NO12G00880, NO12G00880 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G00880 vs. NCBI_GenBank
Match: XP_005854168.1 (nuclear receptor 2c2-associated protein [Nannochloropsis gaditana CCMP526] >XP_005854271.1 nuclear receptor 2c2-associated protein [Nannochloropsis gaditana CCMP526] >EKU22089.1 nuclear receptor 2c2-associated protein [Nannochloropsis gaditana CCMP526] >EKU22191.1 nuclear receptor 2c2-associated protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 162.5 bits (410), Expect = 1.500e-36 Identity = 101/244 (41.39%), Postives = 126/244 (51.64%), Query Frame = 0 Query: 3 ALVDLTAPSTTTKVRVSSVLNRNVKEFGVAHLFDGSPDTCWNSDQGSPQWIWLQFQRPVHIHTIQIMFQGGFAAEEMQVGVTFHTPLSPXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPFTLFEDATAGVRPKT----KAASDLVTSFCPNDDNSLQSFHLSEPIAVTAAALAVGEAGRAAIEAAAAPKP--------------------PMVTDMRLTFLSSFDFYGRITAYQLAVLGWEQGE 223 A DL+APST TKV+VSSVL+RNV+EFG AH+FDGS D+CWNSDQG+PQWI L+F RPV + + +MFQGGFA +EMQV VTFHTP PP G T K+ LV +F P+DDN QSF L TAA A + A++ A + V +M+LTF S DFYGR+T Y+LAV G E+ + Sbjct: 2 AFTDLSAPSTKTKVKVSSVLHRNVREFGAAHMFDGSSDSCWNSDQGTPQWIVLRFLRPVLVCRLLLMFQGGFAGKEMQVRVTFHTPPLSRAPLPASSPIAPSADAAATPCEHEHTSPPPSKPRTSVVNGKDSSTTLQMKSRPMLVGTFYPDDDNKSQSFEL------TAAIRAAAQEREASVRGAERDEDIRTYHHDRGPEEGEEGFDCMCKVVEMKLTFNGSSDFYGRVTLYRLAVWGLEEDQ 239
BLAST of NO12G00880 vs. NCBI_GenBank
Match: EWM25921.1 (nuclear receptor 2c2-associated protein [Nannochloropsis gaditana]) HSP 1 Score: 162.5 bits (410), Expect = 1.500e-36 Identity = 101/244 (41.39%), Postives = 126/244 (51.64%), Query Frame = 0 Query: 3 ALVDLTAPSTTTKVRVSSVLNRNVKEFGVAHLFDGSPDTCWNSDQGSPQWIWLQFQRPVHIHTIQIMFQGGFAAEEMQVGVTFHTPLSPXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPFTLFEDATAGVRPKT----KAASDLVTSFCPNDDNSLQSFHLSEPIAVTAAALAVGEAGRAAIEAAAAPKP--------------------PMVTDMRLTFLSSFDFYGRITAYQLAVLGWEQGE 223 A DL+APST TKV+VSSVL+RNV+EFG AH+FDGS D+CWNSDQG+PQWI L+F RPV + + +MFQGGFA +EMQV VTFHTP PP G T K+ LV +F P+DDN QSF L TAA A + A++ A + V +M+LTF S DFYGR+T Y+LAV G E+ + Sbjct: 2 AFTDLSAPSTKTKVKVSSVLHRNVREFGAAHMFDGSSDSCWNSDQGTPQWIVLRFLRPVLVCRLLLMFQGGFAGKEMQVRVTFHTPPLSRAPLPASSPIAPSADAAATPCEHEHTSPPPSKPRTSVVNGKDSSTTLPMKSRPMLVGTFYPDDDNKSQSFEL------TAAIRAAAQEREASVRGAERDEDIRTYHHDRGPEEGEEGFDCMCKVVEMKLTFNGSSDFYGRVTLYRLAVWGLEEDQ 239
BLAST of NO12G00880 vs. NCBI_GenBank
Match: XP_013389358.1 (nuclear receptor 2C2-associated protein [Lingula anatina]) HSP 1 Score: 104.4 bits (259), Expect = 4.800e-19 Identity = 70/201 (34.83%), Postives = 87/201 (43.28%), Query Frame = 0 Query: 17 RVSSVLNRNVKEFGVAHLFDGSPDTCWNSDQGSPQWIWLQFQRPVHIHTIQIMFQGGFAAEEMQVGVTFHTPLSPXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPFTLFEDATAGVRPKTKAASDLVTSFCPNDDNSLQSFHLSEPIAVTAAALAVGEAGRAAIEAAAAPKPPMVTDMRLTFLSSFDFYGRITAYQLAVLG 218 RVSSVLNR+VK+FG L DG +TCWNSDQGSPQW+ L+F + V I + I FQGGFA +E V V K+ ++L T P D N LQ F L+ P PP V+ +R+ F SS DFYGRIT Y+L V+G Sbjct: 13 RVSSVLNRDVKQFGKKFLLDGDDETCWNSDQGSPQWVLLEFSKQVVIEELHIQFQGGFAGKECHVEV------------------------------------------------ASIKSDEFTEL-TKIFPEDSNKLQVFTLT-------------------------PAPP-VSKLRIVFTSSTDFYGRITIYKLDVIG 138
BLAST of NO12G00880 vs. NCBI_GenBank
Match: XP_021345894.1 (nuclear receptor 2C2-associated protein-like [Mizuhopecten yessoensis]) HSP 1 Score: 103.6 bits (257), Expect = 8.200e-19 Identity = 70/217 (32.26%), Postives = 93/217 (42.86%), Query Frame = 0 Query: 1 MEALVDLTAPSTTTKVRVSSVLNRNVKEFGVAHLFDGSPDTCWNSDQGSPQWIWLQFQRPVHIHTIQIMFQGGFAAEEMQVGVTFHTPLSPXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPFTLFEDATAGVRPKTKAASDLVTSFCPNDDNSLQSFHLSEPIAVTAAALAVGEAGRAAIEAAAAPKPPMVTDMRLTFLSSFDFYGRITAYQLAVLG 218 M A+VD +T+VRVSSVLNR+ K+FG +LFDG DTCWNSDQGSPQWI + ++ +QI FQGGFA ++ + +A G + + F P D NSLQ F L P+P ++ R+ F +S DF+GRIT YQL +LG Sbjct: 1 MTAVVD-----GSTRVRVSSVLNRDTKQFGKKYLFDGEEDTCWNSDQGSPQWIHINLDSDCNVEEVQIKFQGGFAGKDCCL---------------------------------------------EAHNGEEIQK------IMDFYPEDINSLQIFKL--------------------------PQPLKMSSFRIVFTNSTDFFGRITIYQLMILG 135
BLAST of NO12G00880 vs. NCBI_GenBank
Match: XP_013405497.1 (nuclear receptor 2C2-associated protein [Lingula anatina]) HSP 1 Score: 103.2 bits (256), Expect = 1.100e-18 Identity = 70/201 (34.83%), Postives = 85/201 (42.29%), Query Frame = 0 Query: 17 RVSSVLNRNVKEFGVAHLFDGSPDTCWNSDQGSPQWIWLQFQRPVHIHTIQIMFQGGFAAEEMQVGVTFHTPLSPXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPFTLFEDATAGVRPKTKAASDLVTSFCPNDDNSLQSFHLSEPIAVTAAALAVGEAGRAAIEAAAAPKPPMVTDMRLTFLSSFDFYGRITAYQLAVLG 218 RVSSVLNR+VK+FG L DG +TCWNSDQGSPQW+ L+F + V I + I FQGGFA +E V V FT +T P D N LQ F L+ P PP V+ +R+ F SS DFYGRIT Y+L V+G Sbjct: 13 RVSSVLNRDVKQFGKKFLLDGDDETCWNSDQGSPQWVLLEFSKQVVIEELHIQFQGGFAGKECHVQVA-------------------------------SIESDEFT------------------ELTKIFPEDSNKLQVFTLT-------------------------PAPP-VSKLRIVFTSSTDFYGRITIYKLDVIG 138
BLAST of NO12G00880 vs. NCBI_GenBank
Match: XP_006814006.1 (PREDICTED: nuclear receptor 2C2-associated protein-like [Saccoglossus kowalevskii]) HSP 1 Score: 100.9 bits (250), Expect = 5.300e-18 Identity = 63/204 (30.88%), Postives = 88/204 (43.14%), Query Frame = 0 Query: 14 TKVRVSSVLNRNVKEFGVAHLFDGSPDTCWNSDQGSPQWIWLQFQRPVHIHTIQIMFQGGFAAEEMQVGVTFHTPLSPXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPFTLFEDATAGVRPKTKAASDLVTSFCPNDDNSLQSFHLSEPIAVTAAALAVGEAGRAAIEAAAAPKPPMVTDMRLTFLSSFDFYGRITAYQLAVLG 218 +K++VSS LNR+VK+FG ++FD +TCWNSDQGSPQW+ ++F + + + I FQGGF +E + +D T TK + F P D NSLQSFHL P + T +++ F SS DFYGRIT Y+L ++G Sbjct: 10 SKIKVSSTLNRDVKQFGKKYMFDDDEETCWNSDQGSPQWVVMEFPHQIRLQELMIQFQGGFVGKECWIE----------------------------------------GCHDDET-----MTK-----ILDFYPEDVNSLQSFHL--------------------------PTDQLFTKVKIIFNSSTDFYGRITIYKLDLIG 137
BLAST of NO12G00880 vs. NCBI_GenBank
Match: XP_012671047.1 (PREDICTED: nuclear receptor 2C2-associated protein [Clupea harengus]) HSP 1 Score: 100.5 bits (249), Expect = 7.000e-18 Identity = 63/206 (30.58%), Postives = 89/206 (43.20%), Query Frame = 0 Query: 12 TTTKVRVSSVLNRNVKEFGVAHLFDGSPDTCWNSDQGSPQWIWLQFQRPVHIHTIQIMFQGGFAAEEMQVGVTFHTPLSPXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPFTLFEDATAGVRPKTKAASDLVTSFCPNDDNSLQSFHLSEPIAVTAAALAVGEAGRAAIEAAAAPKPPMVTDMRLTFLSSFDFYGRITAYQLAVLG 218 ++T+ RVSSVLNR+VK+FG ++FD + +TCWNSDQG QW++L+F + V + +++ FQGGF+ + FH L L+T F P DDNSLQSF + E P V M++ F +S DF+GRI Y L +LG Sbjct: 19 SSTQSRVSSVLNRDVKQFGKKYMFDSNEETCWNSDQGDAQWVFLEFPQSVRVTELRLQFQGGFSGRTCR----FHGCLQDNDFA----------------------------------------------LITDFYPEDDNSLQSFPIQE--------------------------APPVHKMKIVFENSADFFGRIIIYSLDILG 148
BLAST of NO12G00880 vs. NCBI_GenBank
Match: XP_016611789.1 (hypothetical protein SPPG_01206 [Spizellomyces punctatus DAOM BR117] >KND03750.1 hypothetical protein SPPG_01206 [Spizellomyces punctatus DAOM BR117]) HSP 1 Score: 100.5 bits (249), Expect = 7.000e-18 Identity = 72/210 (34.29%), Postives = 96/210 (45.71%), Query Frame = 0 Query: 14 TKVRVSSVLNRNVKEFGVAHLFDGSPDTCWNSDQGSPQWIWLQFQ-RPVHIHTIQIMFQGGFAAEEMQ-VGVTFHTPLSPXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPFTLFEDATAGVRPKTKAASDLVTSFCPNDDNSLQSFHLSEPIAVTAAALAVGEAGRAAIEAAAAPKPPMVTDMRLTFLSSFDFYGRITAYQLAVLGWEQG 222 T +RVSS LNR+VK +G L DG+ +TCWNSDQG+PQ+I + F R V + ++IMFQGGFA +E + VGV H RP+ + DL+ +F P D NSLQ F + E A K P +R+ FL+S DFYGR+T Y+L V+G G Sbjct: 12 TAIRVSSTLNRDVKAYGKHFLTDGNDETCWNSDQGTPQYISMDFSPRSVLVSELRIMFQGGFAGKECKLVGVADHR---------------------------------------------RPEEEQWEDLL-NFYPEDSNSLQVFPIKE----------------------GASKQPW-RKLRVIFLNSTDFYGRVTIYRLEVVGEANG 152
BLAST of NO12G00880 vs. NCBI_GenBank
Match: XP_024074861.1 (nuclear receptor 2C2-associated protein [Terrapene mexicana triunguis] >XP_024074862.1 nuclear receptor 2C2-associated protein [Terrapene mexicana triunguis] >XP_024074863.1 nuclear receptor 2C2-associated protein [Terrapene mexicana triunguis]) HSP 1 Score: 99.8 bits (247), Expect = 1.200e-17 Identity = 64/204 (31.37%), Postives = 88/204 (43.14%), Query Frame = 0 Query: 14 TKVRVSSVLNRNVKEFGVAHLFDGSPDTCWNSDQGSPQWIWLQFQRPVHIHTIQIMFQGGFAAEEMQVGVTFHTPLSPXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPFTLFEDATAGVRPKTKAASDLVTSFCPNDDNSLQSFHLSEPIAVTAAALAVGEAGRAAIEAAAAPKPPMVTDMRLTFLSSFDFYGRITAYQLAVLG 218 T RVSSVLNR+ K+FG H+FDGS +TCWNSDQGS QW+ L+F + V + +QI FQGGFA++ + G R + ++ F P D N+LQSF E M+ +++TF +S DF+GRI Y+L+VLG Sbjct: 11 TVSRVSSVLNRDAKQFGKKHMFDGSEETCWNSDQGSSQWVMLEFPQTVKVSQLQIQFQGGFASQLCTL------------------------------------------------EGGRKGEELVK--ISDFYPEDINALQSFRTEE---------------------------TMLDKLKITFENSTDFFGRIVVYRLSVLG 137
BLAST of NO12G00880 vs. NCBI_GenBank
Match: XP_020824898.1 (nuclear receptor 2C2-associated protein [Phascolarctos cinereus] >XP_020824899.1 nuclear receptor 2C2-associated protein [Phascolarctos cinereus] >XP_020824900.1 nuclear receptor 2C2-associated protein [Phascolarctos cinereus] >XP_020824902.1 nuclear receptor 2C2-associated protein [Phascolarctos cinereus]) HSP 1 Score: 99.4 bits (246), Expect = 1.600e-17 Identity = 65/204 (31.86%), Postives = 92/204 (45.10%), Query Frame = 0 Query: 14 TKVRVSSVLNRNVKEFGVAHLFDGSPDTCWNSDQGSPQWIWLQFQRPVHIHTIQIMFQGGFAAEEMQVGVTFHTPLSPXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPFTLFEDATAGVRPKTKAASDLVTSFCPNDDNSLQSFHLSEPIAVTAAALAVGEAGRAAIEAAAAPKPPMVTDMRLTFLSSFDFYGRITAYQLAVLG 218 T RVSSVLNR+VK+FG HLFD +TCWNSDQGS QW+ L+F +PV + +QI FQGGFA+ + ++ G R + + + + F P D+NSLQSF +++ VT + +++TF +S DF+GRI Y L +LG Sbjct: 12 TVSRVSSVLNRDVKQFGKKHLFDEQDETCWNSDQGSSQWVMLEFPQPVRVSQVQIQFQGGFASRQGRL-----------------------------------------------EGGRRSE---SLEKIGDFYPQDNNSLQSFAVAD---VT------------------------LDKLKVTFENSTDFFGRIIIYHLRILG 138 The following BLAST results are available for this feature:
BLAST of NO12G00880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G00880 ID=NO12G00880|Name=NO12G00880|organism=Nannochloropsis oceanica|type=gene|length=1083bpback to top protein sequence of NO12G00880.2 >NO12G00880.2-protein ID=NO12G00880.2-protein|Name=NO12G00880.2|organism=Nannochloropsis oceanica|type=polypeptide|length=159bpback to top protein sequence of NO12G00880.1 >NO12G00880.1-protein ID=NO12G00880.1-protein|Name=NO12G00880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=227bpback to top Synonyms
Publications
|