Naga_100021g49, gene4707 (gene) Nannochloropsis gaditana

Overview
NameNaga_100021g49
Unique Namegene4707
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:553795..559106 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100021g49
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:553795..559106 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL008ngnoL008Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL007ngnoL007Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL006ngnoL006Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G01990NO12G01990Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4873rna4873-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4873rna4873Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4873

>rna4873-protein ID=rna4873-protein|Name=rna4873|organism=Nannochloropsis gaditana|type=polypeptide|length=1695bp
MLPFALFPHASSDRGDRTSLLSYSRALRPNLDNTLTPYLPTNLHLCSRVY
NMVAELRRSGRVSVRPDSVYEDALREAAGKKARRPLALRLQEPVESSPGG
QISHEWQERSKERMTIGKNEKANGSSKRKRSSLKRATETDVESSRETLAK
KEPITYSTDDETSDEDDLDKIMGEKNRRKHRRDAGMRKGAGGRGLANLRE
GKCSLLFECLARELPIEKRMKDWVVAYEKEEDERGDDADGMMSSSLVDMF
NFLLWSSGATKTYVKRDRETLPMLDSEEWETMINGIVQDMRAGGVLSYPL
LEGARFKGFRGRFAEAWELLVKAVREGNAHKLEPVHAVIDLVRALCEVPL
VSIRHTAAYAGLRLGNALVQQTLALSKKVEVASRQLEAEQHKGGARSRKA
LDLNSAIMDLTSHQTALEAVLEEIFNGVFASRYRDVSERVRADCMDGLGF
FLDTYPSMFLRDQFVKYLGWMLYDKASTVRAAAAGVLLRLYSKPVYLSQL
ENFTARFLKRLEDLVHDVDEGVKRTAIQVLRLLQGAGYLDEASQELLDEV
DELLLDPAWDVRTREQAMLFFTDHVDGFNELTDGEDEESRQGEKEIDEGA
SSGGSPEKEKSKETVPVVKTKQQLRRDSTGRQGGARRRGVIKRLVTVVQF
LDYHLGERERWAPEHEELVAACVEAFERHPDGDFLYDWPTYFHLLGDESA
ASSSLRAGSTSTDMRLSDHEQSLLIRVLGASVKRATSFASPKQGNNSAAS
ERGRNFSGSAKPADMREARHRGQVLEAAVEAFTSGAVEDLPKVLSRFQTD
PGKMAGLVGLPQYLQASAIANKRNRGHFEALLKLLRGTYLKATDGAVLQD
IARSLSHLLQRDEEECGRLHNVGAVLYSIVAELLRRLGAVETARDGAGTK
ENKRRRRAGCEDTDFSTGLVLLQLGTLAKQIDITDYLGENEDGRLLEVTS
CVQKVLLARLREVQNWTGSTEHLQLVVRVVREGLYLLYVVLLHSTRGLIF
LAQAKRPANKKLEAMDNSHKHGPSHFGEIEKKGESDKDDVMLDLIESSDC
DNIDNVGEKEANAILAQRNTLLGALSAVLSLNRPSCSNENGEGSEDKAEL
EGTDNNKSHNGCRSGNAFSAHTVRTRENESFRAIIDAIEALKKAAYVLVS
DLRFLFRPLCSRYQILCRVAWTPEPDFLRLLQTFFQTEEARYEEAVATAK
AQGSEEDLQAADEILRRDLLDPLIRSVLYTTESINRRQAAAIAAHFVDSG
RESTESVRFLMKQLKDLDVKLYLEVQMTTLRSCFHKWFQKPIEERALGGG
EADEDYEVADAAAAAAMEKILRLGTRMAQTLGVGRVKDETPAADSFVRFI
KSGIAFALDEAPKNFTFLDVLRCYMPKLPESRTREVVQLFRERTAKLPEP
VKRQVEHERQLIAAEEEEVDLTQDGIAYLNFYHELYGHFGGAGALASGAP
IRTSRTPSKDKDGNDHPHALSTSSKKRLGLPTSCVGQTKNGTNRMNHPIS
FPGDLKRRARVEEGCLASGAVSIDEEESIRSFEDGKEVGLSSCHEESDGD
GNRMLQSIEACSRMGGRRTTSLASRRRSSSLLPSVHEMQDAIDEADSSEE
EEEKEGMVSWRESKATRGGEQSHRRRGTRKRGRISSQAEEEAAIEGRGDS
RGIDSDSETSIFGELTLSKACGKGAGKTEKRKMDGGATGRKMSEN
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Synonyms
Publications