jgi.p|Nanoce1779_2|648373, gene_5357 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|648373
Unique Namegene_5357
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_13:232869..237540 +

Link to JBrowse

Properties
Property NameValue
TranscriptId648459
ProteinId648373
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_13supercontigscaffold_13:232869..237540 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL014ncniL014Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G01990NO12G01990Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|648373mRNA_5357-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|648373mRNA_5357Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|648373

>mRNA_5357-protein ID=mRNA_5357-protein|Name=jgi.p|Nanoce1779_2|648373|organism=Nannochloropsis oceanica|type=polypeptide|length=1507bp
MAPAVRRSGRASVKPDNVYEDALREAAEKVTKQRKTTRPQVDEDNDYSEK
EGREEEAQSDDEEEEEDEDEGPSRKRKRKLMSTKKVSPREGATTKSKNKA
KTPAPRAQKDKKKPIDPYSSDEETSDEEGLDRLLTEGAAARGKGKGKAGG
ASKRAAATRGRGMGNLKEGKHSLLFESLVRNLPVEKRMREWVRAYEMEEE
DDDEMGGTSLVDIFNFLVWSAGAKKSYVNREAEVLPELDSEEWEALVDGM
VQDLREGGMAAYPLLEGAKFKGFRGRFAEAWEQLVKASRDGNGHKIEAVR
SVIDLVRALCEVPLVSVRHTAAYAGLRLGNALVQETLALSKKVEVASRQL
EAEQRKGAGRSRKALDLNKAIEEQTGHQGALEAVLEEIFNGVFASRYRDV
NEKVRADCMEGLGFFLETYPSMFLRDQFVKYLGWMLYDKAGAVRAAAAGV
LLRLYSKKAYLAQLENFTSRFLKRLEDLVHDVDEGVKRTAVQVLRLLQGA
GYLDEASHELLDEVDELLLDPHWDVRTREQAMLFFTDHVDGFNDLSGVEE
DEEGNNEQEEGWEDDTDVAEEEGKRKDKTAVASKKKRHQRRSTSGKGGAR
RRGVMKRLVTVVQFLDYHLGEGEQWVPEHEQLVAACVEAFERHPEGDFLY
DWPTYFQLLRESQRAAASSSPAVAGLSDHEQSLLIRLLGASVKRAASHAE
LTFTSGCNSIATTGAGKKAGIETAGSGPAEMRAFRERKQKLEAALEAFTS
GAVEDLPQVLSQFQTDARKMAGLVGLPQYFQAATIANKRNKGHFEALLKL
LRDVYLKATDAAVLQDVARSFAHLLQRDQEAGGRLHNVGAILQIIVAELC
RRLEALNIDGSCSGSSNKENKCGRGIVSSSGKKDADFSASLVLLQLGTLG
KQIDLADYIGGDGEGGKLGALAARVQEVVMFRLQEEQTWGGGEERLQLTV
RVVREGTYLLYILLLHSTLGLIRLAQEQKPLTKRMDKKKAVATKGGRNRK
AGEDTDGEEDDDDADVQDKDVDEEDEDDDVGKEEANAVVAQRTILLEVLS
AVLRLDGSSIVPDGEEEDEEEDGSEMDNEEANGRRSSQGKKKERKAGKGK
VSATVVAAMEELKKTAYAVVSDLRFLFRPLCARYQVLHRIVWTPEPDFLR
LLQFFFQKEEARFEEAAVLEAEGGGEGDAAAADEVLRRDLLDPLIRSVLY
TTESINRRQAAAIAAHFVDSGRQSTESVRFFMKQLKDLDMKLYLEVQMTT
LRSCYHKWCQTGSEVEDEEAEAAAAAAGLEKITRLGVRMAQTMGVGRLKA
ETPAADSFVRFLKSGVAFALEDAPKNFTFLDALRCYMPKLPENRMHEVAH
LFREKTAALPQVVKEQVEHERQLVAAEAEDADHTDEGIAYLNFYYELYGH
FGVAVAGMGAGAALKRASTTPSKLKRGVASPRITGSTVQKRRGLAGSSSR
KEGETGGKMVSSFSSGDRRHRHGTSAAAEESELGNDTGARWLKGLECGVV
GFGAAL*
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Synonyms
Publications