYLQLSCVVN-MESVETICCAGALISYISRAKITEGIPEDQPLDISEIEQFSLYETIFLVAYALCSLQIFEDESHPN-MHMRARSKEGLSLFGILNNTRTTSGKQLLKQWFLRPTLDLDIIDERHRTIECFLQTDNLENSEQLVSCLKNIKNIPKIIDNMK-GNLNIKDWQSLLQFAFYCLKIRNIVRELNHSENIQIFTKIKETFIVADLKDIGSYINVVNSMIVCLKYCTLTEINKYTFVKKIDFDESVKENRIVVKSHIDEELDHMKRTYDGLDDFLSEVAREISTTIPSEFALTLNVIYFPQLGYLITVPLKPEWKKEDDFKIDGLYYQFSTATTVYYKNDRMKELDEYLGDIHGLIVDREIEIMQKLQDHILEYASLLLNATAACAELDCLLSLAESARKFKYCRPHLVNENILEIVKGRHPLQELCVDIFVANDIKIAGGNGIITNENVDNDSATSSAY-------------------------KSIMLLSGANYSGKSVYLKQVALITYMAHIGSFVPADSATIGLTDKIFTRVQTRETVSKIQSAFMIDLQQISIALRNSTSRSLLIFDEFGKGTGSTDGAGLFCGVIEHLLKRGRDCPKVIAATHFHEIFE-NNLLPQALPISLA-TMEIM----------------RDDEKEELAFLYRLVPGRSTTSWGTFCAAFAGMPSHIVKRASHLSQ 1008          
The following BLAST results are available for this feature:
BLAST of NO13G01780 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
GBC38566.15.400e-8129.74DNA mismatch repair protein Msh5 [Rhizophagus irre... [more]
PKC07226.15.400e-8129.74hypothetical protein RhiirA5_500820 [Rhizophagus i... [more]
PKK65384.15.400e-8129.74hypothetical protein RhiirC2_853642 [Rhizophagus i... [more]
PKY53075.15.400e-8129.60hypothetical protein RhiirA4_547487 [Rhizophagus i... [more]
KZV85507.17.000e-8132.01hypothetical protein EXIGLDRAFT_255658 [Exidia gla... [more]
EJK76509.19.200e-8132.04hypothetical protein THAOC_01722, partial [Thalass... [more]
XP_008890468.12.000e-8032.10hypothetical protein PPTG_00750 [Phytophthora para... [more]
XP_008890471.12.000e-8032.10hypothetical protein, variant 2 [Phytophthora para... [more]
KZV92588.12.700e-8031.74hypothetical protein EXIGLDRAFT_836379 [Exidia gla... [more]
EXX78176.14.600e-8029.55MutS family protein MSH5 [Rhizophagus irregularis ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL131nonsL131Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR069ngnoR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001722NSK001722Nannochloropsis salina (N. salina CCMP1776)gene


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|557781gene_6828Nannochloropsis oceanica (N. oceanica CCMP1779)gene
MSH5gene8596Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G01780.4NO13G01780.4Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO13G01780.3NO13G01780.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO13G01780.2NO13G01780.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO13G01780.1NO13G01780.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G01780.4NO13G01780.4-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO13G01780.3NO13G01780.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO13G01780.2NO13G01780.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO13G01780.1NO13G01780.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G01780 ID=NO13G01780|Name=NO13G01780|organism=Nannochloropsis oceanica|type=gene|length=4278bp
CTCGAGACTGTAGTGGTGGAGGATAAGGACGTGTGGTGTTAAGTTGATGC
CTTGATGGGCTCTGAAAACCTCCTGTCTCAAGCGAAGAGCACAAGAAGTG
CACTCTTTATTAATGCAAATCTCATCCACTGCCCTGCTTTGCGACATCAT
TTCACACAGCAACACTACCCTGCTTGTGTGCCCAGGCCTCATCAAGCGGC
TCTCGTCAACGTCCGTGAGCAACATCGCTGACTCCTCTCGCTGCAGCCCC
ACTACCTCCATCTTCCCTTCTCCTCTCTTTCTTCTACGTCCCACTCACTC
ACTCCTCACGCCACCAACACCCACGATACGCACAGCTTAGCATATAAATA
TAAATATATCAACGATATGACCATGCAACCGAAGAAGAAGGGGGCGTTGG
GACGAACATCAACGGCGAAAAGCAAGGAGGAACGGATGGGAGCGTACGGA
AATAAATACGAGGAGGAGGAGGAGGAGGAAAACGACGAGGAGGAGGACGA
GGAGGATAGGCAGGGCGGTGGCGCGCCTTGGTGTCGACAGAATCCTGCAG
TAGGAGGAAGAGGAGACGATGGCGTGCCCATGGCTGTAGCGCGCCAGGCC
AATAAACTTGGTTACGCGTGCTTTGACGAGGAACGGAGCACCATTTACGT
CAACGAGCTGCTGGgtgagtcatcgaaataaagaagcgcatggggaagcg
tgggagggggagaatatctaaggcgtacctggcccagtgtcacgtctcgc
gtcagacattcatctgcctcacctcgtccttccctatttatttccctctc
ctccacacagTGGGCTCCGACTTCCGGGAGACGGTCCAAGCCCTCAAGCT
GCACCTCGGCCCCACTTCCTTCCTCATCGATGCATACCTTCTCGCCGACG
AAGACTTTTGCAAGCTCCTGGGGTGCGCCATCTCGGAGGATCGCCCCCAA
TTTTACATTAAGGTGGCCAAGgcacgtacgcatcctcctcctcccatcgt
accctcccttcctacatttgcaatccttcctcactaaccctccctctcca
tccccatcagGCTCGCAACTGGGATTTGCGACGTGCCATCACTCAGCTGT
GCACCTGCTTGGAAGTCCGGGAGCTTGCTGAAGCCAGCCGAACGAAAGTT
GAAGATAGGGAAGACGGGCTGATGCTCCAAAACCTTATCTCTGGAAGCCG
GGGAGGAGGGCGAGAGGGCGGAGCAGGAGCTGGAGGGTTAGATCCACGAA
GGAATTACGACCGATTGAGTTGTGTGATCGACTTTCTGGAGGAGCCGCTT
TTGGTGAAGGCTTTGGGCGCCTTGCTGATTCATTTGCAGGGGCGTGTGTT
TTCGCTTGAGATGGCGGGAAGGGTGCCGGTGGGGAGGCTGAGGAGGTTCG
ACCTTGCGGGGTTTGTGAGGCTGGACAATAACGCCTTGATGAGCTTGCAG
ATTTTTCATGAGGAGAAACATCCGAATGTGATCAATGGGAGGGGGAAGGC
GAAGGAGGGGTTTTCGTTGTTTAGTTTGTTGGATCAGACGAGGAGCAGGC
CGGGGAGGAAGGTTTTGAAGGAGTGGATGTTGCGGCCTTTGCGTTGTGTG
GAAAAGATAGAGGAGAGGCAGATGATGGTTGAATTGTTGCTGCAAGGGGA
GGCGATGGAGGTGGTGAACAATGCGGGGCGGTTGCTCGGGAGGGTGGGGG
ATGTGGGCAGGGTGCTATTGAGGGTGAAGAGGGCTGGAGCCACGGTGAAC
GATTGGCTGACGCTCGCGAATACGGCTCAACATGTTTTGCTCCTACAAAA
CTGCCTAATCGTGCTTGGCCACGTGGCAATCCGGCAGGAAAGAGTGGTGG
AGGGGGGGAAGGAGGAGGGAGGGGCTGCCCGGGTGGTGCGGGGGGTCTTG
GAACGGATTTCGGGGGAGGCAGTGAGGAGGGTGCAAGAGGTGGTTACTTG
TGTCGTTGATCTGGAGATCACGAAGGAGAGTAAGGTGGTGGCGGTGAGGA
CCGGCTGTGATGCCGAGTTGGATCGGCTTAGGGCAGAGTACGACAATTTG
GAGGAGTTTTTGAGTGGGGAGGCACGAGATGTTTTGGCGGAGCAGGCGTC
GCGCTTGCTATCCACGGTGTCGGTGCAGTTTCTGCCTCAGgtaggccatg
ctctttttttcgcatttctttctactttgatcttgaatcgttttcaccgg
aaaccctttcttttcactccccctccctccctccctccctcttcctcacc
tccctccctccctcccctcccctagGTCGGCTTCCTGGTCATCGTGCAAG
CCAGTGAGAAAGTGGCCGTGGAGACCGACCCGCGCTTCCGTTTTGTCTTT
GCCGAGGGCGAGTCGGTGTACTACAAAACCCCGCGGATGGACGTGCTGGA
CGACAGCATCGGCGACTTGGCTGCGGCGATCCACGACCGAGAGGCGACGT
TGCTCCGAGCGGTGGGAGAAGAGgtaggtgagggagggagagagagaagg
agggagtgaggaaaggaggagagccgagatagatcatccagcctaaccat
ccctccccccctctctgccgtcttccccgcgcagGTGTTGAAAGAGGAAG
TCCCACTCACAGAGGCAGTGCGTGCCTGCGCAGAGGTCGATGTGCTCCTG
TCCTTCGCCCAGGTCGCGGGGGGATTGGCCTGGGTGAAGCCCATGATCAC
GGAGGACAAGGTGGTGGTCGTCAAAGATGGAAGGCACCCCTTGCAGgtag
ggaaggaaggagggcttgtcttctcccaaggggaggttggggtggtacca
ctcggagggtgacggagacgacgtggatgcagaaccttgagggtcatcga
cgacgtctgcgccccatgagggtacgcgtgccctccttctttaatttcct
tcctccagttatatcttctttcctacgtacttcttccttcctcctgcctc
cctccccgcagGAACTGGCCGTGGAAGTCTTCATCCCCAATGATGTCTTT
CTGGTCGGCAAGGGCGGGGAGTCATCCGACAGGCAGCAGCAGGAGGGAAG
GGGAAAAAGCGAAAAGGAGAAGGCGAATGAAGAGGGGGAGGAGGGTGAGC
AGCAGCAGCAGGAGAGGCGGCAGAAGCGGCGGCCGGAGGGAGGGCGAGGC
CTGGCAGTCGTGACCGGTCCCAACTTCTCGGGGAAGAGTGTGTATATTAA
GACGGTGGGCGTGCTGACTTACCTCGCCCACCTTGGGTGCTTCCTGCCGT
GCCAGCAAGCCTTGATTGGGCTGGTGGACGGGATCTACACCAGGATTGCG
AGTGCTGAGACGGTGACAGTGCAGCAAAGTACCTTTACCATAGATTGCAG
gtaggggctggagggagggagggagaggggagggagggagggagggttca
cacccagcaatagtcgactgggtttccgcaccttgtgggcccccacaccc
caccctcctcctcccctagTCAAATGAACGCTGTCTTTCGGAATGCCACC
CCCTCCTCCCTCATCCTAGgtacgtcacagcagaggcgcagaagagaggg
agggaaagggggcgagaggacgagagaaaagacaacgtattgttctcagc
ccatctccctcccatcctctctccctctttccacacccagTGGACGAATT
TGGCAAAGGGTCCGCCGAGACCGACGGCCTGGCTCTGCTGGTCGCCTGCC
TCTCCCGCCTGCATATCCTGGGTGCCCGCACGCTTGTCACGACGCATTTT
CTCGAGCTCTTTCAACGCAAGGGCCTCCTCTCCCCTCACCTCGCCTACGA
GATATCTTACCGCATGGACGTGTTTGTACCGCCCCCCGCTCCCTCCTCTA
ACCCTCCCTCTACGAGCAGCAGTGGAAGCAGCAGCATTCAGACAGTCGTC
CCTTTGTTCAAGCTGACGAAAGGCGTCGCTACTTCTTCTGACGGTTTTTC
GTGCGCAGTTCTAGCAGGGCTTGCCTCACCTTTGGTGAAACGAGCGGAGC
ACGTCGCGCGTTGTCTCGTGGAGGGTACTCTGTCGATTCATCCCCTTCCT
CGTCCTCTTTCGTGGAGGAAGGAGGGAGGGGGGGAGAAGGAGGAGGAAAA
GGAGGCGGAGGAGGCGGGAAAGGGGGAGGAGGAGGAGGGAGGGAAGGGGG
GGCGGGAGGTATTGCGGTATAATAAGGAGGCGCAAGAGGTGCTTAGAGCG
TTTATGGCGGTGGAGGACTGGACGGAGTGTGGGGAGAAAGAGACGCAACA
GTTTGTGGAGTTGCTTCAGAAAGTGTAG
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protein sequence of NO13G01780.4

>NO13G01780.4-protein ID=NO13G01780.4-protein|Name=NO13G01780.4|organism=Nannochloropsis oceanica|type=polypeptide|length=802bp
MLQNLISGSRGGGREGGAGAGGLDPRRNYDRLSCVIDFLEEPLLVKALGA
LLIHLQGRVFSLEMAGRVPVGRLRRFDLAGFVRLDNNALMSLQIFHEEKH
PNVINGRGKAKEGFSLFSLLDQTRSRPGRKVLKEWMLRPLRCVEKIEERQ
MMVELLLQGEAMEVVNNAGRLLGRVGDVGRVLLRVKRAGATVNDWLTLAN
TAQHVLLLQNCLIVLGHVAIRQERVVEGGKEEGGAARVVRGVLERISGEA
VRRVQEVVTCVVDLEITKESKVVAVRTGCDAELDRLRAEYDNLEEFLSGE
ARDVLAEQASRLLSTVSVQFLPQVGFLVIVQASEKVAVETDPRFRFVFAE
GESVYYKTPRMDVLDDSIGDLAAAIHDREATLLRAVGEEVLKEEVPLTEA
VRACAEVDVLLSFAQVAGGLAWVKPMITEDKVVVVKDGRHPLQELAVEVF
IPNDVFLVGKGGESSDRQQQEGRGKSEKEKANEEGEEGEQQQQERRQKRR
PEGGRGLAVVTGPNFSGKSVYIKTVGVLTYLAHLGCFLPCQQALIGLVDG
IYTRIASAETVTVQQSTFTIDCSQMNAVFRNATPSSLILVDEFGKGSAET
DGLALLVACLSRLHILGARTLVTTHFLELFQRKGLLSPHLAYEISYRMDV
FVPPPAPSSNPPSTSSSGSSSIQTVVPLFKLTKGVATSSDGFSCAVLAGL
ASPLVKRAEHVARCLVEGTLSIHPLPRPLSWRKEGGGEKEEEKEAEEAGK
GEEEEGGKGGREVLRYNKEAQEVLRAFMAVEDWTECGEKETQQFVELLQK
V*
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protein sequence of NO13G01780.3

>NO13G01780.3-protein ID=NO13G01780.3-protein|Name=NO13G01780.3|organism=Nannochloropsis oceanica|type=polypeptide|length=802bp
MLQNLISGSRGGGREGGAGAGGLDPRRNYDRLSCVIDFLEEPLLVKALGA
LLIHLQGRVFSLEMAGRVPVGRLRRFDLAGFVRLDNNALMSLQIFHEEKH
PNVINGRGKAKEGFSLFSLLDQTRSRPGRKVLKEWMLRPLRCVEKIEERQ
MMVELLLQGEAMEVVNNAGRLLGRVGDVGRVLLRVKRAGATVNDWLTLAN
TAQHVLLLQNCLIVLGHVAIRQERVVEGGKEEGGAARVVRGVLERISGEA
VRRVQEVVTCVVDLEITKESKVVAVRTGCDAELDRLRAEYDNLEEFLSGE
ARDVLAEQASRLLSTVSVQFLPQVGFLVIVQASEKVAVETDPRFRFVFAE
GESVYYKTPRMDVLDDSIGDLAAAIHDREATLLRAVGEEVLKEEVPLTEA
VRACAEVDVLLSFAQVAGGLAWVKPMITEDKVVVVKDGRHPLQELAVEVF
IPNDVFLVGKGGESSDRQQQEGRGKSEKEKANEEGEEGEQQQQERRQKRR
PEGGRGLAVVTGPNFSGKSVYIKTVGVLTYLAHLGCFLPCQQALIGLVDG
IYTRIASAETVTVQQSTFTIDCSQMNAVFRNATPSSLILVDEFGKGSAET
DGLALLVACLSRLHILGARTLVTTHFLELFQRKGLLSPHLAYEISYRMDV
FVPPPAPSSNPPSTSSSGSSSIQTVVPLFKLTKGVATSSDGFSCAVLAGL
ASPLVKRAEHVARCLVEGTLSIHPLPRPLSWRKEGGGEKEEEKEAEEAGK
GEEEEGGKGGREVLRYNKEAQEVLRAFMAVEDWTECGEKETQQFVELLQK
V*
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protein sequence of NO13G01780.2

>NO13G01780.2-protein ID=NO13G01780.2-protein|Name=NO13G01780.2|organism=Nannochloropsis oceanica|type=polypeptide|length=933bp
MGKRGRGRISKAYLAQCHVSRQTFICLTSSFPIYFPLLHTVGSDFRETVQ
ALKLHLGPTSFLIDAYLLADEDFCKLLGCAISEDRPQFYIKVAKARNWDL
RRAITQLCTCLEVRELAEASRTKVEDREDGLMLQNLISGSRGGGREGGAG
AGGLDPRRNYDRLSCVIDFLEEPLLVKALGALLIHLQGRVFSLEMAGRVP
VGRLRRFDLAGFVRLDNNALMSLQIFHEEKHPNVINGRGKAKEGFSLFSL
LDQTRSRPGRKVLKEWMLRPLRCVEKIEERQMMVELLLQGEAMEVVNNAG
RLLGRVGDVGRVLLRVKRAGATVNDWLTLANTAQHVLLLQNCLIVLGHVA
IRQERVVEGGKEEGGAARVVRGVLERISGEAVRRVQEVVTCVVDLEITKE
SKVVAVRTGCDAELDRLRAEYDNLEEFLSGEARDVLAEQASRLLSTVSVQ
FLPQVGFLVIVQASEKVAVETDPRFRFVFAEGESVYYKTPRMDVLDDSIG
DLAAAIHDREATLLRAVGEEVLKEEVPLTEAVRACAEVDVLLSFAQVAGG
LAWVKPMITEDKVVVVKDGRHPLQELAVEVFIPNDVFLVGKGGESSDRQQ
QEGRGKSEKEKANEEGEEGEQQQQERRQKRRPEGGRGLAVVTGPNFSGKS
VYIKTVGVLTYLAHLGCFLPCQQALIGLVDGIYTRIASAETVTVQQSTFT
IDCSQMNAVFRNATPSSLILVDEFGKGSAETDGLALLVACLSRLHILGAR
TLVTTHFLELFQRKGLLSPHLAYEISYRMDVFVPPPAPSSNPPSTSSSGS
SSIQTVVPLFKLTKGVATSSDGFSCAVLAGLASPLVKRAEHVARCLVEGT
LSIHPLPRPLSWRKEGGGEKEEEKEAEEAGKGEEEEGGKGGREVLRYNKE
AQEVLRAFMAVEDWTECGEKETQQFVELLQKV*
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protein sequence of NO13G01780.1

>NO13G01780.1-protein ID=NO13G01780.1-protein|Name=NO13G01780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=992bp
MTMQPKKKGALGRTSTAKSKEERMGAYGNKYEEEEEEENDEEEDEEDRQG
GGAPWCRQNPAVGGRGDDGVPMAVARQANKLGYACFDEERSTIYVNELLV
GSDFRETVQALKLHLGPTSFLIDAYLLADEDFCKLLGCAISEDRPQFYIK
VAKARNWDLRRAITQLCTCLEVRELAEASRTKVEDREDGLMLQNLISGSR
GGGREGGAGAGGLDPRRNYDRLSCVIDFLEEPLLVKALGALLIHLQGRVF
SLEMAGRVPVGRLRRFDLAGFVRLDNNALMSLQIFHEEKHPNVINGRGKA
KEGFSLFSLLDQTRSRPGRKVLKEWMLRPLRCVEKIEERQMMVELLLQGE
AMEVVNNAGRLLGRVGDVGRVLLRVKRAGATVNDWLTLANTAQHVLLLQN
CLIVLGHVAIRQERVVEGGKEEGGAARVVRGVLERISGEAVRRVQEVVTC
VVDLEITKESKVVAVRTGCDAELDRLRAEYDNLEEFLSGEARDVLAEQAS
RLLSTVSVQFLPQVGFLVIVQASEKVAVETDPRFRFVFAEGESVYYKTPR
MDVLDDSIGDLAAAIHDREATLLRAVGEEVLKEEVPLTEAVRACAEVDVL
LSFAQVAGGLAWVKPMITEDKVVVVKDGRHPLQELAVEVFIPNDVFLVGK
GGESSDRQQQEGRGKSEKEKANEEGEEGEQQQQERRQKRRPEGGRGLAVV
TGPNFSGKSVYIKTVGVLTYLAHLGCFLPCQQALIGLVDGIYTRIASAET
VTVQQSTFTIDCSQMNAVFRNATPSSLILVDEFGKGSAETDGLALLVACL
SRLHILGARTLVTTHFLELFQRKGLLSPHLAYEISYRMDVFVPPPAPSSN
PPSTSSSGSSSIQTVVPLFKLTKGVATSSDGFSCAVLAGLASPLVKRAEH
VARCLVEGTLSIHPLPRPLSWRKEGGGEKEEEKEAEEAGKGEEEEGGKGG
REVLRYNKEAQEVLRAFMAVEDWTECGEKETQQFVELLQKV*
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Synonyms
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