jgi.p|Nanoce1779_2|557781, gene_6828 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|557781
Unique Namegene_6828
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_17:202334..205643 +

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Properties
Property NameValue
TranscriptId557867
ProteinId557781
Product namemuts protein 5
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_17supercontigscaffold_17:202334..205643 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0032301MutSalpha complex
GO:0032302MutSbeta complex
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0030983mismatched DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006298mismatch repair
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL026ncniL026Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO13G01780NO13G01780Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|557781mRNA_6828-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|557781mRNA_6828Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|557781

>mRNA_6828-protein ID=mRNA_6828-protein|Name=jgi.p|Nanoce1779_2|557781|organism=Nannochloropsis oceanica|type=polypeptide|length=761bp
MLQNLISGSRGGGREGGAGAGGLDPRRNYDRLSCVIDFLEEPLLVKALGA
LLIHLQGRVFSLEMAGRVPVGRLRRFDLAGFVRLDNNALMSLQIFHEEKH
PNVINGRGKAKEGFSLFSLLDQTRSRPGRKVLKEWMLRPLRCVEKIEERQ
MMVELLLQGEAMEVVNNAGRLLGRVGDVGRVLLRVKRAGATVNDWLTLAN
TAQHVLLLQNCLIVLGHVAIRQERVVEGGKEEGGAARVVRGVLERISGEA
VRRVQEVVTCVVDLEITKESKVVAVRTGCDAELDRLRAEYDNLEEFLSGE
ARDVLAEQASRLLSTVSVQFLPQVGFLVIVQASEKVAVETDPRFRFVFAE
GESVYYKTPRMDVLDDSIGDLAAAIHDREATLLRAVGEEVLKEEVPLTEA
VRACAEVDVLLSFAQVAGGLAWVKPMITEDKVVVVKDGRHPLQELAVEVF
IPNDVFLRRPEGGRGLAVVTGPNFSGKSVYIKTVGVLTYLAHLGCFLPCQ
QALIGLVDGIYTRIASAETVTVQQSTFTIDCSQMNAVFRNATPSSLILVD
EFGKGSAETDGLALLVACLSRLHILGARTLVTTHFLELFQRKGLLSPHLA
YEISYRMDVFVPPPAPSSNPPSTSSSGSSSIQTVVPLFKLTKGVATSSDG
FSCAVLAGLASPLVKRAEHVARCLVEGTLSIHPLPRPLSWRKEGGGEKEE
EKEAEEAGKGEEEEGGKGGREVLRYNKEAQEVLRAFMAVEDWTECGEKET
QQFVELLQKV*
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Synonyms
Publications