NO13G00610, NO13G00610 (gene) Nannochloropsis oceanica

Overview
NameNO13G00610
Unique NameNO13G00610
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4215
Alignment locationchr13:205801..210015 +

Link to JBrowse

Properties
Property NameValue
DescriptionBranched chain alpha-keto acid dehydrogenase E1 beta subunit
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:205801..210015 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR029061THDP-binding
IPR009014Transketo_C/Pyr-ferredox_oxred
IPR033248Transketolase_C
IPR005475Transketolase-like_Pyr-bd
Homology
[Close]
BLAST of NO13G00610 vs. NCBI_GenBank
Match: CBJ32712.1 (Branched chain alpha-keto acid dehydrogenase E1 beta subunit [Ectocarpus siliculosus])

HSP 1 Score: 542.3 bits (1396), Expect = 1.100e-150
Identity = 254/322 (78.88%), Postives = 288/322 (89.44%), Query Frame = 0 
Query:   46 RMNLFTAINDALRTAMDTDQSAIIFGEDVAFGGVFRCTVGLREDFGDGRVFNTPLCEQGIAGFGIGYASLGKTAIAEIQFADYIFPAFDQLVNEAAKFRYRSGNQFNCGGLTVRAPCGAVGHGGHYHSQSPEAYFTHTPGLKVVMPRSPAEAKGLLLSSIRAPDPVIFLEPKALYRAAVEEVPEGDYTIPLGRADVLREGRDVTVVGWGGQLRVLEKACDLAADEGIACELIDLRTLLPWDADTVMASVHKTGRLVVSHEAPKTGGFAAEVVAEMQERCFLFLEAPVQRVCGYDTPFPLVFEKYYVPDAYKNLEAIKKAVHF 368
            RMNLFTA+N  LRTAM+TD +AI+FGEDVAFGGVFRCT GL+E FG  RVF++ LCEQGIAGF IGYAS+GKTAIAEIQFADYIFPAFDQ+VNEAAKFRYRSG+QFNCGGLT+RAPCGAVGHGGHYHSQSPE+YF HTPGLKVVMPR+  EAKGLLL+S+R PDPVIF EPK LYR +VE+VP+GDY +PLG ADV+REG DVT+VGWG QLRV+ +ACD A  EGI+CELIDLRT+LPWD DTV  SV KTGRLVVSHEAP+TGGFAAEV A+MQERCFL LEAPVQRVCGYDTPFPLVFEK+YVP  +K L+A++ AV++
Sbjct:  130 RMNLFTAVNAGLRTAMETDDTAIVFGEDVAFGGVFRCTGGLKEQFGPDRVFDSTLCEQGIAGFAIGYASMGKTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGDQFNCGGLTIRAPCGAVGHGGHYHSQSPESYFAHTPGLKVVMPRNATEAKGLLLASVREPDPVIFFEPKILYRTSVEDVPDGDYEVPLGVADVMREGTDVTLVGWGAQLRVMSEACDDAEKEGISCELIDLRTILPWDFDTVSRSVKKTGRLVVSHEAPRTGGFAAEVAADMQERCFLHLEAPVQRVCGYDTPFPLVFEKFYVPGRFKVLDAVRDAVNY 451
[Close]
BLAST of NO13G00610 vs. NCBI_GenBank
Match: XP_008605775.1 (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial [Saprolegnia diclina VS20] >EQC40931.1 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial [Saprolegnia diclina VS20])

HSP 1 Score: 537.3 bits (1383), Expect = 3.600e-149
Identity = 248/345 (71.88%), Postives = 299/345 (86.67%), Query Frame = 0 
Query:   23 RLLSSSLRTTTRSYTPAAGVMTKRMNLFTAINDALRTAMDTDQSAIIFGEDVAFGGVFRCTVGLREDFGDGRVFNTPLCEQGIAGFGIGYASLGKTAIAEIQFADYIFPAFDQLVNEAAKFRYRSGNQFNCGGLTVRAPCGAVGHGGHYHSQSPEAYFTHTPGLKVVMPRSPAEAKGLLLSSIRAPDPVIFLEPKALYRAAVEEVPEGDYTIPLGRADVLREGRDVTVVGWGGQLRVLEKACDLAADEGIACELIDLRTLLPWDADTVMASVHKTGRLVVSHEAPKTGGFAAEVVAEMQERCFLFLEAPVQRVCGYDTPFPLVFEKYYVPDAYKNLEAIKKAVHF 368
            R LS+   +T R    +  ++T+RMN+FTA+NDA+R AM+TD +A++FGEDVAFGGVFRCTV L+E FG+ RVFN+PLCEQGIAGF IGYAS+G+TAIAEIQFADYIFPAFDQ+VNEAAKFRYRSGNQF+CG LT RAP GAVGHG HYHSQSPEAYF HTPGLKVV+PR+P +AKGLLL+SIR P+PV+F EPKALYRA+V +VP GD+T+PLG+AD++R G D+T+VGWG Q+RVLE ACD+A + G++CELIDL+T+ PWD DTV  SV KTGRL+VSHEAPKTGGFA+E+ + +QERCFL LEAPVQRVCGYDTPFPL +EK Y+PDA KN EAIK AV++
Sbjct:    6 RRLSTLASSTLRRQFASTPLVTERMNMFTALNDAMRVAMETDPTAVVFGEDVAFGGVFRCTVDLKEQFGEDRVFNSPLCEQGIAGFAIGYASIGRTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFDCGKLTFRAPYGAVGHGAHYHSQSPEAYFAHTPGLKVVIPRNPTQAKGLLLASIRDPNPVVFFEPKALYRASVSDVPVGDFTVPLGQADIMRSGTDITIVGWGAQMRVLEDACDMAEEAGVSCELIDLQTITPWDVDTVEQSVRKTGRLIVSHEAPKTGGFASEIASTIQERCFLNLEAPVQRVCGYDTPFPLAYEKLYLPDALKNFEAIKHAVNY 350
[Close]
BLAST of NO13G00610 vs. NCBI_GenBank
Match: OQR94235.1 (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial precursor [Thraustotheca clavata])

HSP 1 Score: 537.0 bits (1382), Expect = 4.700e-149
Identity = 245/335 (73.13%), Postives = 294/335 (87.76%), Query Frame = 0 
Query:   33 TRSYTPAAGVMTKRMNLFTAINDALRTAMDTDQSAIIFGEDVAFGGVFRCTVGLREDFGDGRVFNTPLCEQGIAGFGIGYASLGKTAIAEIQFADYIFPAFDQLVNEAAKFRYRSGNQFNCGGLTVRAPCGAVGHGGHYHSQSPEAYFTHTPGLKVVMPRSPAEAKGLLLSSIRAPDPVIFLEPKALYRAAVEEVPEGDYTIPLGRADVLREGRDVTVVGWGGQLRVLEKACDLAADEGIACELIDLRTLLPWDADTVMASVHKTGRLVVSHEAPKTGGFAAEVVAEMQERCFLFLEAPVQRVCGYDTPFPLVFEKYYVPDAYKNLEAIKKAVHF 368
            TR    +A ++T+RMN+FTA+NDA+R AM+TD +A++FGEDVAFGGVFRCTV L+E FG+ RVFN+PLCEQGIAGF IGYAS+G+TAIAEIQFADYIFPAFDQ+VNEAAKFRYRSGNQF+CG LT R P GAVGHG HYHSQSPEAYF HTPGLKVVMPR+P +AKGLLL+SIR P+PV+F EPKALYRA+V EVP GD+TIPLG+AD++R G D+T+VGWG Q+RVLE ACD+A + G++CELIDL+T+ PWD DTV  SV KTGRL++SHEAP+TGGFA+E+ + +QERCFL LEAP+QRVCGYDTPFPL +EK Y+PDA KN EAIK AV++
Sbjct:   16 TRGNATSASLVTERMNMFTALNDAMRVAMETDPTAVVFGEDVAFGGVFRCTVDLKEKFGEDRVFNSPLCEQGIAGFAIGYASIGRTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFDCGKLTFRTPYGAVGHGAHYHSQSPEAYFAHTPGLKVVMPRNPTQAKGLLLASIRDPNPVVFFEPKALYRASVSEVPVGDFTIPLGQADIMRTGSDITLVGWGAQMRVLEDACDMAEEAGVSCELIDLQTITPWDVDTVEQSVRKTGRLIISHEAPRTGGFASEIASTIQERCFLNLEAPIQRVCGYDTPFPLAYEKLYLPDALKNFEAIKHAVNY 350
[Close]
BLAST of NO13G00610 vs. NCBI_GenBank
Match: GAX98692.1 (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial [Pythium insidiosum])

HSP 1 Score: 531.9 bits (1369), Expect = 1.500e-147
Identity = 251/346 (72.54%), Postives = 298/346 (86.13%), Query Frame = 0 
Query:   25 LSSSLRTTTRSYTPA---AGVMTKRMNLFTAINDALRTAMDTDQSAIIFGEDVAFGGVFRCTVGLREDFGDGRVFNTPLCEQGIAGFGIGYASLGKTAIAEIQFADYIFPAFDQLVNEAAKFRYRSGNQFNCGGLTVRAPCGAVGHGGHYHSQSPEAYFTHTPGLKVVMPRSPAEAKGLLLSSIRAPDPVIFLEPKALYRAAVEEVPEGDYTIPLGRADVLREGRDVTVVGWGGQLRVLEKACDLAADEGIACELIDLRTLLPWDADTVMASVHKTGRLVVSHEAPKTGGFAAEVVAEMQERCFLFLEAPVQRVCGYDTPFPLVFEKYYVPDAYKNLEAIKKAVHF 368
            L S  +   RS + A   A V TK+MNLFTAINDA+R A+ TD +A++FGEDVAFGGVFRC+VGL+++FG+ RVFN+PLCEQGIAGF IGYA+ G+TAIAEIQFADYIFPAFDQ+VNEAAK+RYRSG +F+CG LT RAP GAVGHGGHYHSQSPEAYFTHTPGLKVVMPR P +AKGLLL+SIR P+PV+FLEPKALYRA+V +VP G++T  LG+AD+++ G DVTVVGWG Q+RVLE+AC  A + GI+CELIDL+T++PWD DT+  SV KTGRL+VSHEAPKTGGFAAE+ A +Q+RCFL LEAP+QRVCGYDTPFPLVFEKYY+PDA KN EAIKK + F
Sbjct:   10 LRSLAKRQARSLSAAAATAAVETKQMNLFTAINDAMRVALATDPTAVVFGEDVAFGGVFRCSVGLKDEFGEDRVFNSPLCEQGIAGFAIGYAATGRTAIAEIQFADYIFPAFDQIVNEAAKYRYRSGGEFDCGKLTFRAPYGAVGHGGHYHSQSPEAYFTHTPGLKVVMPRDPVKAKGLLLASIRDPNPVVFLEPKALYRASVADVPVGEFTEELGKADIVKRGSDVTVVGWGAQMRVLEEACSYAEELGISCELIDLQTIMPWDVDTIEHSVRKTGRLIVSHEAPKTGGFAAEIAATIQDRCFLSLEAPIQRVCGYDTPFPLVFEKYYIPDALKNFEAIKKVMDF 355
[Close]
BLAST of NO13G00610 vs. NCBI_GenBank
Match: XP_008873308.1 (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial [Aphanomyces invadans] >ETV97747.1 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial [Aphanomyces invadans])

HSP 1 Score: 527.7 bits (1358), Expect = 2.900e-146
Identity = 243/334 (72.75%), Postives = 289/334 (86.53%), Query Frame = 0 
Query:   34 RSYTPAAGVMTKRMNLFTAINDALRTAMDTDQSAIIFGEDVAFGGVFRCTVGLREDFGDGRVFNTPLCEQGIAGFGIGYASLGKTAIAEIQFADYIFPAFDQLVNEAAKFRYRSGNQFNCGGLTVRAPCGAVGHGGHYHSQSPEAYFTHTPGLKVVMPRSPAEAKGLLLSSIRAPDPVIFLEPKALYRAAVEEVPEGDYTIPLGRADVLREGRDVTVVGWGGQLRVLEKACDLAADEGIACELIDLRTLLPWDADTVMASVHKTGRLVVSHEAPKTGGFAAEVVAEMQERCFLFLEAPVQRVCGYDTPFPLVFEKYYVPDAYKNLEAIKKAVHF 368
            R +   A   T+RMN+FTA+NDA+R AM+TD +A +FGEDVAFGGVFRCTV LRE FG+ RVFN+PLCEQGIAGF IGYAS+G+TAIAEIQFADYIFPAFDQ+VNEAAKFRYRSGNQ++CG LT RAP GAVGHG HYHSQSPEAYF HTPGLKVV+PR+P +AKGLLL+SIR P+PV+F EPKALYRA+V EVP GD+TIPLG+AD++R G DVT+VGWG Q+RVLE+ CD+A + G++CELIDL+T+LPWD DT+  SV KTGRL+VSHEAP+TGGFA E+ + +QERCFL LEAP+ RV GYDTPFPL  EK+Y+PDA KN EAIKK V++
Sbjct:   10 RRFASTAAPATERMNMFTALNDAMRVAMETDPTAAVFGEDVAFGGVFRCTVDLREQFGEDRVFNSPLCEQGIAGFAIGYASVGRTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQWDCGKLTFRAPYGAVGHGAHYHSQSPEAYFAHTPGLKVVIPRNPVQAKGLLLASIRDPNPVVFFEPKALYRASVAEVPVGDFTIPLGQADIVRSGTDVTLVGWGAQMRVLEETCDMAEEAGVSCELIDLQTILPWDVDTIEQSVRKTGRLIVSHEAPRTGGFAGEIASTIQERCFLSLEAPIMRVTGYDTPFPLAHEKFYLPDALKNFEAIKKIVNY 343
[Close]
BLAST of NO13G00610 vs. NCBI_GenBank
Match: XP_009829616.1 (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial [Aphanomyces astaci] >ETV80669.1 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial [Aphanomyces astaci])

HSP 1 Score: 526.2 bits (1354), Expect = 8.300e-146
Identity = 245/344 (71.22%), Postives = 296/344 (86.05%), Query Frame = 0 
Query:   24 LLSSSLRTTTRSYTPAAGVMTKRMNLFTAINDALRTAMDTDQSAIIFGEDVAFGGVFRCTVGLREDFGDGRVFNTPLCEQGIAGFGIGYASLGKTAIAEIQFADYIFPAFDQLVNEAAKFRYRSGNQFNCGGLTVRAPCGAVGHGGHYHSQSPEAYFTHTPGLKVVMPRSPAEAKGLLLSSIRAPDPVIFLEPKALYRAAVEEVPEGDYTIPLGRADVLREGRDVTVVGWGGQLRVLEKACDLAADEGIACELIDLRTLLPWDADTVMASVHKTGRLVVSHEAPKTGGFAAEVVAEMQERCFLFLEAPVQRVCGYDTPFPLVFEKYYVPDAYKNLEAIKKAVHF 368
            +L+ S+R   R  + A  + T+RMN+FTA+NDA+R AM+TD +A +FGEDVAFGGVFRCTV LRE FG+ RVFN+PLCEQGIAGF IGYAS+G+TAIAEIQFADYIFPAFDQ+VNEAAKFRYRSGNQ++CG LT RAP GAVGHG HYHSQSPEAYF HTPGLKVV+PR+P +AKGLLL+SIR P+PV+F EPKALYRA+V EVP GD+T+PLG+AD++R G DVT+VGWG Q+RVLE+ CD+A + G++CELIDL+T+LPWD DT+  SV KTGRL+VSHEAP+TGGFA E+ + +QERCFL LEAP+ RV GYDTPFPL  EK+Y+PDA KN EAIKK V++
Sbjct:    1 MLAKSVR---RFSSAAVPLKTERMNMFTALNDAMRVAMETDPTAAVFGEDVAFGGVFRCTVDLREQFGEDRVFNSPLCEQGIAGFAIGYASVGRTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQWDCGKLTFRAPYGAVGHGAHYHSQSPEAYFAHTPGLKVVIPRNPVQAKGLLLASIRDPNPVVFFEPKALYRASVAEVPVGDFTVPLGQADIVRSGSDVTIVGWGAQMRVLEETCDMAEEAGVSCELIDLQTILPWDVDTIEQSVRKTGRLIVSHEAPRTGGFAGEIASTIQERCFLSLEAPILRVTGYDTPFPLAHEKFYLPDALKNFEAIKKIVNY 341
[Close]
BLAST of NO13G00610 vs. NCBI_GenBank
Match: OQR87806.1 (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial precursor [Achlya hypogyna])

HSP 1 Score: 525.8 bits (1353), Expect = 1.100e-145
Identity = 245/347 (70.61%), Postives = 294/347 (84.73%), Query Frame = 0 
Query:   21 RRRLLSSSLRTTTRSYTPAAGVMTKRMNLFTAINDALRTAMDTDQSAIIFGEDVAFGGVFRCTVGLREDFGDGRVFNTPLCEQGIAGFGIGYASLGKTAIAEIQFADYIFPAFDQLVNEAAKFRYRSGNQFNCGGLTVRAPCGAVGHGGHYHSQSPEAYFTHTPGLKVVMPRSPAEAKGLLLSSIRAPDPVIFLEPKALYRAAVEEVPEGDYTIPLGRADVLREGRDVTVVGWGGQLRVLEKACDLAADEGIACELIDLRTLLPWDADTVMASVHKTGRLVVSHEAPKTGGFAAEVVAEMQERCFLFLEAPVQRVCGYDTPFPLVFEKYYVPDAYKNLEAIKKAVHF 368
            RR +++        S  P A   T+RMN+FTA+NDA+R AM+TD SA+IFGEDVAFGGVFRCTV L+E FG+ RVFN+PLCEQGIAGF IGYAS+G+TAIAEIQFADYIFPAFDQ+VNEAAKFRYRSGNQF+CG LT RAP GAVGHG HYHSQSPEAYF HTPGLKVV+PR+P +AKGLLL+SIR P+PV+F EPKALYRA+V +VP GD+ +PLG AD++R G DVTV+GWG Q+RVLE ACD+A + G++CELIDL+T+ PWD DT+  SV KTGRL++SHEAPKTGGFA+E+ + +Q+RCFL LEAP+QRVCGYDTPFPL +EK Y+PDA KN EAIK  V++
Sbjct:    5 RRMMMAPKALIRNASTAPVA---TERMNMFTALNDAMRVAMETDPSAVIFGEDVAFGGVFRCTVDLKEKFGEDRVFNSPLCEQGIAGFAIGYASIGRTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFDCGKLTFRAPYGAVGHGAHYHSQSPEAYFAHTPGLKVVIPRNPTQAKGLLLASIRDPNPVVFFEPKALYRASVSDVPVGDFELPLGVADIVRPGTDVTVLGWGAQMRVLEDACDMAEEAGVSCELIDLQTITPWDVDTIEQSVRKTGRLIISHEAPKTGGFASEIASTIQDRCFLNLEAPIQRVCGYDTPFPLAYEKLYLPDALKNFEAIKHVVNY 348
[Close]
BLAST of NO13G00610 vs. NCBI_GenBank
Match: GBG27399.1 (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 525.4 bits (1352), Expect = 1.400e-145
Identity = 246/322 (76.40%), Postives = 282/322 (87.58%), Query Frame = 0 
Query:   47 MNLFTAINDALRTAMDTDQSAIIFGEDVAFGGVFRCTVGLREDFGDGRVFNTPLCEQGIAGFGIGYASLGKTAIAEIQFADYIFPAFDQLVNEAAKFRYRSGNQFNCGGLTVRAPCGAVGHGGHYHSQSPEAYFTHTPGLKVVMPRSPAEAKGLLLSSIRAPDPVIFLEPKALYRAAVEEVPEGDYTIPLGRADVLREGRDVTVVGWGGQLRVLEKACDLAADE-GIACELIDLRTLLPWDADTVMASVHKTGRLVVSHEAPKTGGFAAEVVAEMQERCFLFLEAPVQRVCGYDTPFPLVFEKYYVPDAYKNLEAIKKAVHF 368
            MN+F AINDA+RTA+ +D SA++FGEDVAFGGVFRC++GLR++FG  RVFNTPLCEQGIAGFGIGYAS G+TAIAE+QFADYIFPAFDQLVNEAAK RYRSGNQFNCGGLTVRAP GA+GHGGHYHSQSPEAYFTHTPGLKVV+PR P +AKGLLLS IR P+P IF EPKALYR +V +VP GDYTIPLG+A++++ G DVTVVGWG Q+ VL KACD+A  E GI+CELIDLRT++PWD  T++ SV KTGRLVVSHEAPKT GFAAE+ A + ++CFL+LEAP+QRVCGYDTPFPLVFEK YVPD  KN EAIK  V F
Sbjct:    1 MNMFMAINDAMRTALKSDDSAVLFGEDVAFGGVFRCSMGLRDEFGKNRVFNTPLCEQGIAGFGIGYASTGRTAIAEVQFADYIFPAFDQLVNEAAKMRYRSGNQFNCGGLTVRAPYGAIGHGGHYHSQSPEAYFTHTPGLKVVIPRDPIQAKGLLLSCIRDPNPCIFFEPKALYRGSVGDVPVGDYTIPLGKAEIVQPGTDVTVVGWGAQMHVLAKACDMAQSEMGISCELIDLRTIVPWDIATIVDSVKKTGRLVVSHEAPKTSGFAAEIAATISDKCFLYLEAPIQRVCGYDTPFPLVFEKCYVPDHLKNFEAIKHTVDF 322
[Close]
BLAST of NO13G00610 vs. NCBI_GenBank
Match: XP_012198182.1 (2-oxoisovalerate dehydrogenase subunit beta [Saprolegnia parasitica CBS 223.65] >KDO30998.1 2-oxoisovalerate dehydrogenase subunit beta [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 525.0 bits (1351), Expect = 1.900e-145
Identity = 245/348 (70.40%), Postives = 298/348 (85.63%), Query Frame = 0 
Query:   20 LRRRLLSSSLRTTTRSYTPAAGVMTKRMNLFTAINDALRTAMDTDQSAIIFGEDVAFGGVFRCTVGLREDFGDGRVFNTPLCEQGIAGFGIGYASLGKTAIAEIQFADYIFPAFDQLVNEAAKFRYRSGNQFNCGGLTVRAPCGAVGHGGHYHSQSPEAYFTHTPGLKVVMPRSPAEAKGLLLSSIRAPDPVIFLEPKALYRAAVEEVPEGDYTIPLGRADVLREGRDVTVVGWGGQLRVLEKACDLAADEGIACELIDLRTLLPWDADTVMASVHKTGRLVVSHEAPKTGGFAAEVVAEMQERCFLFLEAPVQRVCGYDTPFPLVFEKYYVPDAYKNLEAIKKAVHF 368
            LR +L SS+LR   R Y  +A ++T+RMN+FTA+NDA+R AM+TD +A++FGEDVAFGGVFRCTV L+E FG+ RVFN+PLCEQGIAGF IGYAS+G+TAIAEIQFADYIFPAFDQ+VNEAAKFRYRSGNQF+CG LT RAP GAVGHG HYHSQSPEAYF HTPGLKVV+PR+P +AKGLLL+SIR P+PV+F EPKALYRA+V +VP GD+T+PLG+AD++R G D+T+VGWG Q+RVLE ACD+A + G++CELIDL+T+ PWD DT+  SV KTGRL+      KTGGFA+E+ + +QERCFL LEAP+QRVCGYDTPFPL +EK Y+PDA KN EAIK AV++
Sbjct:    6 LRSKLASSTLR---RQYASSAPLVTERMNMFTALNDAMRVAMETDPTAVVFGEDVAFGGVFRCTVDLKEKFGEDRVFNSPLCEQGIAGFAIGYASIGRTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFDCGKLTFRAPYGAVGHGAHYHSQSPEAYFAHTPGLKVVIPRNPTQAKGLLLASIRDPNPVVFFEPKALYRASVSDVPVGDFTVPLGQADIMRSGTDITIVGWGAQMRVLEDACDMAEEAGVSCELIDLQTITPWDVDTIEQSVRKTGRLI------KTGGFASEIASTIQERCFLNLEAPIQRVCGYDTPFPLAYEKLYLPDALKNFEAIKHAVNY 344
[Close]
BLAST of NO13G00610 vs. NCBI_GenBank
Match: XP_009529584.1 (hypothetical protein PHYSODRAFT_561567 [Phytophthora sojae] >EGZ15835.1 hypothetical protein PHYSODRAFT_561567 [Phytophthora sojae])

HSP 1 Score: 521.2 bits (1341), Expect = 2.700e-144
Identity = 244/321 (76.01%), Postives = 280/321 (87.23%), Query Frame = 0 
Query:   47 MNLFTAINDALRTAMDTDQSAIIFGEDVAFGGVFRCTVGLREDFGDGRVFNTPLCEQGIAGFGIGYASLGKTAIAEIQFADYIFPAFDQLVNEAAKFRYRSGNQFNCGGLTVRAPCGAVGHGGHYHSQSPEAYFTHTPGLKVVMPRSPAEAKGLLLSSIRAPDPVIFLEPKALYRAAVEEVPEGDYTIPLGRADVLREGRDVTVVGWGGQLRVLEKACDLAADEGIACELIDLRTLLPWDADTVMASVHKTGRLVVSHEAPKTGGFAAEVVAEMQERCFLFLEAPVQRVCGYDTPFPLVFEKYYVPDAYKNLEAIKKAVHF 368
            MN+FTAINDA+R AM+TD SA++FGEDVAFGGVFRC+V LRE FG  RVFN+PLCEQ IAGF IGYAS G+TAIAEIQFADYIFPAFDQ+VNEAAKFRYRSGN+FNCG LT RAP GAVGHGGHYHSQSPEAYF HTPGLKVV+PR+PA AKGLLL+SIR P+PV+FLEPKALYRA+V EVP GDY   L  A+++R G DVTVVGWG Q+RVLE+AC  A D GI+CELIDL+T+ PWDADT+  SV KTGRLV+SHEAPK+GGFAAE+ + MQERCFL LEAP+QRVCGYDTPFPL +E +Y+PDA +N EAIKK V++
Sbjct:    1 MNMFTAINDAMRVAMETDPSAVLFGEDVAFGGVFRCSVDLREKFGSDRVFNSPLCEQAIAGFAIGYASTGRTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNEFNCGKLTFRAPYGAVGHGGHYHSQSPEAYFAHTPGLKVVVPRNPAAAKGLLLASIRDPNPVLFLEPKALYRASVGEVPVGDYVQNLSEAEIVRRGTDVTVVGWGAQMRVLEEACSYAEDVGISCELIDLQTIFPWDADTIEHSVRKTGRLVISHEAPKSGGFAAEISSSMQERCFLSLEAPIQRVCGYDTPFPLAYESHYLPDALRNFEAIKKVVNY 321
The following BLAST results are available for this feature:
BLAST of NO13G00610 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBJ32712.11.100e-15078.88Branched chain alpha-keto acid dehydrogenase E1 be... [more]
XP_008605775.13.600e-14971.882-oxoisovalerate dehydrogenase subunit beta, mitoc... [more]
OQR94235.14.700e-14973.132-oxoisovalerate dehydrogenase subunit beta, mitoc... [more]
GAX98692.11.500e-14772.542-oxoisovalerate dehydrogenase subunit beta, mitoc... [more]
XP_008873308.12.900e-14672.752-oxoisovalerate dehydrogenase subunit beta, mitoc... [more]
XP_009829616.18.300e-14671.222-oxoisovalerate dehydrogenase subunit beta, mitoc... [more]
OQR87806.11.100e-14570.612-oxoisovalerate dehydrogenase subunit beta, mitoc... [more]
GBG27399.11.400e-14576.40Pyruvate dehydrogenase E1 component subunit beta, ... [more]
XP_012198182.11.900e-14570.402-oxoisovalerate dehydrogenase subunit beta [Sapro... [more]
XP_009529584.12.700e-14476.01hypothetical protein PHYSODRAFT_561567 [Phytophtho... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001837NSK001837Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G00610.1NO13G00610.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|117466gene_6955Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101735g1gene8696Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G00610.1NO13G00610.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G00610 ID=NO13G00610|Name=NO13G00610|organism=Nannochloropsis oceanica|type=gene|length=4215bp
TCCCAGCGCTCCACCTCTTTCTTCTCCTCCTCCCTCTTCTACTCCTACTG
GTGCTAGTACTGCAGCTGCTACCGCTGTTTCGCTTCGTAGAGTTACGGTA
GAACCTGGCGCACTTCCTCGACTTCCTTCTTCTTTCCACCCTCCCTCTTC
CTCTCCCTTCTCCTCCTCCTCATTGGAATCCTCGTCTTCCAAGTGTAAGA
CCGCCAACGTTAGATGCAACTTGGATGGGGATACCATTGCCTCCTCCAGT
GTCGGGCCGTGCATCTCTATCATTTCGTCTTGGATCGACTTAATACTAGA
ATGAAGGGAGGGAGAGGAGAGCTTGACTGCGAGGAAGTGGGTTGGGCGGG
AAGGAGGAGGAGAAGGATGGAAGCGCTTGTGCTGTTGGCGATTTATGTTT
TGCTGTGCTTGTGAGTCTTGCAGGCTCACGTTCTCTTCTGTGTGCCACGA
GGGGTTTTGGAACTTCGAGGGGGTAAAGTCACAGGAGGACGAGGGGGAAG
AAGAGAGGTGGGCAATAGAATTCTGCATTGTCCTTTTCCACGGATGCAAT
GAGAGGATAAAAGATGAAAGTGGGCCGGCAAAGGGGGATTGGCGAAAATG
CGGTGCGCCGGAAGAAGGCAATGACGACGACGAGGAGGAGAGGATGAGAA
GGCTAGCGAGCAGGGTCCGGGAGAGGGGAGGAGAACGAGGAGCTATTGGC
TTGAGTCTAGGCTCGGCACGGAATACCAAGGAAAGAGGAACCTTACAGGA
GGAGAGGGACTCGAGGTGCATTCACCCGCCTGCGGTGACGATGAATGTGC
GGGATGTGGGAGGGGAGAGGAGAGGACGAGTGAATAAGGTGTGTCTTTGG
CAAGTGTAATTGCTCGGCGCGGCATGAAGAGGTCTTGGTTTGCATTTTAA
TTCTCATCTCACTCCATTTCCCCGGTGATGCTTGAGTGACCCTGCAAGAT
GGCACAGGGGGAGGGAGGAGACGTCAAGTTGGGGAGGGGGGAGGCTAAAA
CATTTACGGGCGGTCCATACGCGCAAAGCGATCCGAGTCCGAGGGGCTGG
AGGCTGTCAATAAGAGTGACAGTGCCAACTCTCTTCTCGCTTTGGTGTCA
CTGGTGGTAGTGATGGTCCAGCGTAGGGACTCGTAGCTTTGTAAGGGGTG
TTGTGAAGGGGGGAATGGGGAGGTCGTCTGATAACCGACGTCACTGTGTC
AACAACCCCGCCTATTCTGCGCCTCTTTGCTGGGACCAGGGCCAAATACA
CGCACATTTATGTTCAACAGCGTCCTAACATAATCTCCCTACACCCTAAA
ATCTATGCACGGGCATTCTATCTGCGCTTTTAAACCCAACCACAGGCCGA
CAGCGGCAAAAATTGGGCAGTGCAGCAGAAGGTCGCACAAAGCACATCAA
CGCAAGCAGGCGTCTCACAAAAACCCTCTGCCGGAACACCGTGGACGAGA
TCCAGAACTACATCCACGCTCGTGCATGCACTATGCAAGGCATTGCGTTC
CTTTCTACCGTCGCAGGGACTGCACGGGCTCCCGGACGCCTGCGTCGTCG
GCTGCTTTCTTCGAGCCTCCGCACGgtacgtgggggtttatgggcatgtc
ctcgacccctcccttctcctcattcttgtcatctccaacacgaataccgg
cagACGACACGCAGCTACACCCCGGCTGCAGGTGTAATGACGAAGCGGAT
GAACTTGTTCACGGCCATCAATGATGCCTTGCGCACAGCCATGGACACGG
ACCAGAGCGCGgtatgtcgcaaggagaggggaggagaagcaagaaaggag
gaaggaatgggagggcttagagacaggaagagaatactttcgctgaattt
attactggagctacgttcaaatgtgtctgtgcatcccggctccactctca
tccaccctttgttccccccttcttccaccctctcacagATTATTTTCGGG
GAGGACGTGGCCTTTGGCGGCGTATTCCGTTGCACTGTGGGTTTGCGCGA
AGATTTCGGAGATGGCCGGGTCTTTAATACGCCCTTGTGCGAGCAAgtaa
ggatttcttgggggcgattgaccaagagctggagcttgagccccatcccc
ccccccaccctccccccctcccatcctcccagGGGATCGCCGGCTTTGGG
ATCGGGTATGCCTCGTTGGGGAAGACAGCAATTGCCGAGATTCAATTTGC
TGATTATATTTTCCCGGCTTTTGATCAGgtagctaagatatgggtggata
ggagggaggaaggggcggagacgacacgtcaggtgtgaaaattcatctag
atttgtcttggtctttttcttctcattattctatttcatcttattctcat
tcttcttattcttctcaaatatcttattattactattattcttataaata
ttatcattcaatattctttcctccaccatgattcacagCTCGTTAACGAG
GCCGCCAAATTTCGGTACCGCTCCGGCAATCAATTCAATTGTGgtacgta
cctccctccctccctccctccctcttcttctcctccctccctccctttac
aattggtggcctgacgccccgaaccccctgtgggggagcttgcctttctc
ctcccttcctccgccctccatctcacccttcctccttcttcccctctctc
cctccctcccttccctttcaccagGGGGCCTGACGGTCCGAGCGCCCTGT
GGAGCCGTCGGTCATGGGGGGCATTACCACTCTCAGTCGCCCGAGGCGTA
TTTCACCCACACACCAGGCCTTAAGgtacggagggagggagggagggagg
gagggagggagacgtggagaaaaatctttcgttctttcactcaccttctc
attttcccctcttttcctccctcccttcctcccttcctccctcccttcct
ccctccctccctccctcttatcctgcagGTGGTGATGCCTCGTTCTCCTG
CTGAGGCGAAGGGGCTCCTCCTCTCTTCTATTCGCGCGCCAGATCCCGTC
ATTTTCCTAGAGCCAAAGGCACTGTACCGCGCTGCGGTGGAGGAGgtgag
ggagggagggaaggaggggagggaagggagggtagcgtgggacctttggg
ttgacatttcttcctccctccctccctccctccctccttctccccctccc
tccctccctcagGTCCCGGAAGGCGACTACACCATCCCCCTCGGACGGGC
GGACGTGCTGCGGGAGGGTCGTGACGTCACGGTGGTGGGATGGGGAGGGC
AACTGAGGGTGCTGGAGAAGgtgagcgagagagggagggagggagggagg
gagggagggacccaaacagcactctgacggtttgtttacaccgccctccc
tccctccccccctccccttcctcagGCCTGCGACTTGGCCGCTGATGAAG
GGATAGCCTGCGAGCTCATCGATCTTCGGACTCTCTTGCCTTGGGACGCA
GACACCGTCATGGCCTCGGTCCACAAAACGGGCCGGCTGGTGGTTAGCCA
TGAGGCGCCTgtacgttccctgcctccctccctccctctcttcatgtgaa
gtagcctgaggaatgataaaccctccctcttacatctttttacaactgca
cgtaggtcatcagtctcgtcctccctccctccctccctccctcagAAAAC
AGGGGGTTTTGCCGCTGAAGTAGTGGCTGAGATGCAAGAGCGATGTTTTC
TTTTTTTGGAGGCTCCGGTGCAGCGTGTGTGCGGGTACGACACGCCTTTC
CCTTTGGTGTTCGAAAAGgtggggagggagggagggtggtagggagggag
ggagggagggagggagggaggagggagggggggagggtccggtgcggcgt
gtgtgcgggtacgatacacctttcctattcgaataggtggggagggaggg
agggagggagggagggagggagggagggagggagggagggagcgagggaa
ggagaggctgcagcaagtgatgggtttcaattcaaagcttgaggtgggct
gatctatcttccttcgcttccctccctccctccctccctccctccctcag
TACTACGTTCCGGACGCTTACAAAAACCTGGAGGCGATCAAGAAGGCAGT
TCACTTCTGACAGCCGGGGGAAGGGAGGGAGGGGGGAGGGAGGAAGGTGT
TTTTACTGTATGTTGTGTATATAAAATTATCAGGCGAATGACGAGAGGGC
GTGACGGAATAGGGG
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protein sequence of NO13G00610.1

>NO13G00610.1-protein ID=NO13G00610.1-protein|Name=NO13G00610.1|organism=Nannochloropsis oceanica|type=polypeptide|length=368bp
MQGIAFLSTVAGTARAPGRLRRRLLSSSLRTTTRSYTPAAGVMTKRMNLF
TAINDALRTAMDTDQSAIIFGEDVAFGGVFRCTVGLREDFGDGRVFNTPL
CEQGIAGFGIGYASLGKTAIAEIQFADYIFPAFDQLVNEAAKFRYRSGNQ
FNCGGLTVRAPCGAVGHGGHYHSQSPEAYFTHTPGLKVVMPRSPAEAKGL
LLSSIRAPDPVIFLEPKALYRAAVEEVPEGDYTIPLGRADVLREGRDVTV
VGWGGQLRVLEKACDLAADEGIACELIDLRTLLPWDADTVMASVHKTGRL
VVSHEAPKTGGFAAEVVAEMQERCFLFLEAPVQRVCGYDTPFPLVFEKYY
VPDAYKNLEAIKKAVHF*
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