NO12G01990, NO12G01990 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO12G01990
Unique Name	NO12G01990
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4980
Alignment location	chr12:561714..566693 +

Link to JBrowse

Properties


Property Name	Value
Description	Cohesin subunit sa-1

Mutants

Expression

Analysis:

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr12	genome	chr12:561714..566693 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

Vocabulary: **INTERPRO**
Term	Definition
IPR016024	ARM-type_fold
IPR020839	SCD
IPR013721	STAG

Homology

[Close]

BLAST of NO12G01990 vs. NCBI_GenBank
Match: EWM25790.1 (cohesin subunit sa-1 [Nannochloropsis gaditana])

HSP 1 Score: 1471.4 bits (3808), Expect = 0.000e+0
Identity = 937/1693 (55.35%), Postives = 1078/1693 (63.67%), Query Frame = 0

Query:    1 MAPAVRRSGRASVKPDNVYEDALREAAEKVTKQRKTTRPQVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPIDPYSSDEETSDEEGLDRLLTEGAAAXXXXXXXXXXXXXXXXXXXXXXXXNLKEGKHSLLFESLVRNLPVEKRMREWVRAYEMEE----EDDDEMGGTSLVDIFNFLVWSAGAKKSYVNREAEVLPELDSEEWEALVDGMVQDLREGGMAAYPLLEGAKFKGFRGRFAEAWEQLVKASRDGNGHKIEAVRSVIDLVRALCEVPLVSVRHTAAYAGLRLGNALVQETLALSKKVEVASRQLEAEQRKGAGRSRKALDLNKAIEEQTGHQGALEAVLEEIFNGVFASRYRDVNEKVRADCMEGLGFFLETYPSMFLRDQFVKYLGWMLYDKAGAVRAAAAGVLLRLYSKKAYLAQLENFTSRFLKRLEDLVHDVDEGVKRTAVQVLRLLQGAGYLDEASHELLDEVDELLLDPHWDVRTREQAMLFFTDHVDGFNDLSGVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRLVTVVQFLDYHLGEGEQWVPEHEQLVAACVEAFERHPEGDFLYDWPTYFQLLRESQRAAAS----SSPAVAGLSDHEQSLLIRLLGASVKRAASHAELTFTSGCNSIATTGAGKKAGIETAGSG-PAEMRAFRERKQKLEAALEAFTSGAVEDLPQVLSQFQTDARKMAGLVGLPQYFQAATIANKRNKGHFEALLKLLRDVYLKATDAAVLQDVARSFAHLLQRDQEAGGRLHNVGAILQIIVAELCRRLEALNIDGSCSGSSNKENKCGRGDVSSSGKKDADFSASLVLLQLGTLGKQIDLADYIGGDGEGGKLGALAARVQEVVMFRLQEEQTWGGGEERLQLTVRVVREGTYLLYILLLHSTLGLIRLAQEQKPLTKRMD----KKKAVATKGGRNRKAGEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANAVVAQRTILLEVLSAVLRLDGSSIV---PDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKGKVSATVVAAMEELKKTAYAVVSDLRFLFRPLCARYQVLHRIVWTPEPDFLRLLQFFFQKEEARFEEAAVLEAEGGGEGDAAAADEVLRRDLLDPLIRSVLYTTESINRRQAAAIAAHFVDSGRQSTESVRFFMKQLKDLDMKLYLEVQMTTLRSCYHKWCQT---------GSEVEDXXXXXXXXXXGLEKITRLGVRMAQTMGVGRLKAETPAADSFVRFLKSGVAFALEDAPKNFTFLDALRCYMPKLPENRMHEVAHLFREKTAALPQVVKEQVEHERQLVAAEAEDADHTDEGIAYLNFYYELYGHFGVAVAGMGAGAALKRASTTPSKLKRGVASPRITGSTVQKRRGLAGS--SSRKEGETGGKMVSSFSSGDRRHRHGTSAAAEESELGND-TGDDEEDSIHSSGDEK-------GRDSFLSGEKEVSSILLTGHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGSLSQRSQR--RSGXXXXXXXXXXXXXXXXXSQAEEAEMEGRSATGGFESDSETSIFGELVLSKAVRGCAGGNMGKGSKR 1657
            M   +RRSGR SV+PD+VYEDALREAA K  ++    R Q                                                                        +PI  YS+D+ETSDE+ LD+++ E                            NL+EGK SLLFE L R LP+EKRM++WV AYE EE    +D D M  +SLVD+FNFL+WS+GA K+YV R+ E LP LDSEEWE +++G+VQD+R GG+ +YPLLEGA+FKGFRGRFAEAWE LVKA R+GN HK+E V +VIDLVRALCEVPLVS+RHTAAYAGLRLGNALVQ+TLALSKKVEVASRQLEAEQ KG  RSRKALDLN AI + T HQ ALEAVLEEIFNGVFASRYRDV+E+VRADCM+GLGFFL+TYPSMFLRDQFVKYLGWMLYDKA  VRAAAAGVLLRLYSK  YL+QLENFT+RFLKRLEDLVHDVDEGVKRTA+QVLRLLQGAGYLDEAS ELLDEVDELLLDP WDVRTREQAMLFFTDHVDGFN+L+  E                                                        KRLVTVVQFLDYHLGE E+W PEHE+LVAACVEAFERHP+GDFLYDWPTYF LL +   A++S    S+     LSDHEQSLLIR+LGASVKRA S A  +   G NS     A  + G   +GS  PA+MR  R R Q LEAA+EAFTSGAVEDLP+VLS+FQTD  KMAGLVGLPQY QA+ IANKRN+GHFEALLKLLR  YLKATD AVLQD+ARS +HLLQRD+E  GRLHNVGA+L  IVAEL RRL A  ++ +  G+  KENK  R     +G +D DFS  LVLLQLGTL KQID+ DY+ G+ E G+L  + + VQ+V++ RL+E Q W G  E LQL VRVVREG YLLY++LLHST GLI LAQ ++P  K+++      K   +  G   K GE                               ANA++AQR  LL  LSAVL L+  S      +G                                 + +    ++ A+E LKK AY +VSDLRFLFRPLC+RYQ+L R+ WTPEPDFLRLLQ FFQ EEAR+EEA       G E D  AADE+LRRDLLDPLIRSVLYTTESINRRQAAAIAAHFVDSGR+STESVRF MKQLKDLD+KLYLEVQMTTLRSC+HKW Q          G   ED           +EKI RLG RMAQT+GVGR+K ETPAADSFVRF+KSG+AFAL++APKNFTFLD LRCYMPKLPE+R  EV  LFRE+TA LP+ VK QVEHERQL+AAE E+ D T +GIAYLNFY+ELYGHFG A A + +GA + R S TPSK K G   P    ++ +KR GL  S     K G        SF  GD + R    A  EE  L +     DEE+SI S  D K         +S   G + + SI     +                 XXXXXXXXXXXXXXX        XXXXXXXXXXXXXX G +S R  +  R G                    EEA +EGR  + G +SDSETSIFGEL LSKA     G   GK  KR
Sbjct:   52 MVAELRRSGRVSVRPDSVYEDALREAAGKKARRPLALRLQ------------EPVESSPGGQISHEWQERSKERMTIGKNEKANGSSKRKRSSLKRATETDVESSRETLAKKEPI-TYSTDDETSDEDDLDKIMGE------KNRRKHRRDAGMRKGAGGRGLANLREGKCSLLFECLARELPIEKRMKDWVVAYEKEEDERGDDADGMMSSSLVDMFNFLLWSSGATKTYVKRDRETLPMLDSEEWETMINGIVQDMRAGGVLSYPLLEGARFKGFRGRFAEAWELLVKAVREGNAHKLEPVHAVIDLVRALCEVPLVSIRHTAAYAGLRLGNALVQQTLALSKKVEVASRQLEAEQHKGGARSRKALDLNSAIMDLTSHQTALEAVLEEIFNGVFASRYRDVSERVRADCMDGLGFFLDTYPSMFLRDQFVKYLGWMLYDKASTVRAAAAGVLLRLYSKPVYLSQLENFTARFLKRLEDLVHDVDEGVKRTAIQVLRLLQGAGYLDEASQELLDEVDELLLDPAWDVRTREQAMLFFTDHVDGFNELTDGEDEESRQGEKEIDEGASSGGSPEKEKSKETVPVVKTKQQLRRDSTGRQGGARRRGVIKRLVTVVQFLDYHLGERERWAPEHEELVAACVEAFERHPDGDFLYDWPTYFHLLGDESAASSSLRAGSTSTDMRLSDHEQSLLIRVLGASVKRATSFA--SPKQGNNS-----AASERGRNFSGSAKPADMREARHRGQVLEAAVEAFTSGAVEDLPKVLSRFQTDPGKMAGLVGLPQYLQASAIANKRNRGHFEALLKLLRGTYLKATDGAVLQDIARSLSHLLQRDEEECGRLHNVGAVLYSIVAELLRRLGA--VETARDGAGTKENKRRR----RAGCEDTDFSTGLVLLQLGTLAKQIDITDYL-GENEDGRLLEVTSCVQKVLLARLREVQNWTGSTEHLQLVVRVVREGLYLLYVVLLHSTRGLIFLAQAKRPANKKLEAMDNSHKHGPSHFGEIEKKGES-----DKDDVMLDLIESSDCDNIDNVGEKEANAILAQRNTLLGALSAVLSLNRPSCSNENGEGSEDKAELEGTDNNKSHNGCRSGNAFSAHTVRTRENESFRAIIDAIEALKKAAYVLVSDLRFLFRPLCSRYQILCRVAWTPEPDFLRLLQTFFQTEEARYEEAVATAKAQGSEEDLQAADEILRRDLLDPLIRSVLYTTESINRRQAAAIAAHFVDSGRESTESVRFLMKQLKDLDVKLYLEVQMTTLRSCFHKWFQKPIEERALGGGEADEDYEVADAAAAAAMEKILRLGTRMAQTLGVGRVKDETPAADSFVRFIKSGIAFALDEAPKNFTFLDVLRCYMPKLPESRTREVVQLFRERTAKLPEPVKRQVEHERQLIAAEEEEVDLTQDGIAYLNFYHELYGHFGGAGA-LASGAPI-RTSRTPSKDKDGNDHPHALSTSSKKRLGLPTSCVGQTKNGTNRMNHPISF-PGDLKRR----ARVEEGCLASGAVSIDEEESIRSFEDGKEVGLSSCHEESDGDGNRMLQSIEACSRM--------------GGRXXXXXXXXXXXXXXXPSVHEMQDXXXXXXXXXXXXXXXGMVSWRESKATRGGEQSHRRRGTRKRGRISSQAEEEAAIEGRGDSRGIDSDSETSIFGELTLSKA----CGKGAGKTEKR 1681

[Close]

BLAST of NO12G01990 vs. NCBI_GenBank
Match: OWZ13407.1 (hypothetical protein PHMEG_00013273 [Phytophthora megakarya])

HSP 1 Score: 192.2 bits (487), Expect = 1.300e-44
Identity = 295/1242 (23.75%), Postives = 487/1242 (39.21%), Query Frame = 0

Query:  174 LFESL-VRNLPVEKRMREWVRAYEMEEEDDDEMGGTSLVDIFNFLVWSAGAKKSYVNREAEVLPELDSEEWEALVDGMVQDLREGGMAAYPLL-EGAKFKGFRGRFAEAWEQLVKASRDGN-GHKIEAVRSVIDLVRALCEVPLVSVRHTAAYAGLRLGNALVQETLALSKKVEVASRQLEAEQRKGAGR--SRKALDLNKAI---EEQTGHQGALEAV---LEEIFNGVFASRYRDVNEKVRADCMEGLGFFLETYPSMFLRDQFVKYLGWMLYDKAGAVRAAAAGVLLRLYSKKAYLAQLENFTSRFLKRLEDLVHDVDEGVKRTAVQVLRLLQGAGYLDEASHEL-LDEVDELLLD-PHWDVRTREQAMLFFTDHVDGFNDLSGVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRLVTVVQFLDYHLGEGEQWVPEH---EQLVAACVEAFERHPEGDFLYDWPTYFQLLRESQRAAASSSPAVAGLSDHEQSLLIRLLGASVKRAASHAELTFTSGCNSIATTGAGKKAGIETAGSGPAEMRAFRERKQKLEAALEAFTSGAVEDLPQVLSQFQTDARKMAGLVGLPQYFQAATIANKRNKGHFEALLKLLRDVYLKATDAAVLQDVARSFAHLLQRDQEAGGRLHN--VGAILQIIVAELCRRLE-------ALNIDGSCSGSSNKENKCGRGDVSSSGKK--DADFSASLVLLQLGTLGKQIDLADYIGGDGEGGKLGALAARVQEVVMFRLQEEQT-WGGGEERLQLTVRVVREGTYLLYILLLHSTLGLIRLAQEQKPLTKRMDKKKAVATKGGRNRKAGEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANAVVAQRTILLEVLSAVL--RLDGSSIVPDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKGKVSATVVAAMEELKKTAYAVVSDLRFLFRPLCARYQVLHRIVWTPEPDFLRLL-------QFFFQKEEARFEEAAVLEAEGGGEGDAAAADEVLRRDLLDPLIRSVLYTTESIN---RRQAAAIAAHFVDSGRQSTESVRFFMKQLKDLDMKLYLEVQMTTLRSCYHK----WCQTGSEVE-DXXXXXXXXXXGL-----------EKITRLGVRMAQTMGVGRLKAETPAADSFVRFLKSGVAFALEDAPKNFTFLDALRCYMPKLPENRMHEVAHLFREKTAAL 1360
            LFE++  R  P+E  + EW   +E + E        +  ++ N ++ + G     V  E+E L +LD      L+D +V+DL E     YP++  G   K F+  F E WE LVK   +       E   + ID +  L    L  +RHT+  A L L N+LV+   ++S+++ +A+RQL AE         SRK+ ++ K     E +  ++  L+ +   +  +F GV   RYRDV  ++R   M+ LG ++ T P  FL+D F+KYLGW+L DK+ +VR     +L  LY  +++  ++E FTSRFL R  +L  DVD GV     + + LL     L   S ++ L  V++L+ D  H D+  R+ A  F     D F                                                                + + +V+F        E+++  H   E  V   V+AF    +   L DW +   LL      A  S+P    LS+ +Q++L+RLL ASV +              S +  GA   A                  K++ E   E  T    +D+P++   +Q D+ K+A L+ L       +     + G  + LL+ L+  YL  +   +L  +  S AHL+Q +  +  R     V  ++Q ++ ++   LE       AL I    +  +  +NK GR   S+  K+  D ++   + L +L  L K +++ D++  D E  ++    A   E+   R+    T  G    R   +V  + EG   +  +    T+    L     P+ K ++  K        N  A  D                                 V   R+ L E L +VL   L  ++ + D                                         + + + + ++ A+    D+R LF          +  +    P+ L LL       +    ++E  FE+  +       E  + A  E   +      +   L      N   +R AA++  +   + + S E V+ F K++K      YLE+QM  LR  ++     W Q    VE D           L           +K+  L  R +Q++GVG  K  +     F+RFL  GV FALE  P  F FL A+R Y+P++  + M ++   F E+   L
Sbjct:  126 LFEAIKSRKTPLENLLSEWRERFEEDNE-------KATREVLNLVLLACGGTSPCV-PESEPLAQLDM-NMSHLMDHVVEDL-ENANGEYPIMSRGRGTKKFQRNFEEFWEVLVKECYESEILFTSEIANTFIDWLTTLSSSELRPIRHTSTVAILALSNSLVRTAASISEQLAIATRQLNAETNSPGTTPGSRKSPNIRKVALLKENKVLYESRLQQIWKLVNSVFTGVVVHRYRDVMPEIRVVTMQCLGHWITTLPDRFLKDNFLKYLGWLLSDKSASVRIEVVEILCELYGNESFKQRMELFTSRFLSRYLELCTDVDVGV---VEECIHLLIAVDKLSLISADIGLQPVEKLVFDAEHEDI--RKAAAEFVCLQYDAFG---------------------------------------------VAVSKTKDTQLKKEQLNTQAIALVEF-------AEEYIQNHGIPEDAVETLVDAFWGLDDCLVLQDWRSMTDLL-----LADKSAP---DLSNEQQTILLRLLVASVSKLV-----------GSTSNRGASAAA------------------KRESERLREEVTVAYCKDIPRLFQLYQADSDKLALLLQLIPMLTLKSEVIGHHSGLIKELLEKLKHAYLLHSGEELLTSLTLSIAHLVQTEHASLKREAEIIVHELVQDVIDKINHLLEADVKLYDALAIARHETSKTKGKNKRGRKTKSAKSKEISDVEYDLRIGLCRLKCLVKYLNIRDHLPPDLESSRVD--VADHPEMQQGRMDNLVTAMGELLHRRSKSVSELHEGFRHVDTIKHVLTIVYSDLLWITAPIFKGIEDDKRSVGATSENADAEVD------------------------RYVSIQIQKVCRSRSTLEEALVSVLEMHLVRTNQITDEEHKESEKIPDLPSVNSMEPIQFE--------------DEDLTSYVRDAQRFAFLTFCDVRCLFVEKFQDANPPYNALKWELPNVLVLLTHTHFDSEMDDAEQEPEFEDDMMENDPVIAEAKSKAISEWHEKQQQKAALLVALGRVSLCNPSKKRPAASVMEYLTSNDQASVEVVKAFGKKVKADAPVRYLEIQMIALRELFNNQILFWKQEIEAVEADEDNMDDEIAEQLAELKEKVQNNDQKLKELAKRFSQSLGVG--KVPSSLRGPFLRFLCEGVRFALEQ-PNQFEFLQAMRPYLPRMDPSSMVQLHEYFMERLQVL 1220

[Close]

BLAST of NO12G01990 vs. NCBI_GenBank
Match: GAY00543.1 (Hypothetical protein PINS_008394, partial [Pythium insidiosum])

HSP 1 Score: 181.4 bits (459), Expect = 2.300e-41
Identity = 295/1250 (23.60%), Postives = 486/1250 (38.88%), Query Frame = 0

Query:  175 FESLVR-NLPVEKRMREWVRAYEMEEEDDDEMGGTSLVDIFNFLVWSAGAKKSYVNREAEVLPELDSEEWEALVDGMVQDLREGGMAAYPLLEGAK-FKGFRGRFAEAWEQLVKASRDGN-GHKIEAVRSVIDLVRALCEVPLVSVRHTAAYAGLRLGNALVQETLALSKKVEVASRQLEAE--------QRKGAGRSRKALDLNKAIEEQTGHQGALEAVLEEIFNGVFASRYRDVNEKVRADCMEGLGFFLETYPSMFLRDQFVKYLGWMLYDKAGAVRAAAAGVLLRLYSKKAYLAQLENFTSRFLKRLEDLVHDVDEGVKRTAVQVLRLLQGAGYLDEASHELLDEVDELL-LDPHWDVRTREQAMLFFTDHVDGFNDLSGVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRLVTVVQFLDYHLGEGEQWVPEH---EQLVAACVEAFERHPEGDFLYDWPTYFQLLRESQRAAASSSPAVAGLSDHEQSLLIRLLGASVKRAASHAELTFTSGCNSIATTGAGKKAGIETAGSGPAEMRAFRERKQKLEAALEAFTSGAVEDLPQVLSQFQTDARKMAGLVGLPQYFQAATIANKRNKGHFEALLKLLRDVYLKATDAAVLQDVARSFAHLLQRDQEAGGRLHNVGAILQIIVAELCRRLEALNIDGS---------CSGSSNKENKCGRGDVSSSGKKDADFSASLVLLQLGTLGKQIDLADYIG------GDGEGGKLGALAARVQEVVMFRLQEEQTWGGGEER-----LQLTVRVVREGTYLLYILLLHSTLGLIRLAQEQKPLTKRMDKKKAVATKGGRNRKAGEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANAVVAQRTILLEVLSAVLRLDGSSIVPDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKGKVSATVVAAMEELKKTAYAVVSDLRFLFRPLCARYQ----VLHRIVWTPEPDFLRLLQFFFQKEEARFEEAAVLEAEGGGEGDAAAADEVLRRDLLDPLIRSVLYTT-------ESINRRQAAAIAAHFVDSGRQSTESVRFFMKQLKDLDMKLYLEVQMTTLRSCYHKWCQTGSEVEDXXXXXXXXXXGLEKITR-------LGVRMAQTMGVGRLKAETPAADSFVRFLKSGVAFALEDAPKNFTFLDALRCYMPKLPENRMHEVAHLFREKTAALPQVVKEQVEHER 1372
            FE++ R N  +   + EW   +E       E   +   ++ NF++ + G +   V   +E L +LD  +   LVD +V DL + G   YPL    + FK F   F + W+  VK   +       E V   +D +  L    + ++RHT   A   LG+A+V     + K++ V  RQ+ AE         RK  G S+K   L +        +  L  +++ +FNGV   RYRDV   +R + +  LG ++   P  FL+D ++KYLGW+L DK  +VR     +L  LY  + +  +LE FTSRFL R  +L +DVDE V +  +++L  +     +  +S   L  V++L+ ++ + D+  R+ A  F     D F                                                                + + +V+F        E++V  H    + V   V+AF    +   L DW     LL   + A          L+  +Q+LLIRLL ASV                       GK   ++ A  G A   A R+R+ K             + +P +L +FQ+D+ K++ LV L      +T          ++LL+ L++ ++  ++  +L+ +A S  HL + + E   R  +V  I+  I  EL  +LE L  D +              N+     + D++     D++F+  + L +L  L    +  ++              + G+ + R+ EV        Q       R      +L   +++  T    +L+L+S +    L Q      K       V      N ++                                    ++  R++L E L  +L +           XXXXXXXXXXXX                          V   ++E ++ A+    D R LF     R+Q       ++ W      + L Q FF+ E         +E+ GG + +   + E  + D ++   R+ L             N+RQAAA+  +  D G    + V+ F KQLK      +LE+QMT LR  Y        E E+            E I         +  + +Q++GVG++ +   A   F RFL  GV F+LE     F+FLDALR Y+  L ++   ++ + F   T  L  V + Q + ER
Sbjct:  136 FEAVKRGNCSMTDLVIEWRERFE-------ENNASGAREVLNFVLQACGGQGECVPL-SEPLEKLDMSD---LVDYVVGDLEQSG-DGYPLASRQRAFKKFYISFVDFWDAFVKECYESELLFTTEIVTQFVDWLTTLSSAEIRAIRHTTTVAAYALGSAMVDCIGTIEKQLGVVERQINAETTSKKKSPARKSPGSSKKLQQLQENRSMYEDRRERLLGMIQLLFNGVVVHRYRDVMADIRLESIRTLGNWIMALPDQFLKDNYMKYLGWVLNDKDASVRLGVVEILRELYENEEFAVKLELFTSRFLPRYLELCNDVDESVVQACIKLLIAVDKRSLI--SSDVELHFVEKLVFVEDNEDI--RKAAAEFVCLQYDAFG----------------------------------------------VAESNRQSQLSREQLNTQAIALVEF-------AEEYVTNHGVPAEAVETMVDAFWGLDDCQVLQDWKVLLNLLLMDKNA--------PDLTSEQQTLLIRLLLASV-----------------------GKIVSVD-ADKGSA---ASRKRQTK-------------DKIPNLLVRFQSDSEKLSLLVELIPLLTLSTEVAGLQPASVKSLLEKLKNAFMVNSEERLLKPLALSIHHLRKSEHEVIKRESDV--IVHEIYQELLDKLEELLADDARIEIEAPTVADLPKNRRRSSKKKDIA-----DSEFAVRITLARLACLITHFNAREFAASTKLTPSSSPSDQDGSDSHRLTEVKSQMESVAQNLSKFLHRRSKNVAELNQALLQVDTIRFALLVLYSDV----LWQTNAVFRKFSTPNAQVVDASSENPES--------------------------------LIQDIIVSRSLLEESLIGILEMHLKKTEMRNDEXXXXXXXXXXXXIAMEEIEFE--------------DLHVANYVKEAQRVAFITFCDARCLF---VERFQDAVAPFDKLEWNLPRVLVILTQMFFENE---------MESGGGDQPEEETSQEAEQTDGMNARRRAELLLAMGRVAHCNPTNKRQAAAVLRYLADPGHTVADVVKVFSKQLKSDAPVRFLEIQMTALRQLYSTILGMKEEAEETTDDEATLEELQESIASSEIELRDVAKKFSQSLGVGKVPSSLRA--PFFRFLCEGVRFSLE-RQMQFSFLDALRPYLSHLDKSSTKQLNNYF---TQTLASVEESQPDAER 1193

[Close]

BLAST of NO12G01990 vs. NCBI_GenBank
Match: ETI41970.1 (hypothetical protein, variant 2 [Phytophthora parasitica P1569])

HSP 1 Score: 172.6 bits (436), Expect = 1.100e-38
Identity = 204/834 (24.46%), Postives = 339/834 (40.65%), Query Frame = 0

Query:  184 VEKRMREWVRAYEMEEEDDDEMGGTSLVDIFNFLVWSAGAKKSYVNREAEVLPELDSEEWEALVDGMVQDLREGGMAAYPLL-EGAKFKGFRGRFAEAWEQLVKASRDGN-GHKIEAVRSVIDLVRALCEVPLVSVRHTAAYAGLRLGNALVQETLALSKKVEVASRQLEAEQRK-----GAGRSRKALDLNKAIEEQTGHQGALEAVLE---EIFNGVFASRYRDVNEKVRADCMEGLGFFLETYPSMFLRDQFVKYLGWMLYDKAGAVRAAAAGVLLRLYSKKAYLAQLENFTSRFLKRLEDLVHDVDEGVKRTAVQVLRLLQGAGYLDEASHELLDEVDELLLD-PHWDVRTREQAMLFFTDHVDGFNDLSGVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRLVTVVQFLDYHLGEGEQWVPEHEQLVAACVEAFERHPEGDFLYDWPTYFQLLRESQRAAASSSPAVAGLSDHEQSLLIRLLGASVKRAASHAELTFTSGCNSIATTGAGKKAGIETAGSGPAEMRAFRERKQKLEAALEAFTSGAVEDLPQVLSQFQTDARKMAGLVGLPQYFQAATIANKRNKGHFEALLKLLRDVYLKATDAAVLQDVARSFAHLLQRDQEAGGRLHNV--GAILQIIVAELCRRLE---------ALNIDGSCSGSSNKENKCGRGDVSSSGKKDADFSASLVLLQLGTLGKQIDLADY---------IGGDG-------EGGKLGALAARVQEVVMFRLQEEQTWGGGEERLQLTVRVVREGTYLLYILLLHSTLGLIRLAQEQK 980
            +E  M EW   +    EDDDE    +  ++ N ++ + G     V  E+E L +LD  +   +VD +V+DL E     YPL+  G   + F+ +F E WE  VK   +       E   + ID +  L    L  +RHTA  A L   N+LV+    +SK++ +A RQL AE        GA +S  A  +    + +  ++  L+ VL+    +F GV   RYRDV  ++R   ++ LG ++ T P  FL+D F+KYLGW+L DK+ +VR     +L  LY   ++  +LE FT+RFL R  +L +DVDE V    + +L  +     +  +S   L  V+ L+ D  H D+  R+ A  F     D F                                                                + + +V+F + ++      VP  E  V   V+AF    +   L  W     LL   + A          LS  +Q++L+RLL AS+++           G N  A   A                      K++ E   E  T    +D+P +   +Q D+ K+A L+ L       +     + G  + LL+ L+  YL  +D  +L  ++ S  HLLQ +  +  R   V    ++Q+I+ +  R LE         A+  D +    S+K     +    +    D ++   + L ++  L K +++ +Y         + GDG       + G++  L A V ++    L            +   V  ++ G  ++Y  LL +T  + +  +E K
Sbjct:  124 LENLMSEWRDRF----EDDDE---KATREVLNLVLQACGGTGKCV-PESEPLAQLDMGD---MVDHVVEDL-EKANGEYPLMSRGRGMRKFQRKFEEFWEVFVKECYESEILFTSEIANNFIDWLTTLSSSELRPIRHTATVAVLAFSNSLVRTAANISKQLAIAMRQLNAEMNSPGSTPGAVKSPNARKVALLKDNRALYENRLQQVLKLVNLVFTGVVVHRYRDVMPEIRVVAIQCLGHWITTLPDQFLKDSFLKYLGWLLSDKSASVRLEVVEILCELYENDSFTEKLELFTARFLPRYLELCNDVDESVVEVCIHLLIAVDKHNLI--SSDVELQPVERLVFDAEHEDI--RKAAAEFVCIQYDAFG---------------------------------------------VAVSKTKNATLKKEQLNTQAIALVEFAEEYI--QNYGVP--EDAVETLVDAFWGLEDCLVLQSWRVMTDLLLVDKTA--------PDLSSEQQTILLRLLVASIRKLVG-------DGVNRSARAAA----------------------KRESEQLQEEITVAYCKDIPSLFLLYQADSDKLALLLELIPTLTLKSEVIGHHSGQVKDLLEKLKHAYLLHSDEELLTSLSLSITHLLQTEHASLKREAEVIMHELIQVIMDKTDRLLEADRKLFGEFAIAADDTPKTRSSKTKGRNKKSAKTKEISDVEYGLRVSLCRIKCLAKYLNIREYLPSDLSLSKVDGDGHTTATDLQQGRMDILVAAVGDL----LHRRTLLASELHEVFRHVDAIKHGMTIIYFDLLWNTAPIFKNVEEHK 851

[Close]

BLAST of NO12G01990 vs. NCBI_GenBank
Match: XP_002904221.1 (cohesin subunit, putative [Phytophthora infestans T30-4] >EEY54399.1 cohesin subunit, putative [Phytophthora infestans T30-4])

HSP 1 Score: 170.6 bits (431), Expect = 4.000e-38
Identity = 344/1416 (24.29%), Postives = 548/1416 (38.70%), Query Frame = 0

Query:  165 NLKEGKHSLLFESLVR-NLPVEKRMREWVRAYEMEEEDDDEMGGTSLVDIFNFLVWSAGAKKSYVNREAEVLPELDSEEWEALVDGMVQDLREGGMAAYPLL-EGAKFKGFRGRFAEAWEQLVKASRDGN-GHKIEAVRSVIDLVRALCEVPLVSVRHTAAYAGLRLGNALVQETLALSKKVEVASRQLEAEQRK-----GAGRSRKALDLNKAIEEQTGHQGALEAVLE---EIFNGVFASRYRDVNEKVRADCMEGLGFFLETYPSMFLRDQFVKYLGWMLYDKAGAVRAAAAGVLLRLYSKKAYLAQLENFTSRFLKRLEDLVHDVDEGVKRTAVQVLRLLQGAGYLDEASHELLDEVDELLLD-PHWDVRTREQAMLFFTDHVDGFNDLSGVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRLVTVVQFLDYHLGEGEQWVPEHEQLVAACVEAFERHPEGDFLYDWPTYFQLLRESQRAAASSSPAVAGLSDHEQSLLIRLLGASVKRAASHAELTFTSGCNSIATTGAGKKAGIETAGSGPAEMRAFRERKQKLEAALEAFTSGAVEDLPQVLSQFQTDARKMAGLVGLPQYFQAATIANKRNKGHFEALLKLLRDVYLKATDAAVLQDVARSFAHLLQRDQEAGGRLHNVGAILQIIVAELC----RRLEA----LNIDGSCSGSSNKENKCGRGDVSSSGK-----KDADFSASLVLLQLGTLGKQIDLADYIGG----------------DGEGGKLGALAARVQEVVMFRLQEEQTWGGGEERLQLTVRVVREGTYLLYILLLHSTLGLIRLAQEQKPLTKRMDKKKAVATKGGRNRKAGEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANAVVAQRTILLEVLSAVL--RLDGSSIVPDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKGKVSATVVAAMEELKKTAYAVVSDLRFL----FRPLCARYQVLHRIVWTPEPDFLRLLQFFFQK-------EEARFEEAAVLEAEGGGEGDAAAADE-----VLRRDLLDPLIRSVLYTTESINRRQAAAIAAHFVDSGRQSTESVRFFMKQLKDLDMKLYLEVQMTTLRSCYH---------KWCQTGSEV-EDXXXXXXXXXXGLE----KITRLGVRMAQTMGVGRLKAETPAADSFVRFLKSGVAFALEDAPKNFTFLDALRCYMPKLPENRMHEVAHLFREKTAALPQVVKEQVEHERQLVAAEAEDADHTDEGIAYLNFYYELYGHFGVAVAGMGAGAALKRAST-----TPSKLKRGVASPRITGSTVQKRRGLAGSSSRKEGETGGKMVSSFSSGDRRHRHGTSAAAEESELGNDTGDDEEDSIHSSGDEK 1503
            N +E   S LF+++    + +E  + EW   +    E+DDE     ++++      + G +   V  E+E L +L+  +   LV+ + + L E     YPL+  G   K F+  F E WE  VK   +       E   + ID +  L    L  +RHT   A L L N+LV+   ++S+++ +A+RQL AE        GAG+S     +    + +   +  L+ VL+    IF GV   RYRDV  ++R   M+ LG ++ T P  FL+D F+KYLGW+L D++ AVR     +L  LY   A+  +LE FT+RFL R  +L  DVD+GV   A+ +L  +     +  +S   L  V++L+ D  H D+  R+ A  F     D F                                                                + + +V+F + ++      VP  E  V   V+AF    +   L +W     LL   + A          LS  +Q++L+RLL ASV++                          ++ + +  A   A RE +Q  E    A+     +D+P +   +Q D+ K+A L+ L       +     +    + LL+ L+  YL  ++  +L  ++ S  HLL+ +  +  R     A++Q +V E+     R LEA     +     SG + K                    D ++   + L ++  L K +++ +Y+                  D   G++  L   V +++  R +       G       V  ++     +Y  LL +T  + +  +E          K+ + +          D                                 V   R+ L E L +VL   L  +  V D   XXXXXXXXXXXXXXXXX                     VV+ ++E ++ A+    D+R L    F+     Y  L    W        L Q  F+        EE  FE+  V       E  A A  E       R +LL  L R  L       + QAAA+   F  SG+ S E V+ F KQ+K      YLE+QM  LR  Y          ++ QT  E  +D           +E    ++  L  R +Q++GVG++     A   F+RFL+ GV +ALE  P  F FL+A+R Y+ +L    M ++   F ++   L         H+   V  ++ED D     +            F    A     AA KR ST      P + KR  AS   T         + G+S  +E E  G+ V    +             E ++ G++   D  +   SSG ++
Sbjct:  100 NEQEHGVSSLFDAVKNGKVSLENLLSEWRDRF----EEDDENATREVLNL------ACGGRGQCV-PESEPLAQLNMAD---LVNHVEKGL-EKANGEYPLMSRGKGKKKFQRHFDEFWEFFVKECYESEILFTSEIANNFIDWLTTLSSSELRPIRHTTTVAVLALSNSLVRTAASISEQLAIATRQLNAEMNSPASTPGAGKSPNIRKVALLKDNRAVCENRLQQVLKLVNLIFTGVVVHRYRDVMPEIRVATMQCLGHWITTLPDQFLKDSFLKYLGWLLSDRSAAVRFEVVEILCELYENDAFTEKLELFTARFLSRYLELCSDVDDGVVEEAIHLLIAVDKHSLI--SSDIELQPVEKLVFDAEHEDI--RKAAAEFVCIQYDAFG---------------------------------------------VAVSKTKNATLKKEQLNTQAIALVEFAEEYI--QNYGVP--EDAVETLVDAFWGLEDCLVLQEWRVMTDLLLVDKTA--------PDLSSEQQTILLRLLVASVRKL-------------------------VDVSANRSASAAAKRESEQLQEEITVAY----CKDIPSLFLLYQADSDKLALLLELIPMLTLRSEVIGHHSSQMKELLEKLKHAYLLHSNEELLTSLSLSITHLLKTEHASLKR--EAEALMQELVQEIMDKTDRLLEADIKLFDDSAIASGDTPKARXXXXXXXXXXXXXXXXISDVEYGLRISLCRIKCLAKYLNIREYLASDLSLPMVNRDDQITVPDSHQGRMDKLVVAVGDLLHRRTKSASELDEGFR----NVDTIKHSLATIYFDLLWTTAPIFKSIEEY--------AKQNIPSNAASEYTEAVD------------------------PAVQSQIQKVCQSRSTLEEALISVLEMHLARTKEVMDEEHXXXXXXXXXXXXXXXXXIVFE--------------DEDVVSYVKEAQRFAFLTFCDIRCLFVEKFQDATPPYDALE---WALPNVLRHLTQMHFESEMDDAEDEEPEFEDDVVKNDPEVAEEKANALREWQEKQQRRAELLVALGRVALCNPN--KKYQAAAVLQCFTSSGKSSVEVVKAFGKQVKTDAPVRYLEIQMAALRQLYSSILIGKQDIEFAQTSEEKNDDDIAEQEAVKEKVESSELELKELAKRFSQSLGVGKVPLSLRA--PFLRFLREGVRYALEQ-PAQFEFLEAMRVYVSRLDNTSMAQLREYFMDRLETL---------HD---VPGDSEDLDSRWRAV------------FDFQTAITSTVAAGKRNSTGAMLSPPLRNKRRSASSEPT--------PMQGTSIAEEDE--GENVERVDNAGEETESAAGDQTEANKAGHEEQIDHNNRHTSSGHKR 1316

[Close]

BLAST of NO12G01990 vs. NCBI_GenBank
Match: XP_023656777.1 (cohesin subunit SA-2-like [Paramormyrops kingsleyae])

HSP 1 Score: 164.5 bits (415), Expect = 2.900e-36
Identity = 179/667 (26.84%), Postives = 272/667 (40.78%), Query Frame = 0

Query:  190 EWVRAYEMEEEDDDEMGGTSLVDIFNFLVWSAGAKKSYVNREAEVLPELDSEEWEALVDGMVQDLREG-----------------------GMAAYPL-LEGAKFKGFRGRFAEAWEQLVKASRDGNGHKIEAVRSVIDLVRALCEVPLVSVRHTAAYAGLRLGNALVQETLALSKKVEVASRQLEAEQRKGAGR--SRKALDLNKAIEEQTGHQGALEAVLEEIFNGVFASRYRDVNEKVRADCMEGLGFFLETYPSMFLRDQFVKYLGWMLYDKAGAVRAAAAGVLLRLYSKKAYLAQLENFTSRFLKRLEDLVHDVDEGVKRTAVQVLRLLQ--GAGYLDEASHELLDEVDELLLDPHWDVRTREQAMLFFTDHVDGFNDLSGVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRLVTVVQFLDYHLGEGEQWVPEHEQLVAACVEAFERHPEGDFLYDWPTYFQLLRESQRAAASSSPAVAGLSDHEQSLLIRLLGASVKRAASHAELTFTSGCNSIATTGAGKKAGIETAGSGPAEMRAFRERKQKLEAALEAFTSGAVEDLPQVLSQFQTDARKMAGLVGLPQYFQAATIANKRNKGHFEALLKLLRDVYLKATDAAVLQDVARSFAHLLQRD 829
            +W+ AY+ + E       T+L+D+ +F +  +G K        +   + D      ++  MV++L EG                       G   YPL + G  +K FR  F E    LV   +           ++I L+  L +  + + RHT   A ++L  AL+   L LS  V+ + R  E E+ K + +    +   L + I+E    +  +E +++ IF GVF  RYRDV  ++RA CME LG ++  Y  MF  D ++KY+GWMLYDK   VR      L  LY+    + +L+ FTSRF +R+  +  D D  V   AVQ LRLL        D  S E    + +L+   H  + +     L +T  +     L   +                                                         R+V ++QF     GE E     H+ +V      ++    G  L DW +   LL              AGLS  ++ LLI +L ASV++AA             +A  G GKK            + + RERK + +  L      AV  LPQ+LS+F  D  K+A L+ +PQYFQ    +    + + EALL  +     + +DAAVLQ  A +F  L   D
Sbjct:  101 DWIAAYQTDRE-------TALLDLISFFIQCSGCKGVVTAEMFQCKQDSD------VMSKMVEELDEGSGLQYKKFLAFPWILTVTWPLDMGGGEYPLIMPGPYWKRFRSSFCEFVSVLVAHCKYSGVFDSYLTDTLISLLTELSDSRVRAFRHTCTLAAVKLLTALIGVALKLSVSVDNSQRLYEVEKAKASNKRVGSRLEKLQRKIDELQDKRLEMENMMDVIFKGVFLKRYRDVIPEIRAICMEELGVWIRLYGHMFFNDSYLKYVGWMLYDKQPDVRLKCVRGLQGLYADPLLIPKLDLFTSRFKERMLSMTLDKDHEV---AVQALRLLMIISQSCDDTLSAEDCKRLYQLVFASHRALASTAGEFL-YTKRLSACTQLDRAD-----------------------------------------------GPSERDPVAARIVAILQF----FGESEL----HQHVVYLVDSLWD--SAGSLLKDWASLTSLLLHG-----------AGLSCAQEGLLIEVLLASVRQAAEGP---------PVAGRGTGKK------------VTSARERKAQADDCLRLTQHFAV-TLPQLLSKFSDDPEKVACLLRIPQYFQTDASSAGFAEKYQEALLAEMGVAVERHSDAAVLQAAAGTFQALGSED 660

[Close]

BLAST of NO12G01990 vs. NCBI_GenBank
Match: XP_016386473.1 (PREDICTED: cohesin subunit SA-1 isoform X1 [Sinocyclocheilus rhinocerous])

HSP 1 Score: 161.0 bits (406), Expect = 3.200e-35
Identity = 171/672 (25.45%), Postives = 292/672 (43.45%), Query Frame = 0

Query:  168 EGKHSLLFESLVR-NLPVEKRMREWVRAYEMEEEDDDEMGGTSLVDIFNFLVWSAGAKKSYVNREAEVLPELDSEEWEALVDGMVQDLREGGMAAYPL-LEGAKFKGFRGRFAEAWEQLVKASRDGNGHKIEAVRSVIDLVRALCEVPLVSVRHTAAYAGLRLGNALVQETLALSKKVEVASRQLEAEQRKGAG-RSRKALDL----NKAIEEQTGHQGALEAVLEEIFNGVFASRYRDVNEKVRADCMEGLGFFLETYPSMFLRDQFVKYLGWMLYDKAGAVRAAAAGVLLRLYSKKAYLAQLENFTSRFLKRLEDLVHDVDEGVKRTAVQVLRL-LQGAGYLDEASHELLDEVDELLLDPHWDVRTREQAML---FFTDHVDGFNDLSGVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRLVTVVQFLDYHLGEGEQWVPEHEQLVAACVEAFERHPEGDFLYDWPTYFQLLRESQRAAASSSPAVAGLSDHEQSLLIRLLGASVKRAASHAELTFTSGCNSIATTGAGKKAGIETAGSGPAEMRAFRERKQKLEAALEAFTSGAVEDLPQVLSQFQTDARKMAGLVGLPQYFQAATIANKRNKGHFEALLKLLRDVYLKATDAAVLQDVARSFAHLLQRD 829
            EG    LFE + +    ++  + +W+ +Y+ + +        +L+D+ NF +  +G K +      E+   + + E   ++  M ++  E     YPL + G  +K FR  F+E    L++  +    +    + +VI L+  L +  + + RHT+  A ++L  ALV   L LS   +   RQ EAE+ K  G R+ + L+L     K ++E   +Q  +E ++  IF G+F  RYRD   ++RA C+E +G +++ Y   FL D ++KY+GW L+D+ G VR      L  LY+ +    +LE FT+RF  R+  +  D +  V   A++++ L LQG+   D  S+E  + V  L+   H  V       L    F+ H     D    E                                                           + V+ FL+  L E   +      LV +  E+ +     + L DW    +LL E              LSD ++S LI L   ++++AA           +     G GK+  + TA          +ERK +++      T   +  LP +LS++QTDA K+A L+ +PQYF     +  R + H +ALLK ++ V  K TD  VL+  +++++ L   +
Sbjct:   58 EGDPVTLFEVVKQGKSAMQSVVDDWIESYKQDRD-------LALLDLINFFIQCSGCKGTV---RIEMFRNMQNAE---IIRKMTEEFDEDS-GDYPLTISGPLWKKFRYNFSEFICVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINQDNTQRQYEAERNKMVGKRANEKLELLLQRRKELQE---NQDEIENMMNSIFKGIFVHRYRDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQNLYTNRELFPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILQGSE--DALSNEDCENVYHLVYSAHRPVAVAAGEFLHRKLFSRH-----DPQAEEALAKRRGRSSPNGNLIR------------------------------------------MLVLFFLESELHEHAAY------LVDSLWESSQ-----ELLKDWECMTELLLEEPVQGEEV------LSDRQESALIELTVCTIRQAAE---------AHPPVGRGTGKR--VLTA----------KERKTQIDDK-NKLTEHFIMALPMLLSKYQTDAEKVANLLQIPQYFDLDVYSAGRMEKHLDALLKQIKFVVEKHTDTEVLESCSKTYSILCSEE 624

[Close]

BLAST of NO12G01990 vs. NCBI_GenBank
Match: XP_016386474.1 (PREDICTED: cohesin subunit SA-1 isoform X2 [Sinocyclocheilus rhinocerous])

HSP 1 Score: 161.0 bits (406), Expect = 3.200e-35
Identity = 171/672 (25.45%), Postives = 292/672 (43.45%), Query Frame = 0

Query:  168 EGKHSLLFESLVR-NLPVEKRMREWVRAYEMEEEDDDEMGGTSLVDIFNFLVWSAGAKKSYVNREAEVLPELDSEEWEALVDGMVQDLREGGMAAYPL-LEGAKFKGFRGRFAEAWEQLVKASRDGNGHKIEAVRSVIDLVRALCEVPLVSVRHTAAYAGLRLGNALVQETLALSKKVEVASRQLEAEQRKGAG-RSRKALDL----NKAIEEQTGHQGALEAVLEEIFNGVFASRYRDVNEKVRADCMEGLGFFLETYPSMFLRDQFVKYLGWMLYDKAGAVRAAAAGVLLRLYSKKAYLAQLENFTSRFLKRLEDLVHDVDEGVKRTAVQVLRL-LQGAGYLDEASHELLDEVDELLLDPHWDVRTREQAML---FFTDHVDGFNDLSGVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRLVTVVQFLDYHLGEGEQWVPEHEQLVAACVEAFERHPEGDFLYDWPTYFQLLRESQRAAASSSPAVAGLSDHEQSLLIRLLGASVKRAASHAELTFTSGCNSIATTGAGKKAGIETAGSGPAEMRAFRERKQKLEAALEAFTSGAVEDLPQVLSQFQTDARKMAGLVGLPQYFQAATIANKRNKGHFEALLKLLRDVYLKATDAAVLQDVARSFAHLLQRD 829
            EG    LFE + +    ++  + +W+ +Y+ + +        +L+D+ NF +  +G K +      E+   + + E   ++  M ++  E     YPL + G  +K FR  F+E    L++  +    +    + +VI L+  L +  + + RHT+  A ++L  ALV   L LS   +   RQ EAE+ K  G R+ + L+L     K ++E   +Q  +E ++  IF G+F  RYRD   ++RA C+E +G +++ Y   FL D ++KY+GW L+D+ G VR      L  LY+ +    +LE FT+RF  R+  +  D +  V   A++++ L LQG+   D  S+E  + V  L+   H  V       L    F+ H     D    E                                                           + V+ FL+  L E   +      LV +  E+ +     + L DW    +LL E              LSD ++S LI L   ++++AA           +     G GK+  + TA          +ERK +++      T   +  LP +LS++QTDA K+A L+ +PQYF     +  R + H +ALLK ++ V  K TD  VL+  +++++ L   +
Sbjct:   81 EGDPVTLFEVVKQGKSAMQSVVDDWIESYKQDRD-------LALLDLINFFIQCSGCKGTV---RIEMFRNMQNAE---IIRKMTEEFDEDS-GDYPLTISGPLWKKFRYNFSEFICVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINQDNTQRQYEAERNKMVGKRANEKLELLLQRRKELQE---NQDEIENMMNSIFKGIFVHRYRDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQNLYTNRELFPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILQGSE--DALSNEDCENVYHLVYSAHRPVAVAAGEFLHRKLFSRH-----DPQAEEALAKRRGRSSPNGNLIR------------------------------------------MLVLFFLESELHEHAAY------LVDSLWESSQ-----ELLKDWECMTELLLEEPVQGEEV------LSDRQESALIELTVCTIRQAAE---------AHPPVGRGTGKR--VLTA----------KERKTQIDDK-NKLTEHFIMALPMLLSKYQTDAEKVANLLQIPQYFDLDVYSAGRMEKHLDALLKQIKFVVEKHTDTEVLESCSKTYSILCSEE 647

[Close]

BLAST of NO12G01990 vs. NCBI_GenBank
Match: KTG45000.1 (hypothetical protein cypCar_00018767 [Cyprinus carpio])

HSP 1 Score: 160.2 bits (404), Expect = 5.400e-35
Identity = 164/648 (25.31%), Postives = 281/648 (43.36%), Query Frame = 0

Query:  190 EWVRAYEMEEEDDDEMGGTSLVDIFNFLVWSAGAKKSYVNREAEVLPELDSEEWEALVDGMVQDLREGGMAAYPL-LEGAKFKGFRGRFAEAWEQLVKASRDGNGHKIEAVRSVIDLVRALCEVPLVSVRHTAAYAGLRLGNALVQETLALSKKVEVASRQLEAEQRKGAG-RSRKALDL----NKAIEEQTGHQGALEAVLEEIFNGVFASRYRDVNEKVRADCMEGLGFFLETYPSMFLRDQFVKYLGWMLYDKAGAVRAAAAGVLLRLYSKKAYLAQLENFTSRFLKRLEDLVHDVDEGVKRTAVQVLRLLQGAGYLDEASHELLDEVDELLLDPHWDVRTREQAML---FFTDHVDGFNDLSGVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRLVTVVQFLDYHLGEGEQWVPEHEQLVAACVEAFERHPEGDFLYDWPTYFQLLRESQRAAASSSPAVAGLSDHEQSLLIRLLGASVKRAASHAELTFTSGCNSIATTGAGKKAGIETAGSGPAEMRAFRERKQKLEAALEAFTSGAVEDLPQVLSQFQTDARKMAGLVGLPQYFQAATIANKRNKGHFEALLKLLRDVYLKATDAAVLQDVARSFAHLLQRD 829
            +W+ +Y+ + +        +L+D+ NF +  +G K +      E+   + + E   ++  M ++  E     YPL + G ++K FR  F E    LV+  +    +    + +VI L+  L +  + + RHT+  A ++L  ALV   L LS   +   RQ EAE+ K AG R+ + L+L     K ++E   +Q  +E ++  IF G+F  RYRD   ++RA C+E +G +++ Y   FL D ++KY+GW L+D+ G VR      L  LY+ +    +LE FT+RF  R+  +  D +  V   A++++ L+   G  D  S+E  + V  L+   H  V       L    F+ H     D    E                                                           + V+ FL+  L E   +      LV +  ++ +     D L DW    +LL E              L D  +S LI L+  ++++AA           +     G GK+  + TA          +E+K +++      T   +  LP +LS++QTDA K+A L+ +PQYF     ++ R + H +ALLK +R V  K T+  VL+  +++++ L   +
Sbjct:  100 DWIESYKQDRD-------LALLDLINFFIHCSGCKGTV---RIEMFRNMQNAE---IIRKMTEEFDEDS-GDYPLTMAGPQWKKFRYNFCEFIMVLVRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINQDNTQRQYEAERNKVAGKRANEKLELLLEKRKELQE---NQDEIENMMNSIFKGIFVHRYRDAIAEIRAICIEEIGVWMKLYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQTLYTNRELYPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLIL-HGSEDALSNEDCENVYHLVYSAHRPVAVAAGEFLHRKLFSRH-----DPQAEEALAKRRGRNSPNGNLIR------------------------------------------MLVLFFLESELHEHAAY------LVDSLWDSSQ-----DLLKDWDCMVELLLEDPLQGEEV------LGDRHESALIELMVCTIRQAAE---------AHPPVGRGTGKR--VLTA----------KEKKTQIDDK-NRLTEHLIVALPMLLSKYQTDAEKVANLLQVPQYFDLEVYSSGRMEKHLDALLKQIRVVVDKHTEMEVLEACSKTYSILCSEE 643

[Close]

BLAST of NO12G01990 vs. NCBI_GenBank
Match: XP_016331525.1 (PREDICTED: cohesin subunit SA-1-like isoform X1 [Sinocyclocheilus anshuiensis])

HSP 1 Score: 160.2 bits (404), Expect = 5.400e-35
Identity = 171/672 (25.45%), Postives = 291/672 (43.30%), Query Frame = 0

Query:  168 EGKHSLLFESLVR-NLPVEKRMREWVRAYEMEEEDDDEMGGTSLVDIFNFLVWSAGAKKSYVNREAEVLPELDSEEWEALVDGMVQDLREGGMAAYPL-LEGAKFKGFRGRFAEAWEQLVKASRDGNGHKIEAVRSVIDLVRALCEVPLVSVRHTAAYAGLRLGNALVQETLALSKKVEVASRQLEAEQRKGAG-RSRKALDL----NKAIEEQTGHQGALEAVLEEIFNGVFASRYRDVNEKVRADCMEGLGFFLETYPSMFLRDQFVKYLGWMLYDKAGAVRAAAAGVLLRLYSKKAYLAQLENFTSRFLKRLEDLVHDVDEGVKRTAVQVLRL-LQGAGYLDEASHELLDEVDELLLDPHWDVRTREQAML---FFTDHVDGFNDLSGVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRLVTVVQFLDYHLGEGEQWVPEHEQLVAACVEAFERHPEGDFLYDWPTYFQLLRESQRAAASSSPAVAGLSDHEQSLLIRLLGASVKRAASHAELTFTSGCNSIATTGAGKKAGIETAGSGPAEMRAFRERKQKLEAALEAFTSGAVEDLPQVLSQFQTDARKMAGLVGLPQYFQAATIANKRNKGHFEALLKLLRDVYLKATDAAVLQDVARSFAHLLQRD 829
            EG    LFE + +    ++  + +W+ +Y+ + +        +L+D+ NF +  +G K +      E+   + + E   ++  M ++  E     YPL + G  +K FR  F E    L++  +    +    + +VI L+  L +  + + RHT+  A ++L  ALV   L LS   +   RQ EAE+ K AG R+ + L+L     K ++E   +Q  +E ++  +F G+F  RYRD   ++RA C+E +G +++ Y   FL D ++KY+GW L+D+ G VR      L  LY+ +    +LE FT+RF  R+  +  D +  V   A++++ L LQG+   D  S+E  + V  L+   H  V       L    F+ H     D    E                                                           + V+ FL+  L E   +      LV +  E+ +     + L DW    +LL E              L D ++S LI L   ++++AA           +     G GK+  + TA          +ERK +++      T   +  LP +LS++QTDA K+A L+ +PQYF     +  R + H EALLK ++ V  K TD  VL+  +++++ L   +
Sbjct:   81 EGDPVTLFEVVKQGKSAMQSVVDDWIESYKQDRD-------LALLDLINFFIQCSGCKGTV---RIEMFRNMQNAE---IIRKMTEEFDEDS-GDYPLTISGPLWKKFRYNFCEFICVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINQDNTQRQYEAERNKMAGKRANEKLELLLQRRKELQE---NQDEIENMMNSVFKGIFVHRYRDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQNLYTNRELFPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILQGSE--DALSNEDCENVYHLVYSAHRPVAVAAGEFLHRKLFSRH-----DPQAEEALAKRRGRSSPNGNLIR------------------------------------------MLVLFFLESELHEHAAY------LVDSLWESSQ-----ELLKDWECMTELLLEEPVQGEEV------LLDRQESALIELTVCTIRQAAE---------AHPPVGRGTGKR--VLTA----------KERKMQIDDK-NKLTEHFIMALPMLLSKYQTDAEKVANLLQIPQYFDLDVYSAGRMEKHLEALLKQIKFVVEKHTDTEVLEACSKTYSILCSEE 647

The following BLAST results are available for this feature:

BLAST of NO12G01990 vs. NCBI_GenBank

BLAST of NO12G01990 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM25790.1	0.000e+0	55.35	cohesin subunit sa-1 [Nannochloropsis gaditana]	[more]
OWZ13407.1	1.300e-44	23.75	hypothetical protein PHMEG_00013273 [Phytophthora ...	[more]
GAY00543.1	2.300e-41	23.60	Hypothetical protein PINS_008394, partial [Pythium...	[more]
ETI41970.1	1.100e-38	24.46	hypothetical protein, variant 2 [Phytophthora para...	[more]
XP_002904221.1	4.000e-38	24.29	cohesin subunit, putative [Phytophthora infestans ...	[more]
XP_023656777.1	2.900e-36	26.84	cohesin subunit SA-2-like [Paramormyrops kingsleya...	[more]
XP_016386473.1	3.200e-35	25.45	PREDICTED: cohesin subunit SA-1 isoform X1 [Sinocy...	[more]
XP_016386474.1	3.200e-35	25.45	PREDICTED: cohesin subunit SA-1 isoform X2 [Sinocy...	[more]
KTG45000.1	5.400e-35	25.31	hypothetical protein cypCar_00018767 [Cyprinus car...	[more]
XP_016331525.1	5.400e-35	25.45	PREDICTED: cohesin subunit SA-1-like isoform X1 [S...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL126	nonsL126	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
nonsL124	nonsL124	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR014	ncniR014	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR008	ngnoR008	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR006	ngnoR006	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK010154	NSK010154	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO12G01990.1	NO12G01990.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|648373	gene_5357	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100021g49	gene4707	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO12G01990.1	NO12G01990.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO12G01990 ID=NO12G01990|Name=NO12G01990|organism=Nannochloropsis oceanica|type=gene|length=4980bp
ATGGCTCCAGCAGTGCGGCGCAGCGGTCGGGCATCGGTCAAGCCCGACAA
TGTTTACGAGGACGCGTTGCGCGAGGCCGCAGAGAAGGTAACCAAGCAGC
GCAAGACGACCCGGCCCCAGGTGGACGAGGATAACGACTATTCCGAGAAA
GAGGGACGCGAGGAGGAGGCGCAAAGTGATGACGAGGAGGAGGAGGAGGA
CGAGGACGAGGGCCCTTCGAGGAAGCGCAAGCGCAAGCTGATGTCTACGA
AGAAGGTCTCGCCCCGCGAGGGCGCCACGACCAAGAGCAAGAACAAGGCC
AAGACCCCCGCACCCCGGGCACAGAAAGATAAGAAAAAGCCGATCGATCC
CTACAGCAGCGATGAGGAGACATCGGACGAGGAGGGCCTGGACCGGCTCT
TGACCGAAGGCGCGGCGGCGAGGGGGAAAGGGAAGGGCAAGGCGGGAGGT
GCGTCGAAGCGGGCGGCCGCAACGCGTGGGCGGGGAATGGGAAATTTGAA
GGAGGGTAAGCACAGCTTGCTGTTTGAGAGTTTGGTCCGGAACTTGCCGG
TGGAAAAGCGCATGCGGGAATGGGTGCGGGCGTATGAGATGGAAGAGGAG
GACGATGACGAAATGGGGGGGACGTCTTTGGTCGATATTTTCAACTTTTT
GGTTTGGAGCGCTGGGGCGAAGAAGAGCTATGTGAACCGTGAGGCTGAGG
TCCTTCCTGAGCTGGACTCAGAGGAATGGGAGGCGCTGGTGGATGGCATG
GTGCAAGATTTGCGGGAGGGCGGAATGGCTGCTTACCCTTTGCTGGAGGG
CGCCAAGTTCAAGGGCTTTCGTGGTCGGTTTGCCGAGGCGTGGGAACAGC
TGGTCAAGGCGTCCCGGGATGGAAATGGGCATAAGATAGAGGCTGTTCGC
TCGGTCATTGATCTGGTGCGAGCCTTGTGTGAGGTGCCATTGGTTTCGGT
ACGACACACGGCGGCCTACGCGGGACTGCGGCTGGGCAATGCCTTGGTGC
AGGAGACATTGGCGTTGAGCAAGAAGGTCGAAGTGGCAAGTCGGCAGCTC
GAAGCGGAGCAGCGGAAGGGTGCAGGTCGAAGCCGAAAAGCTCTGGATTT
GAATAAGGCAATTGAGGAGCAGACGGGTCATCAGGGGGCGTTGGAAGCCG
TGCTGGAGGAGATTTTCAACGGAGTGTTTGCCTCGCGGTATCGGGATGTG
AATGAGAAGGTACGAGCCGATTGCATGGAGGGCCTGGGCTTCTTCTTGGA
GACCTATCCTAGCATGTTTTTGCGGGATCAGTTCGTGAAGTATTTAGGGT
GGATGCTCTATGATAAGGCGGGTGCGGTGCGGGCGGCAGCGGCGGGGGTG
CTGCTGCGACTGTATAGCAAGAAAGCCTACCTTGCCCAGCTTGAGAATTT
CACCTCCAGGTTTCTGAAGCGCTTGGAAGATTTAGTGCACGATGTTGATG
AGGGGGTGAAGCGAACGGCGGTTCAAGTTTTACGTTTGCTGCAGGGGGCG
GGTTATCTTGATGAGGCTTCGCACGAACTGTTGGATGAGGTGGATGAGTT
GCTGCTAGACCCGCATTGGGACGTGCGGACAAGGGAGCAGGCGATGTTGT
TTTTTACTGACCACGTCGATGGGTTCAATGATTTGTCGGGTGTCGAGGAG
GACGAGGAGGGGAATAACGAGCAGGAGGAGGGGTGGGAGGACGATACCGA
CGTAGCGGAAGAGGAGGGCAAGAGGAAAGACAAAACCGCGGTGGCGTCGA
AGAAGAAGCGACATCAGCGTCGCAGCACGAGCGGGAAAGGCGGGGCTCGC
CGACGTGGAGTAATGAAGCGCCTGGTGACGGTAGTGCAGTTCTTGGATTA
CCATTTGGGGGAGGGAGAGCAGTGGGTCCCCGAGCACGAGCAGCTGGTGG
CTGCCTGTGTGGAGGCCTTTGAGCGGCACCCGGAAGGCGACTTCTTGTAC
GACTGGCCTACATACTTCCAGCTTCTCCGCGAGAGTCAACGGGCTGCCGC
TTCCTCTTCTCCCGCTGTTGCCGGGCTTTCGGACCACGAGCAGTCCCTCC
TCATCCGCCTGTTGGGAGCCAGTGTCAAACGTGCGGCTTCCCATGCCGAG
CTTACCTTCACCTCGGGCTGCAACTCCATAGCCACTACAGGTGCGGGCAA
GAAGGCAGGGATAGAGACTGCTGGTTCGGGGCCGGCCGAGATGCGAGCGT
TTCGGGAGCGGAAGCAGAAGCTTGAGGCGGCGCTTGAGGCGTTCACCTCG
GGTGCGGTGGAGGACTTGCCTCAAGTGCTCAGTCAGTTTCAGACGGATGC
CAGAAAGATGGCGGGTTTGGTTGGGCTGCCCCAGTATTTCCAGGCGGCCA
CTATAGCGAACAAACGCAATAAAGGGCATTTTGAAGCGCTGCTCAAGCTC
CTGCGTGATGTGTATCTGAAGGCAACTGACGCGGCGGTGCTGCAGGACGT
GGCTCGTTCTTTCGCTCACCTGCTCCAGCGCGACCAGGAGGCGGGGGGGC
GCTTGCACAATGTCGGTGCCATCCTTCAGATCATCGTGGCCGAATTATGT
CGCCGCCTTGAGGCTCTGAATATTGATGGAAGCTGCAGTGGCAGCAGCAA
TAAGGAGAACAAGTGTGGGCGGGGGGATGTCTCCAGCTCGGGTAAAAAGG
ATGCCGATTTTTCGGCGAGCCTGGTGTTGTTACAGCTTGGCACACTAGGC
AAGCAGATTGACTTGGCTGATTATATTGGGGGGGACGGAGAAGGTGGGAA
GCTGGGGGCGTTGGCGGCGAGGGTGCAGGAGGTGGTTATGTTCCGACTGC
AGGAGGAGCAGACCTGGGGTGGGGGGGAGGAACGGTTGCAGTTGACAGTG
CGCGTGGTTCGGGAGGGCACGTATTTGTTGTATATCCTCCTTTTGCACTC
GACCCTTGGACTTATACGCCTGGCGCAGGAGCAGAAGCCGCTGACGAAGA
GGATGGACAAGAAGAAGGCCGTCGCGACAAAGGGAGGGCGGAACCGCAAG
GCGGGTGAGGACACTGATGGGGAGGAAGATGACGACGATGCCGACGTGCA
GGATAAGGATGTAGACGAGGAAGACGAGGACGATGATGTAGGGAAGGAGG
AGGCTAACGCGGTGGTGGCCCAGCGCACTATCTTGCTGGAGGTCTTGAGC
GCCGTGTTGAGACTTGACGGTTCGAGTATCGTGCCTGATGGCGAGGAAGA
GGACGAGGAGGAGGACGGGAGCGAGATGGACAATGAGGAAGCGAACGGCC
GCCGCAGTAGCCAGGGGAAAAAAAAGGAGCGCAAGGCCGGCAAGGGTAAG
GTTTCGGCGACGGTGGTGGCAGCCATGGAGGAATTGAAGAAGACAGCCTA
TGCCGTGGTTAGCGATTTGCGCTTTCTCTTCCGGCCCCTGTGCGCCCGCT
ATCAGGTTCTGCATCGGATAGTCTGGACACCCGAGCCCGATTTCCTGCGT
CTGTTACAATTCTTCTTTCAGAAGGAGGAGGCTCGCTTCGAGGAGGCCGC
GGTGTTGGAGGCGGAGGGCGGGGGCGAGGGGGACGCTGCGGCCGCGGACG
AAGTGCTGCGTCGGGACTTGCTGGACCCCTTAATTCGCTCTGTGCTATAC
ACCACGGAAAGCATCAACCGGCGGCAGGCGGCGGCAATCGCTGCTCATTT
TGTGGACTCGGGCCGGCAGTCGACAGAGAGTGTACGCTTTTTTATGAAGC
AGCTCAAGGACCTGGACATGAAGCTTTACCTGGAGGTTCAAATGACCACC
CTCCGTTCCTGTTACCACAAGTGGTGTCAAACAGGCTCAGAGGTGGAGGA
TGAGGAGGCGGAGGCAGCAGCGGCGGCGGCAGGCCTGGAGAAGATAACGC
GGTTGGGCGTGCGCATGGCGCAGACAATGGGGGTCGGGAGGCTTAAGGCT
GAGACACCGGCGGCGGACTCTTTCGTGCGGTTTTTGAAAAGCGGTGTGGC
CTTTGCTCTGGAAGATGCACCCAAGAACTTCACGTTTTTGGATGCCTTGC
GGTGTTATATGCCGAAGCTACCCGAAAACCGCATGCACGAGGTGGCTCAT
CTTTTCCGTGAGAAGACTGCAGCGCTCCCCCAGGTCGTCAAGGAGCAAGT
GGAGCATGAACGGCAGCTGGTCGCGGCGGAGGCAGAGGATGCAGACCACA
CGGACGAGGGCATTGCTTACCTCAACTTCTACTATGAGCTCTATGGGCAC
TTTGGCGTCGCAGTGGCGGGGATGGGTGCCGGCGCTGCGCTAAAGCGGGC
CTCGACCACTCCCTCAAAGCTCAAGCGAGGAGTCGCCAGTCCGCGAATCA
CGGGCTCGACGGTCCAGAAGCGGCGGGGCCTTGCTGGCAGCAGCAGCAGG
AAGGAAGGGGAAACTGGTGGCAAGATGGTGTCCTCCTTTTCTTCTGGTGA
TCGTCGTCATCGTCATGGCACGTCTGCGGCTGCTGAGGAGTCAGAGCTGG
GCAATGACACAGGTGATGACGAGGAGGATTCGATTCACTCTTCTGGGGAC
GAAAAAGGGAGGGATAGCTTTTTGTCCGGCGAGAAAGAAGTCAGCAGTAT
TTTGCTGACCGGGCATGTCCTGGGTCAGGCGCGCGGTGGCTCAAAGGGCT
CGAGTGCGGGGTCGTCGGTTTCGGGGCGGCGCTCTAGCGCCATTCTGGCC
TCGGTGCACGAGACGGAGGAAGACATCGAAGATGAAGAGGACGAGGATGA
GGACGAGGACGTTGACGAGGACGTGGATTTTCGTGGGAGTCTCAGCCAGC
GTAGCCAGCGCCGTTCCGGGAGCAAAAGCCAGCGAAGCACGGTTTCGAGG
AAGAAGAGGGAGCGGGCGTCGTCCCAGGCTGAGGAGGCAGAGATGGAAGG
ACGTAGTGCCACGGGTGGTTTTGAGAGTGACAGTGAGACGTCCATTTTTG
GGGAGCTCGTGCTTTCTAAGGCTGTCAGGGGTTGCGCTGGGGGAAATATG
GGCAAGGGCAGTAAGAGATCGCGAAAGTAG

protein sequence of NO12G01990.1

>NO12G01990.1-protein ID=NO12G01990.1-protein|Name=NO12G01990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1660bp
MAPAVRRSGRASVKPDNVYEDALREAAEKVTKQRKTTRPQVDEDNDYSEK
EGREEEAQSDDEEEEEDEDEGPSRKRKRKLMSTKKVSPREGATTKSKNKA
KTPAPRAQKDKKKPIDPYSSDEETSDEEGLDRLLTEGAAARGKGKGKAGG
ASKRAAATRGRGMGNLKEGKHSLLFESLVRNLPVEKRMREWVRAYEMEEE
DDDEMGGTSLVDIFNFLVWSAGAKKSYVNREAEVLPELDSEEWEALVDGM
VQDLREGGMAAYPLLEGAKFKGFRGRFAEAWEQLVKASRDGNGHKIEAVR
SVIDLVRALCEVPLVSVRHTAAYAGLRLGNALVQETLALSKKVEVASRQL
EAEQRKGAGRSRKALDLNKAIEEQTGHQGALEAVLEEIFNGVFASRYRDV
NEKVRADCMEGLGFFLETYPSMFLRDQFVKYLGWMLYDKAGAVRAAAAGV
LLRLYSKKAYLAQLENFTSRFLKRLEDLVHDVDEGVKRTAVQVLRLLQGA
GYLDEASHELLDEVDELLLDPHWDVRTREQAMLFFTDHVDGFNDLSGVEE
DEEGNNEQEEGWEDDTDVAEEEGKRKDKTAVASKKKRHQRRSTSGKGGAR
RRGVMKRLVTVVQFLDYHLGEGEQWVPEHEQLVAACVEAFERHPEGDFLY
DWPTYFQLLRESQRAAASSSPAVAGLSDHEQSLLIRLLGASVKRAASHAE
LTFTSGCNSIATTGAGKKAGIETAGSGPAEMRAFRERKQKLEAALEAFTS
GAVEDLPQVLSQFQTDARKMAGLVGLPQYFQAATIANKRNKGHFEALLKL
LRDVYLKATDAAVLQDVARSFAHLLQRDQEAGGRLHNVGAILQIIVAELC
RRLEALNIDGSCSGSSNKENKCGRGDVSSSGKKDADFSASLVLLQLGTLG
KQIDLADYIGGDGEGGKLGALAARVQEVVMFRLQEEQTWGGGEERLQLTV
RVVREGTYLLYILLLHSTLGLIRLAQEQKPLTKRMDKKKAVATKGGRNRK
AGEDTDGEEDDDDADVQDKDVDEEDEDDDVGKEEANAVVAQRTILLEVLS
AVLRLDGSSIVPDGEEEDEEEDGSEMDNEEANGRRSSQGKKKERKAGKGK
VSATVVAAMEELKKTAYAVVSDLRFLFRPLCARYQVLHRIVWTPEPDFLR
LLQFFFQKEEARFEEAAVLEAEGGGEGDAAAADEVLRRDLLDPLIRSVLY
TTESINRRQAAAIAAHFVDSGRQSTESVRFFMKQLKDLDMKLYLEVQMTT
LRSCYHKWCQTGSEVEDEEAEAAAAAAGLEKITRLGVRMAQTMGVGRLKA
ETPAADSFVRFLKSGVAFALEDAPKNFTFLDALRCYMPKLPENRMHEVAH
LFREKTAALPQVVKEQVEHERQLVAAEAEDADHTDEGIAYLNFYYELYGH
FGVAVAGMGAGAALKRASTTPSKLKRGVASPRITGSTVQKRRGLAGSSSR
KEGETGGKMVSSFSSGDRRHRHGTSAAAEESELGNDTGDDEEDSIHSSGD
EKGRDSFLSGEKEVSSILLTGHVLGQARGGSKGSSAGSSVSGRRSSAILA
SVHETEEDIEDEEDEDEDEDVDEDVDFRGSLSQRSQRRSGSKSQRSTVSR
KKRERASSQAEEAEMEGRSATGGFESDSETSIFGELVLSKAVRGCAGGNM
GKGSKRSRK*

Synonyms

Publications