NO13G01780, NO13G01780 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G01780 vs. NCBI_GenBank
Match: EWM21854.1 (mismatch repair protein 5 [Nannochloropsis gaditana]) HSP 1 Score: 950.7 bits (2456), Expect = 3.000e-273 Identity = 532/808 (65.84%), Postives = 610/808 (75.50%), Query Frame = 0 Query: 17 GAGAG---GLDPRRNYDRLSCVIDFLEEPLLVKALGALLIHLQGRVFSLEMAGRVPVGRLRRFDLAGFVRLDNNALMSLQIFHEEKHPNVINGRGKAKEGFSLFSLLDQTRSRPGRKVLKEWMLRPLRCVEKIEERQMMVELLLQGEAMEVVNNAGRLLGRVGDVGRVLLRVKRAGATVNDWLTLANTAQHVLLLQNCLIVLGHVAIRQERVVEGGKEEGG-------------AARVVRGVLERISGEAVRRVQEVVTCVVDLEITKESKVVAVRTGCDAELDRLRAEYDNLEEFLSGEARDVLAEQASRLLSTVSVQFLPQVGFLVIVQASEKVAVETDPRFRFVFAEGESVYYKTPRMDVLDDSIGDLAAAIHDREATLLRAVGEEVLKEEVPLTEAVRACAEVDVLLSFAQVAGGLAWVKPMITEDKVVVVKDGRHPLQELAVEVFIPNDVFLVGKGGESSDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGLAVVTGPNFSGKSVYIKTVGVLTYLAHLGCFLPCQQALIGLVDGIYTRIASAETVTVQQSTFTIDCSQMNAVFRNATPSSLILVDEFGKGSAETDGLALLVACLSRLHILGARTLVTTHFLELFQRKGLLSPHLAYEISYRMDVFVP-------XXXXXXXXXXXXXXXXXXIQTVVPLFKLTKGVATSSDGFSCAVLAGLASPLVKRAEHVARCLVEGTLSIHPLPRPLSWRKEGXXXXXXXXXXXXXXXXXXXXXXXXXREVLRYNKEAQEVLRAFMAVEDWTECGEKETQQFVELLQKV 802 G+G G GLDPRRNYDRLSCVIDF+ E LLVKALGALL+HLQ F LE+ GRV V L RFDL FV LD+NAL SLQIFHEEKHPNVI+GRGKAKEGFSLF+LLDQT S PGRK LKEWMLRPLR V I ERQ MVELLL EAMEVV NAG LLG+VGD+ R+L R++RAG+TVNDWLTLANTA+H+LLLQ+CL VL H+ R + G G A +++G L+RIS +AV RV E +T V+DLEIT+ESK +AVR GCD ELDRLR +YD LEEFLS EAR VLAEQ+S+LLS +SVQFLPQVGFLVIVQA+E++AVE DPRFRFVFAEG+++YYKTPRMDVLDDSIGDL+AAI DRE LLR + EE+LKEE L EAVRACAE+DVL++FAQ+AGGLAWV+PM+TE++VVVVKDGRHPLQEL VE FIPNDVFL+G G + R G RG+AVVTGPNFSGKSVYIK VGVL YLAHLGCFLPC+QALIG+VD I TRIASAETVTVQQS+FTIDCSQMNAVF+NA+PSSL+LVDEFGKGSAETDGLALLVACLSRL LGAR LVTTHFLELFQRKGLLSP LA +ISYRMD+FVP XXXXXXXXXXXXX I T+VPLFKLTKGVA+SSDGFSCA LAGLA L+KRAE +A+ VEG++ I PL RP+++R REVLR+N +AQE L F+ VEDW +++ Q F+ELL++V Sbjct: 160 GSGQGRDEGLDPRRNYDRLSCVIDFMSENLLVKALGALLVHLQCTTFQLEIGGRVTVQTLERFDLGSFVHLDSNALTSLQIFHEEKHPNVISGRGKAKEGFSLFALLDQTHSLPGRKCLKEWMLRPLRSVRGIRERQNMVELLLHPEAMEVVTNAGMLLGKVGDIQRILTRMRRAGSTVNDWLTLANTAEHILLLQSCLAVLAHLTARLSSASDKGPTTAGEEEHRTNEGSYSSAMAMLQGFLDRISRQAVGRVSEALTKVLDLEITRESKSMAVRLGCDEELDRLRGDYDGLEEFLSEEARGVLAEQSSQLLSKISVQFLPQVGFLVIVQANERIAVENDPRFRFVFAEGDALYYKTPRMDVLDDSIGDLSAAIQDREGLLLRQLAEEILKEETALAEAVRACAELDVLMAFAQLAGGLAWVRPMVTEERVVVVKDGRHPLQELTVETFIPNDVFLMGGDGNAVHR----------------DGGDEKHAQKQGLEHCNQHGTRGVAVVTGPNFSGKSVYIKMVGVLVYLAHLGCFLPCRQALIGVVDSIRTRIASAETVTVQQSSFTIDCSQMNAVFQNASPSSLVLVDEFGKGSAETDGLALLVACLSRLQRLGARALVTTHFLELFQRKGLLSPQLANDISYRMDIFVPPLPPXXXXXXXXXXXXXXXXPSAANIHTIVPLFKLTKGVASSSDGFSCAALAGLAPSLIKRAEQIAKYHVEGSMKIEPLARPIAFR---------------GGSENEKEEKNQGREVLRFNLQAQEALELFLGVEDWLLKKDQDLQGFIELLEQV 936
BLAST of NO13G01780 vs. NCBI_GenBank
Match: CBJ29342.1 (MutS protein homolog 5 [Ectocarpus siliculosus]) HSP 1 Score: 355.1 bits (910), Expect = 5.500e-94 Identity = 237/674 (35.16%), Postives = 357/674 (52.97%), Query Frame = 0 Query: 45 VKALGALLIHLQGRVFSLEMAGRVPVGRLRRFDLAGFVRLDNNALMSLQIFHEEKHPNVING-----RGKAKEGFSLFSLLDQTRSRPGRKVLKEWMLRPLRCVEKIEERQMMVELLLQGEAMEVVNNAGRLLGRVGDVGRVLLRVKRAGATVNDWLTLANTAQHVLLLQNCLIVLGHVAIRQERVVEGGKEEGGAARVVRGVLERISGEAVRRVQEVVTCVVDLEITKESKVVAVRTGCDAELDRLRAEYDNLEEFLSGEARDVLAEQASRLLSTVSVQFLPQVGFLVIVQASEKVAVETDPRFRFVFAEGESVYYKTPRMDVLDDSIGDLAAAIHDREATLLRAVGEEVLKEEVPLTEAVRACAEVDVLLSFAQVAGGLAWVKPMITEDKVVVVKDGRHPLQELAVEVFIPNDVFLVGKGGESSDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGLAVVTGPNFSGKSVYIKTVGVLTYLAHLGCFLPCQQALIGLVDGIYTRIASAETVTVQQSTFTIDCSQMNAVFRNATPSSLILVDEFGKGSAETDGLALLVACLSRLHILGARTLVTTHFLELFQRKGL-------LSPHLAYEISYRMDVFVP-------XXXXXXXXXXXXXXXXXXIQTVVPLFKLTKGVATSSDGFSCAVLAG 700 V+ALGALLIHLQ VF+LE +G V V +R+ D +G++R+D+ AL L P + +G + K +FS+ +T+S GR+ LKEWML+PL + I RQ VE+L+Q E E+ L + + R+++R+K+ T DW L + + L +++ L ++ A V GG+ G + +L+ I +R+ E + V+D + + K V +R G D ELD +R ++L + L + VL E + +L +SV+++PQ+GF + E+ F F FA+GE+VYYK+P M +DD IGD+ A I D++A ++R + + ++ EE L A AE+D L+ A VAG +V+P + ED V+++K+GRHPLQE+AV++FIPND F+ G +A++TG N SGKSVY+K VGV YLAH+G F+P ++A+IGL D I+TRIA+ ET ++ QS+FTID +Q+ + R +TP SL+L+DEFGKG+A DG+ L+ A L L G + L T HF E+F + L L +RMDV VP PLFKL G+ ++S G +CA +AG Sbjct: 20 VRALGALLIHLQSTVFALEASGSVGVTAVRQLDSSGYMRIDSMALRRLFRCSWGIRPLIPHGFEGAWESRRKSSILMFSVA-RTKSASGRRCLKEWMLKPLHDIAAISVRQDGVEVLMQAENAEICRRLRSQLSKSYGMTRIIMRIKKVAWTFADWCKLITSIESALDVRDGLALMRTSA--GAAVTVGGR--FGNESFLARLLDDIDPVVLRKCLEGLCTVIDPVASAQDKDVVIRPGFDEELDNMRERLEDLPDILQQIGQIVLNENS--VLEELSVEYVPQIGFFTTLH--ERFGDLAPDDFTFAFAQGETVYYKSPTMRDVDDRIGDIQALITDKQAKIMRELEDALIAEEGALHAAASVLAELDAALALASVAGDFGFVRPEVVEDNVIMIKNGRHPLQEMAVDLFIPNDTFIA--------------------------------------------DGSRVALITGANCSGKSVYLKQVGVAVYLAHVGSFVPAEKAVIGLTDRIFTRIATVETSSLPQSSFTIDVNQVAQMARTSTPRSLLLIDEFGKGTAPADGIGLVAALLRHLSRKGRKCLFTLHFHEIFSHDLVKVSGPDELHTDLKDVSVFRMDVHVPSPPKAPESQGDGLGEGEGTTGEEWAFVPPTPLFKLKPGMTSNSHGIACAQVAG 640
BLAST of NO13G01780 vs. NCBI_GenBank
Match: GAX27643.1 (DNA mismatch repair protein MSH5 [Fistulifera solaris]) HSP 1 Score: 318.2 bits (814), Expect = 7.500e-83 Identity = 231/728 (31.73%), Postives = 368/728 (50.55%), Query Frame = 0 Query: 28 NYDRLSCVIDFLEEPLLVKALGALLIHLQGRVFSLEMAGRVPVGRLRRFDLAGFVRLDNNALMSLQIFHEEKHP-NVINGRGKAKEGFSLFSLLDQTRSRPGRKVLKEWMLRPLRCVEKIEERQMMVELLLQGEAMEVVNNAGRLLGRVGDVGRVLLRVKRAGATVNDWL----TLANTAQHVLLLQNCLIVLGHVAIRQERVVEGGKEEGGAA--------RVVRGVLERISGEAVRRVQEVVTCVVDLEITKESKVVAVRTGCDAELDRLRAEYDNLEEFLSGEARDVLAEQASRLLSTVSVQFLPQVGFLVIVQASEKVAVETDPRFRFVFAEGESVYYKTPRMDVLDDSIGDLAAAIHDREATLLRAVGEEVLKEEVPLTEAVRACAEVDVLLSFAQVAGGLAWVKPMI--TEDKVVVVKDGRHPLQELAV-EVFIPNDVFLVGKGGESSDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGLAVVTGPNFSGKSVYIKTVGVLTYLAHLGCFLPCQQALIGLVDGIYTRIASAETVTVQQSTFTIDCSQMNAVFRNATPSSLILVDEFGK----------------------GSAETDGLALLVACLSRLHILGARTLVTTHFLELFQRKGLLSPHLAYEISYRMDVFVPXXXXXXXXXXXXXXXXXXIQTVVPLFKLTKGVATSSDGFSCAVLAGLASPLVKRAEHVARCLVE 718 NY L+ ++DF + + V+ALG LL L+ + F G V V + + + ++ + + L +L IF E HP NG G AKEG SL++ L++T+S+PGR+ L+E ML+PL V+ I RQ VE LQ + +VV L VG V ++L R+ + + ND L TLA + + LQN VL + + E++ E A V+ +L+R + + + ++++ ++D E T + VA+R+G AELD+ + +YD+L + LS + + +Q L ++ V F+PQVGFL+ ++ F+FVF E Y++ LD++IGDL + I D EA ++ + E + + L A AE+D +L+FA A +V+P++ +E+ +++++GRHPLQE+ + + F+PND ++ +SD + +VTGPNFSGKS Y + +G++TY+AH+GCF+PC A I +VD IY R + ET V QS+F +D +QM + R A+P+SL+++DEFGK G++ G+ALL + L L G + + TTHFLELF GL+ + RM V +P + PLF+L GVA+SS G CA +AG+ ++ RA + E Sbjct: 170 NYHALASLVDF-DSTVQVQALGCLLSFLETKCFG-NQGGIVVVDDIVHCEASHYMAMSPDTLAALNIFAIEHHPLAASNGYGNAKEGQSLYAFLNRTKSKPGRQRLREIMLKPLLDVDAITMRQDGVEFFLQDDTQKVVPTLIHQLRNVGAVDKILNRIHKCCSQSNDILVFTKTLAASIAIISALQN--EVLLKLEYQLEQMSRPNAEVEWAIDPMSKRYYDFVQNLLQRCHVDILEDLLDLISSMIDEETTSTTGTVAIRSGYSAELDQWKVQYDSLRDTLSVYSDQM--KQGWPRLRSLMVLFMPQVGFLIGLENDGSWNNSLPEDFQFVFTEVGCSYFRNQDTRHLDEAIGDLDSQIKDTEALIVSELEEHIFTCDKELRSTFNALAELDCILAFAACAADQKYVRPILLPSEENCIIIQNGRHPLQEILIDDTFVPNDAYI------NSDHR--------------------------------------VNIVTGPNFSGKSCYARQIGIITYMAHIGCFVPCDNAQISIVDHIYARFSGTETCAVPQSSFQLDLTQMGTILRRASPNSLVIIDEFGKGEFDEGHALLFYPKIHSNDSSTGTSPASGVALLASALGHLAERGCKVVCTTHFLELFS-MGLIPEADHGFRALRMTVHLPENDK---------------EQATPLFRLEVGVASSSAGIVCAEMAGVKPAVIDRAREFVQATRE 831
BLAST of NO13G01780 vs. NCBI_GenBank
Match: XP_008890474.1 (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETI56633.1 hypothetical protein, variant 1 [Phytophthora parasitica P1569] >ETM02890.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETM56119.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETN24404.1 hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETO85379.1 hypothetical protein, variant 1 [Phytophthora parasitica P1976]) HSP 1 Score: 316.6 bits (810), Expect = 2.200e-82 Identity = 233/710 (32.82%), Postives = 350/710 (49.30%), Query Frame = 0 Query: 26 RRNYDRLSCVIDFLEEPLLVKALGALLIHLQGRVF--SLEMAGRVPVGRLRRFDLAGFVRLDNNALMSLQIFHEEKHPNVINGRGKAKEGFSLFSLLDQTRSRPGRKVLKEWMLRPLRCVEKIEERQMMVELLLQGEAMEVVNNAGRLLGRVGDVGRVLLRVKRAGATVNDWLTLANTAQHVLLLQNCLIVLGHVAIRQERVVEGGKEEGGAARVVRGVLERISGE-AVRRVQEVVTCVVDLEITKESKVVAVRTGCDAELDRLRAEYDNLEEFLSGEARDVLAEQASRLLSTVSVQFLPQVGFLVIVQASEKVAVETDPRFRFVFAEGESV-YYKTPRMDVLDDSIGDLAAAIHDREATLLRAVGEEVLKEEVPLTEAVRACAEVDVLLSFAQVAGGLAWVKPMITEDKVVVVKDGRHPLQELAVEVFIPNDVFLVGKGGESSDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGLAVVTGPNFSGKSVYIKTVGVLTYLAHLGCFLPCQQALIGLVDGIYTRIASAETVTVQQSTFTIDCSQMNAVFRNATPSSLILVDEFGKGSAETDGLALLVACLS-----RLHILGARTLVTTHFLELFQRKGLLSPHLAYEISYRMD--------VFVPXXXXXXXXXXXXXXXXXXIQTVVPLFKLTKGVATSSDGFSCAVLAGLASPLVKRAEHVARCLVEG 719 R Y L +F E L++A GALL++L L+ + + + + L GF+ +D + L SLQIF+ E HP+++ G G+AKEGFSLF LL++T ++ G +L+ WML PL I ER V E E+ LL DV + R+KR A+V DW + L Q+ ++E E + + V R+ E V V ++ VVD E +++ V +R+G LD R Y++L+ L+ A V ++A+ +LS+++VQ++PQVG+++ ++ T P F F F E ++ YYK LD+SIGD+ I D + LL + +L+ E + E + +D L+SFA A + +P+I+E + RHPLQEL VE +IPND+FL +SSD + VVTG N SGKSVY+K VG+L Y+A +G F+P ++A IGLV ++TRI S E+ TV QS+FTIDC+QM + + SL L+DEFGKG+AE DG+ALL + ++ RL R ++TTHFLE+F R LL P L S R + + PL++L G+++ S+ +CA G+ +V+RA+ V C G Sbjct: 147 REAYTFLGSFFNF-ESTQLIRATGALLLYLATEKIGNQLDDSESLYFSTVEQVALDGFMYIDKSTLQSLQIFNHEAHPSLVKGSGRAKEGFSLFGLLNRTVTKSGGSMLRRWMLTPLVSNTHINERHNSVAFFTDTENDEL---RQLLLKHFRDVAGIFQRIKRRCASVGDWCRFITSIGSFLEAQS--------------LIEDASET--SISPLPSVFSRVKSERGVTHVSNLLGNVVDFEESQQESTVVIRSGISDTLDAARQRYEDLDNVLTEVAFQV--QEANPVLSSITVQYIPQVGYVICCESP-----TTLPDFVFQFQEDDTTFYYKDACCRDLDESIGDIYGYILDLQRELLEELTMALLEYEGSIHEMTWIMSNLDCLISFASCAKSFNFTRPLISEGSTLKATQARHPLQELLVERYIPNDIFL-----DSSD---------------------------------------SITVVTGHNGSGKSVYLKMVGLLQYMAQIGSFVPAEKAEIGLVTKVFTRIQSMESATVSQSSFTIDCNQMAWMLNHGDGRSLFLIDEFGKGTAELDGIALLSSIINYLATKRLTPGRPRVVMTTHFLEIF-RNDLLEPELIVNPSLRQNEGEQREGSPTTARVVCTVMASTDAPESYSATSSAAPLYELRHGISSHSNALTCAAKCGIPLTMVQRAQEVLECTKRG 784
BLAST of NO13G01780 vs. NCBI_GenBank
Match: XP_008890472.1 (hypothetical protein, variant 3 [Phytophthora parasitica INRA-310] >ETI56635.1 hypothetical protein, variant 3 [Phytophthora parasitica P1569] >ETK96469.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL49825.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETM02892.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETM56121.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETN24406.1 hypothetical protein, variant 3 [Phytophthora parasitica INRA-310] >ETO85381.1 hypothetical protein, variant 3 [Phytophthora parasitica P1976] >ETP26475.1 hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1] >ETP54472.1 hypothetical protein, variant 1 [Phytophthora parasitica P10297]) HSP 1 Score: 316.6 bits (810), Expect = 2.200e-82 Identity = 233/710 (32.82%), Postives = 350/710 (49.30%), Query Frame = 0 Query: 26 RRNYDRLSCVIDFLEEPLLVKALGALLIHLQGRVF--SLEMAGRVPVGRLRRFDLAGFVRLDNNALMSLQIFHEEKHPNVINGRGKAKEGFSLFSLLDQTRSRPGRKVLKEWMLRPLRCVEKIEERQMMVELLLQGEAMEVVNNAGRLLGRVGDVGRVLLRVKRAGATVNDWLTLANTAQHVLLLQNCLIVLGHVAIRQERVVEGGKEEGGAARVVRGVLERISGE-AVRRVQEVVTCVVDLEITKESKVVAVRTGCDAELDRLRAEYDNLEEFLSGEARDVLAEQASRLLSTVSVQFLPQVGFLVIVQASEKVAVETDPRFRFVFAEGESV-YYKTPRMDVLDDSIGDLAAAIHDREATLLRAVGEEVLKEEVPLTEAVRACAEVDVLLSFAQVAGGLAWVKPMITEDKVVVVKDGRHPLQELAVEVFIPNDVFLVGKGGESSDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGLAVVTGPNFSGKSVYIKTVGVLTYLAHLGCFLPCQQALIGLVDGIYTRIASAETVTVQQSTFTIDCSQMNAVFRNATPSSLILVDEFGKGSAETDGLALLVACLS-----RLHILGARTLVTTHFLELFQRKGLLSPHLAYEISYRMD--------VFVPXXXXXXXXXXXXXXXXXXIQTVVPLFKLTKGVATSSDGFSCAVLAGLASPLVKRAEHVARCLVEG 719 R Y L +F E L++A GALL++L L+ + + + + L GF+ +D + L SLQIF+ E HP+++ G G+AKEGFSLF LL++T ++ G +L+ WML PL I ER V E E+ LL DV + R+KR A+V DW + L Q+ ++E E + + V R+ E V V ++ VVD E +++ V +R+G LD R Y++L+ L+ A V ++A+ +LS+++VQ++PQVG+++ ++ T P F F F E ++ YYK LD+SIGD+ I D + LL + +L+ E + E + +D L+SFA A + +P+I+E + RHPLQEL VE +IPND+FL +SSD + VVTG N SGKSVY+K VG+L Y+A +G F+P ++A IGLV ++TRI S E+ TV QS+FTIDC+QM + + SL L+DEFGKG+AE DG+ALL + ++ RL R ++TTHFLE+F R LL P L S R + + PL++L G+++ S+ +CA G+ +V+RA+ V C G Sbjct: 119 REAYTFLGSFFNF-ESTQLIRATGALLLYLATEKIGNQLDDSESLYFSTVEQVALDGFMYIDKSTLQSLQIFNHEAHPSLVKGSGRAKEGFSLFGLLNRTVTKSGGSMLRRWMLTPLVSNTHINERHNSVAFFTDTENDEL---RQLLLKHFRDVAGIFQRIKRRCASVGDWCRFITSIGSFLEAQS--------------LIEDASET--SISPLPSVFSRVKSERGVTHVSNLLGNVVDFEESQQESTVVIRSGISDTLDAARQRYEDLDNVLTEVAFQV--QEANPVLSSITVQYIPQVGYVICCESP-----TTLPDFVFQFQEDDTTFYYKDACCRDLDESIGDIYGYILDLQRELLEELTMALLEYEGSIHEMTWIMSNLDCLISFASCAKSFNFTRPLISEGSTLKATQARHPLQELLVERYIPNDIFL-----DSSD---------------------------------------SITVVTGHNGSGKSVYLKMVGLLQYMAQIGSFVPAEKAEIGLVTKVFTRIQSMESATVSQSSFTIDCNQMAWMLNHGDGRSLFLIDEFGKGTAELDGIALLSSIINYLATKRLTPGRPRVVMTTHFLEIF-RNDLLEPELIVNPSLRQNEGEQREGSPTTARVVCTVMASTDAPESYSATSSAAPLYELRHGISSHSNALTCAAKCGIPLTMVQRAQEVLECTKRG 756
BLAST of NO13G01780 vs. NCBI_GenBank
Match: POG63932.1 (MutS family protein MSH5 [Rhizophagus irregularis DAOM 181602=DAOM 197198]) HSP 1 Score: 315.8 bits (808), Expect = 3.700e-82 Identity = 208/704 (29.55%), Postives = 359/704 (50.99%), Query Frame = 0 Query: 26 RRNYDRLSCVIDFLEEPLLVKALGALLIHLQGRVFSLEMAGRVP--VGRLRRFDLAGFVRLDNNALMSLQIFHEEKHPNVINGRGKAKEGFSLFSLLDQTRSRPGRKVLKEWMLRPLRCVEKIEERQMMVELLLQGEAMEVVNNAGRLLGRVGDVGRVLLRVKRAGATVNDWLTLANTAQHVLLLQNCLIVLGH-------VAIRQERVVEGGKEEGGAARVVRGVLERISGEAVRRVQE-VVTCVVDLEITKESKVVAVRTGCDAELDRLRAEYDNLEEFLSGEARDVLAEQASRLLSTVSVQFLPQVGFLVIVQASEKVAVETDPR---FRFVFAEGESVYYKTPRMDVLDDSIGDLAAAIHDREATLLRAVGEEVLKEEVPLTEAVRACAEVDVLLSFAQVAGGLAWVKPMITEDKVVVVKDGRHPLQELAVEVFIPNDVFLVGKGGESSDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGLAVVTGPNFSGKSVYIKTVGVLTYLAHLGCFLPCQQALIGLVDGIYTRIASAETVTVQQSTFTIDCSQMNAVFRNATPSSLILVDEFGKGSAETDGLALLVACLSRLHILG---ARTLVTTHFLELFQRKGLLSPHLAYEISYRMDVFVPXXXXXXXXXXXXXXXXXXIQTVVPLFKLTKGVATSSDGFSCAVLAGLASPLVKRAEHVAR 714 R Y +LSCV++ +E + GAL+ ++ + + P + + +F L F+ ++++AL SLQIF +E HPN ++ R ++KEG SLF +L+ TR+ G+++LK+W LRP ++ I+ER +E LQ + +E L + ++ +++ +K + DW +L A + L ++N + L H I++ +V K+ G VV ++ + + + + +D + + + + V++ D ELD ++ YD L++FLS AR++ S T++V + PQ+G+L+ V + E D + + F+ +VYYK RM LD+ +GD+ I DRE +++ + + +L+ L A ACAE+D LLS A+ A + +P + + ++ + GRHPLQEL V++F+ ND+ + G G ++ + + +++G N+SGKSVY+K V ++TY+AH+G F+P A IGL D I+TR+ + ETV+ QS F ID Q++ RN+T SL++ DEFGKG+ TDG L + L G + + THF E+F+ LL L ++ M++ + + L++L G +T+S G CA AG+ S +VKRA H+++ Sbjct: 351 RETYLQLSCVVN-MESVETICCAGALISYISRAKITEGIPEDQPLDISEIEQFSLKRFLHINSDALCSLQIFEDESHPN-MHMRARSKEGLSLFGILNNTRTTSGKQLLKQWFLRPTLDLDIIDERHRTIECFLQTDNLENSEQLVSCLKNIKNIPKIIDNMK-GNLNIKDWQSLLQFAFYCLKIRNIVRELNHSENIQIFTKIKETFIVADLKDIGSYINVVNSMIVCLKYCTLTEINKYTFVKKIDFDESVKENRIVVKSHIDEELDHMKRTYDGLDDFLSEVAREISTTIPSEFALTLNVIYFPQLGYLITVPLKPEWKKEDDFKIDGLYYQFSTATTVYYKNDRMKELDEYLGDIHGLIVDREIEIMQKLQDHILEYASLLLNATAACAELDCLLSLAESARKFKYCRPHLVNENILEIVKGRHPLQELCVDIFVANDIKIAGGNGIITNENVDNDSATSSAY-------------------------KSIMLLSGANYSGKSVYLKQVALITYMAHIGSFVPADSATIGLTDKIFTRVQTRETVSKIQSAFMIDLQQISIALRNSTSRSLLIFDEFGKGTGSTDGAGLFCGVIEHLLKRGRDCPKVIAATHFHEIFE-NNLLPQALPISLA-TMEIM----------------RDDEKEELAFLYRLVPGRSTTSWGTFCAAFAGMPSHIVKRASHLSQ 1008
BLAST of NO13G01780 vs. NCBI_GenBank
Match: XP_008605649.1 (hypothetical protein SDRG_01874 [Saprolegnia diclina VS20] >EQC40805.1 hypothetical protein SDRG_01874 [Saprolegnia diclina VS20]) HSP 1 Score: 313.9 bits (803), Expect = 1.400e-81 Identity = 226/693 (32.61%), Postives = 352/693 (50.79%), Query Frame = 0 Query: 44 LVKALGALLIHLQGR--VFSLEMAGRVPVGRLRRFDLAGFVRLDNNALMSLQIFHEEKHPNVINGRGKAKEGFSLFSLLDQTRSRPGRKVLKEWMLRPLRCVEKIEERQMMVELLLQGEAMEVVNNAGRLLGRVGDVGRVLLRVKRAGATVNDWLTLANTAQHVLLLQNCLIVLGHVAIRQERVVEGGKEEGGAARVVRGVLERISG-EAVRRVQEVVTCVVDLEITKESKVVAVRTGCDAELDRLRAEYDNLEEFLSGEARDVLAEQASRLLSTVSVQFLPQVGFLVIVQASEKVAVETDPR-FRFVFAEGESVYYKTPRMDVLDDSIGDLAAAIHDREATLLRAVGEEVLKEEVPLTEAVRACAEVDVLLSFAQVAGGLAWVKPMITEDKVVVVKDGRHPLQELAVEVFIPNDVFLVGKGGESSDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGLAVVTGPNFSGKSVYIKTVGVLTYLAHLGCFLPCQQALIGLVDGIYTRIASAETVTVQQSTFTIDCSQMNAVFRNATPSSLILVDEFGKGSAETDGLALLVACLSRLH--IL---GARTLVTTHFLELFQRKGLLSPHLAYEISYRMDVFVPXXXXXXXXXXXXXXXXXXIQTVVP-------------LFKLTKGVATSSDGFSCAVLAGLASPLVKRAEHVARC 715 +++A+GALLI L V LE + + + + L G + +D AL SLQIF+EE HP+ + K+KEGFS+FSLLD T ++ G+ +L++WML+PL ++ IE RQ ++ L ++VN+ L DV R LL +K+ ++V DW + + L ++ + L + R +LERI+ E++ +V ++ V+D E +K+ +R G ELD+ R ++ ++ L + +VLA A + ++VQ++P++G+ + S +V PR F F F +G +YK R LD+S GD+ I D + LL + +E+++ EV + + +E+D LS A+ A + +P++ ED V K RHPLQEL VE +IPNDV L G + V+TG N SGKSVY+K VGVL Y+A LG F+P +A IG+V ++TRI S ETV + S+FTIDC+Q+ + R+ SL+L+DEFGKG++ DG+ LL A L L +L G + L+TTHFLE+FQ P+L + +R +V + + VP LF++ G+ATSS+ F CA +AG+ ++ RA + C Sbjct: 211 MIRAVGALLIFLSAENIVNQLETTTTISILAVEKASLDGVMLIDAIALKSLQIFNEEYHPSQLRAWEKSKEGFSIFSLLDHTMTKCGKAMLRQWMLKPLTDIDAIEARQDAIQFFLASSRNDLVNSLLVKLKAFKDVARSLLHMKQMRSSVQDWTVFYQSLNNFLGMRKEVTKLPRDILDSIR-----------------LLERIASLESLEQVSNMLGNVIDFEASKDEAYCVIREGISEELDQAREKFGEIDNVLL-DMSNVLA-NAYPEMRGIAVQYIPRIGYAICCPQSCQV-----PRSFEFQFEDGLQRFYKDVRCCKLDESYGDIHGQILDLQQGLLLELYDELMEHEVTFYDMIDVASELDCFLSLARAAREFNFTRPVMCEDITFVAKTARHPLQELTVESYIPNDVSLDTATGL-------------------------------------------IHVLTGENGSGKSVYLKMVGVLQYMAQLGSFIPVSEARIGIVTKLFTRIQSFETVLLSHSSFTIDCNQIATMLRHCDERSLLLIDEFGKGTSAIDGVCLLAAVLKDLKDTVLRHGGPKILMTTHFLEIFQ-----EPYLRDHLEFR-EVHQIECKDQARIIEETSTIACFVMSSVPINVASKGNVPTAALFEVVPGIATSSNAFRCATVAGVNERVLTRAHDILDC 830
BLAST of NO13G01780 vs. NCBI_GenBank
Match: XP_008605650.1 (hypothetical protein, variant [Saprolegnia diclina VS20] >EQC40806.1 hypothetical protein, variant [Saprolegnia diclina VS20]) HSP 1 Score: 313.9 bits (803), Expect = 1.400e-81 Identity = 226/693 (32.61%), Postives = 352/693 (50.79%), Query Frame = 0 Query: 44 LVKALGALLIHLQGR--VFSLEMAGRVPVGRLRRFDLAGFVRLDNNALMSLQIFHEEKHPNVINGRGKAKEGFSLFSLLDQTRSRPGRKVLKEWMLRPLRCVEKIEERQMMVELLLQGEAMEVVNNAGRLLGRVGDVGRVLLRVKRAGATVNDWLTLANTAQHVLLLQNCLIVLGHVAIRQERVVEGGKEEGGAARVVRGVLERISG-EAVRRVQEVVTCVVDLEITKESKVVAVRTGCDAELDRLRAEYDNLEEFLSGEARDVLAEQASRLLSTVSVQFLPQVGFLVIVQASEKVAVETDPR-FRFVFAEGESVYYKTPRMDVLDDSIGDLAAAIHDREATLLRAVGEEVLKEEVPLTEAVRACAEVDVLLSFAQVAGGLAWVKPMITEDKVVVVKDGRHPLQELAVEVFIPNDVFLVGKGGESSDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGLAVVTGPNFSGKSVYIKTVGVLTYLAHLGCFLPCQQALIGLVDGIYTRIASAETVTVQQSTFTIDCSQMNAVFRNATPSSLILVDEFGKGSAETDGLALLVACLSRLH--IL---GARTLVTTHFLELFQRKGLLSPHLAYEISYRMDVFVPXXXXXXXXXXXXXXXXXXIQTVVP-------------LFKLTKGVATSSDGFSCAVLAGLASPLVKRAEHVARC 715 +++A+GALLI L V LE + + + + L G + +D AL SLQIF+EE HP+ + K+KEGFS+FSLLD T ++ G+ +L++WML+PL ++ IE RQ ++ L ++VN+ L DV R LL +K+ ++V DW + + L ++ + L + R +LERI+ E++ +V ++ V+D E +K+ +R G ELD+ R ++ ++ L + +VLA A + ++VQ++P++G+ + S +V PR F F F +G +YK R LD+S GD+ I D + LL + +E+++ EV + + +E+D LS A+ A + +P++ ED V K RHPLQEL VE +IPNDV L G + V+TG N SGKSVY+K VGVL Y+A LG F+P +A IG+V ++TRI S ETV + S+FTIDC+Q+ + R+ SL+L+DEFGKG++ DG+ LL A L L +L G + L+TTHFLE+FQ P+L + +R +V + + VP LF++ G+ATSS+ F CA +AG+ ++ RA + C Sbjct: 194 MIRAVGALLIFLSAENIVNQLETTTTISILAVEKASLDGVMLIDAIALKSLQIFNEEYHPSQLRAWEKSKEGFSIFSLLDHTMTKCGKAMLRQWMLKPLTDIDAIEARQDAIQFFLASSRNDLVNSLLVKLKAFKDVARSLLHMKQMRSSVQDWTVFYQSLNNFLGMRKEVTKLPRDILDSIR-----------------LLERIASLESLEQVSNMLGNVIDFEASKDEAYCVIREGISEELDQAREKFGEIDNVLL-DMSNVLA-NAYPEMRGIAVQYIPRIGYAICCPQSCQV-----PRSFEFQFEDGLQRFYKDVRCCKLDESYGDIHGQILDLQQGLLLELYDELMEHEVTFYDMIDVASELDCFLSLARAAREFNFTRPVMCEDITFVAKTARHPLQELTVESYIPNDVSLDTATGL-------------------------------------------IHVLTGENGSGKSVYLKMVGVLQYMAQLGSFIPVSEARIGIVTKLFTRIQSFETVLLSHSSFTIDCNQIATMLRHCDERSLLLIDEFGKGTSAIDGVCLLAAVLKDLKDTVLRHGGPKILMTTHFLEIFQ-----EPYLRDHLEFR-EVHQIECKDQARIIEETSTIACFVMSSVPINVASKGNVPTAALFEVVPGIATSSNAFRCATVAGVNERVLTRAHDILDC 813
BLAST of NO13G01780 vs. NCBI_GenBank
Match: XP_022087928.1 (mutS protein homolog 5-like isoform X2 [Acanthaster planci]) HSP 1 Score: 312.0 bits (798), Expect = 5.400e-81 Identity = 218/687 (31.73%), Postives = 344/687 (50.07%), Query Frame = 0 Query: 44 LVKALGALLIHLQGRVFSLEMAG---RVPVGRLRRFDLAGFVRLDNNALMSLQIFHEEKHPNVINGRGK-AKEGFSLFSLLDQTRSRPGRKVLKEWMLRPLRCVEKIEERQMMVELLLQGEAMEVVNNAGRLLGRVGDVGRVLLRVKRAGATVNDWLTLANTAQHVLLLQNCLIVLGHVAIRQERVVEGGKEEGGAARVVRGVLERISGEAVRRVQEVVTCVVDLEITKESKVVAVRTGCDAELDRLRAEYDNLEEFLSGEARDVLAEQASRLLSTVSVQFLPQVGFLVIVQASEKVAVETD---PRFRFVFAEGESVYYKTPRMDVLDDSIGDLAAAIHDREATLLRAVGEEVLKEEVPLTEAVRACAEVDVLLSFAQVAGGLAWVKPMITEDKVVVVKDGRHPLQELAVEVFIPNDVFLVGKGGESSDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGLAVVTGPNFSGKSVYIKTVGVLTYLAHLGCFLPCQQALIGLVDGIYTRIASAETVTVQQSTFTIDCSQMNAVFRNATPSSLILVDEFGKGSAETDGLALLVACLSRLHILGART-----LVTTHFLELFQRKGLLSPHLAYEISYR-MDVFVPXXXXXXXXXXXXXXXXXXIQTVVPLFKLTKGVATSSDGFSCAVLAGLASPLVKRAEHVARCLVE 718 +V+A+G LL +L+ + +E+ G RVPV LR F L V +D N +LQIF +E+HP+ G AKEG SLF +L++T+S G ++++ W +RP + + +RQ V + +EV + L V +V R+L ++++A A+VNDW L TA I +G + Q +E K ++ RG E + + ++ +VD + + V+ DA+LD + Y+ L + ++ ARD L + SR + +V +LPQ+G+L+ + + ++ E D P FVF V+YK+ R LD +GD I D E ++ + +L+ L ++ AE+D LLS A A +++P +TED ++ + GRHPLQEL V F+PND F K G+ + +TGPN SGKSVY+K VG++ +++H+G F+P + A IG++DGIYTR+ + E+V+V STF ID +QM NAT +SL+++DEFGKG+ DG+ALL ACL H L T LV++HF + ++K L S + E++Y+ M+V +V L++L +G S + AGL L+KR V L + Sbjct: 229 MVRAVGGLLKYLEKKRVGVELEGYDVRVPVLSLRMFSLERMVSVDENTYSALQIFQKERHPSAYKSGGSGAKEGLSLFGILNKTKSVVGSRLMRVWFMRPSCDLALLNQRQDAVAFFMASANIEVTTSLQEYLKHVKNVARILKQMRQAQASVNDWQALYKTAYSA-------INIGDICRAQRADIEIFK------KIARGFTEDL-----HYIASIINRIVDFDESTAQNRFVVKANVDADLDHRKRTYNGLPDLMTQVARDEL-NRLSRDVEECNVIYLPQLGYLLAIPCTPRMQKEKDFNIPGLEFVFLSNNMVHYKSARTKALDVKLGDTQCEITDLETQIMHKLQNSILERSQVLFTVMQYAAELDCLLSLAAAARDQNYIRPDLTEDNIIHISGGRHPLQELCVTPFVPNDTFSGDKYGK-------------------------------------------MKFLTGPNASGKSVYLKQVGLIAFMSHIGSFVPAEGATIGMLDGIYTRVHTLESVSVGLSTFMIDINQMAVALNNATQNSLVIIDEFGKGTETVDGVALLCACLK--HWLARETLCPHVLVSSHFHSIIKQKMLPS---SQELTYQTMEVLHSG------------------DEMVFLYQLIEGHTELSYASHISAQAGLPDELLKRGNRVTDLLAQ 830
BLAST of NO13G01780 vs. NCBI_GenBank
Match: XP_022087927.1 (mutS protein homolog 5-like isoform X1 [Acanthaster planci]) HSP 1 Score: 312.0 bits (798), Expect = 5.400e-81 Identity = 218/687 (31.73%), Postives = 344/687 (50.07%), Query Frame = 0 Query: 44 LVKALGALLIHLQGRVFSLEMAG---RVPVGRLRRFDLAGFVRLDNNALMSLQIFHEEKHPNVINGRGK-AKEGFSLFSLLDQTRSRPGRKVLKEWMLRPLRCVEKIEERQMMVELLLQGEAMEVVNNAGRLLGRVGDVGRVLLRVKRAGATVNDWLTLANTAQHVLLLQNCLIVLGHVAIRQERVVEGGKEEGGAARVVRGVLERISGEAVRRVQEVVTCVVDLEITKESKVVAVRTGCDAELDRLRAEYDNLEEFLSGEARDVLAEQASRLLSTVSVQFLPQVGFLVIVQASEKVAVETD---PRFRFVFAEGESVYYKTPRMDVLDDSIGDLAAAIHDREATLLRAVGEEVLKEEVPLTEAVRACAEVDVLLSFAQVAGGLAWVKPMITEDKVVVVKDGRHPLQELAVEVFIPNDVFLVGKGGESSDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGLAVVTGPNFSGKSVYIKTVGVLTYLAHLGCFLPCQQALIGLVDGIYTRIASAETVTVQQSTFTIDCSQMNAVFRNATPSSLILVDEFGKGSAETDGLALLVACLSRLHILGART-----LVTTHFLELFQRKGLLSPHLAYEISYR-MDVFVPXXXXXXXXXXXXXXXXXXIQTVVPLFKLTKGVATSSDGFSCAVLAGLASPLVKRAEHVARCLVE 718 +V+A+G LL +L+ + +E+ G RVPV LR F L V +D N +LQIF +E+HP+ G AKEG SLF +L++T+S G ++++ W +RP + + +RQ V + +EV + L V +V R+L ++++A A+VNDW L TA I +G + Q +E K ++ RG E + + ++ +VD + + V+ DA+LD + Y+ L + ++ ARD L + SR + +V +LPQ+G+L+ + + ++ E D P FVF V+YK+ R LD +GD I D E ++ + +L+ L ++ AE+D LLS A A +++P +TED ++ + GRHPLQEL V F+PND F K G+ + +TGPN SGKSVY+K VG++ +++H+G F+P + A IG++DGIYTR+ + E+V+V STF ID +QM NAT +SL+++DEFGKG+ DG+ALL ACL H L T LV++HF + ++K L S + E++Y+ M+V +V L++L +G S + AGL L+KR V L + Sbjct: 248 MVRAVGGLLKYLEKKRVGVELEGYDVRVPVLSLRMFSLERMVSVDENTYSALQIFQKERHPSAYKSGGSGAKEGLSLFGILNKTKSVVGSRLMRVWFMRPSCDLALLNQRQDAVAFFMASANIEVTTSLQEYLKHVKNVARILKQMRQAQASVNDWQALYKTAYSA-------INIGDICRAQRADIEIFK------KIARGFTEDL-----HYIASIINRIVDFDESTAQNRFVVKANVDADLDHRKRTYNGLPDLMTQVARDEL-NRLSRDVEECNVIYLPQLGYLLAIPCTPRMQKEKDFNIPGLEFVFLSNNMVHYKSARTKALDVKLGDTQCEITDLETQIMHKLQNSILERSQVLFTVMQYAAELDCLLSLAAAARDQNYIRPDLTEDNIIHISGGRHPLQELCVTPFVPNDTFSGDKYGK-------------------------------------------MKFLTGPNASGKSVYLKQVGLIAFMSHIGSFVPAEGATIGMLDGIYTRVHTLESVSVGLSTFMIDINQMAVALNNATQNSLVIIDEFGKGTETVDGVALLCACLK--HWLARETLCPHVLVSSHFHSIIKQKMLPS---SQELTYQTMEVLHSG------------------DEMVFLYQLIEGHTELSYASHISAQAGLPDELLKRGNRVTDLLAQ 849 The following BLAST results are available for this feature:
BLAST of NO13G01780 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
The following polypeptide feature(s) derives from this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G01780 ID=NO13G01780|Name=NO13G01780|organism=Nannochloropsis oceanica|type=gene|length=4278bpback to top protein sequence of NO13G01780.4 >NO13G01780.4-protein ID=NO13G01780.4-protein|Name=NO13G01780.4|organism=Nannochloropsis oceanica|type=polypeptide|length=802bpback to top protein sequence of NO13G01780.3 >NO13G01780.3-protein ID=NO13G01780.3-protein|Name=NO13G01780.3|organism=Nannochloropsis oceanica|type=polypeptide|length=802bpback to top protein sequence of NO13G01780.2 >NO13G01780.2-protein ID=NO13G01780.2-protein|Name=NO13G01780.2|organism=Nannochloropsis oceanica|type=polypeptide|length=933bpback to top protein sequence of NO13G01780.1 >NO13G01780.1-protein ID=NO13G01780.1-protein|Name=NO13G01780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=992bpback to top Synonyms
Publications
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