NO11G02580, NO11G02580 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G02580 vs. NCBI_GenBank
Match: PFX17463.1 (Signal peptidase complex catalytic subunit SEC11C [Stylophora pistillata]) HSP 1 Score: 226.9 bits (577), Expect = 4.800e-56 Identity = 108/148 (72.97%), Postives = 128/148 (86.49%), Query Frame = 0 Query: 20 RMLLSQSLNLAMIVFSALMIWKGLMFLTKSESPVVVVLSGSMEPAFQRGDILFLNNQDDPIRVGEIVVFKIKDRDIPIVHRVLEVHEKEDGKIELLTKGDNNRVGDRGLYAPGQLWLNREDILGRAAGTLRYLGMVTIILNDYPMLKY 168 R L Q LN AMIV SALMIWKGLM +T SESP+VVVLSGSMEPAFQRGD+LFL N++DPIRVGEIVVFK++ R+IPIVHRVL++HEKE+G I+ LTKGDNN V DRGLYAPGQ+WL R+D++GRA G + Y+GMVTI++NDYP KY Sbjct: 1556 RQLFYQGLNFAMIVSSALMIWKGLMVVTGSESPIVVVLSGSMEPAFQRGDLLFLTNKEDPIRVGEIVVFKVEGREIPIVHRVLKIHEKENGSIKFLTKGDNNSVDDRGLYAPGQMWLERKDVVGRARGFVPYVGMVTILMNDYPKFKY 1703
BLAST of NO11G02580 vs. NCBI_GenBank
Match: XP_022803453.1 (signal peptidase complex catalytic subunit SEC11A-like [Stylophora pistillata]) HSP 1 Score: 226.9 bits (577), Expect = 4.800e-56 Identity = 108/148 (72.97%), Postives = 128/148 (86.49%), Query Frame = 0 Query: 20 RMLLSQSLNLAMIVFSALMIWKGLMFLTKSESPVVVVLSGSMEPAFQRGDILFLNNQDDPIRVGEIVVFKIKDRDIPIVHRVLEVHEKEDGKIELLTKGDNNRVGDRGLYAPGQLWLNREDILGRAAGTLRYLGMVTIILNDYPMLKY 168 R L Q LN AMIV SALMIWKGLM +T SESP+VVVLSGSMEPAFQRGD+LFL N++DPIRVGEIVVFK++ R+IPIVHRVL++HEKE+G I+ LTKGDNN V DRGLYAPGQ+WL R+D++GRA G + Y+GMVTI++NDYP KY Sbjct: 16 RQLFYQGLNFAMIVSSALMIWKGLMVVTGSESPIVVVLSGSMEPAFQRGDLLFLTNKEDPIRVGEIVVFKVEGREIPIVHRVLKIHEKENGSIKFLTKGDNNSVDDRGLYAPGQMWLERKDVVGRARGFVPYVGMVTILMNDYPKFKY 163
BLAST of NO11G02580 vs. NCBI_GenBank
Match: XP_013788579.1 (signal peptidase complex catalytic subunit SEC11A [Limulus polyphemus]) HSP 1 Score: 225.7 bits (574), Expect = 1.100e-55 Identity = 110/160 (68.75%), Postives = 139/160 (86.88%), Query Frame = 0 Query: 9 LSELKKLWRSPRMLLSQSLNLAMIVFSALMIWKGLMFLTKSESPVVVVLSGSMEPAFQRGDILFL-NNQDDPIRVGEIVVFKIKDRDIPIVHRVLEVHEKEDGKIELLTKGDNNRVGDRGLYAPGQLWLNREDILGRAAGTLRYLGMVTIILNDYPMLKY 168 L ++K++ + R L+ Q+LN MIV SALMIWKGLM +T SESP+VVVLSGSMEPAF RGD+LFL N+++DPIRVG+IVVFK++ RDIPIVHRVL++HEKEDG +++LTKGDNN V DRGLYAPGQLWLN++DI+GRA G + Y+G+VTI++NDYP LKY Sbjct: 5 LEDIKRM--NKRQLMYQALNFGMIVSSALMIWKGLMVVTGSESPIVVVLSGSMEPAFHRGDLLFLTNHKEDPIRVGDIVVFKVEGRDIPIVHRVLKLHEKEDGSVKILTKGDNNSVDDRGLYAPGQLWLNKKDIVGRARGFVPYVGIVTILMNDYPKLKY 162
BLAST of NO11G02580 vs. NCBI_GenBank
Match: XP_013789753.1 (signal peptidase complex catalytic subunit SEC11A-like [Limulus polyphemus]) HSP 1 Score: 224.9 bits (572), Expect = 1.800e-55 Identity = 109/160 (68.12%), Postives = 139/160 (86.88%), Query Frame = 0 Query: 9 LSELKKLWRSPRMLLSQSLNLAMIVFSALMIWKGLMFLTKSESPVVVVLSGSMEPAFQRGDILFL-NNQDDPIRVGEIVVFKIKDRDIPIVHRVLEVHEKEDGKIELLTKGDNNRVGDRGLYAPGQLWLNREDILGRAAGTLRYLGMVTIILNDYPMLKY 168 L ++K++ + R L+ Q+LN MIV SALMIWKGLM +T SESP+VVVLSGSMEPAF RGD+LFL N+++DP+RVG+IVVFK++ RDIPIVHRVL++HEKEDG +++LTKGDNN V DRGLYAPGQLWLN++DI+GRA G + Y+G+VTI++NDYP LKY Sbjct: 5 LDDIKRM--NKRQLVYQALNFGMIVSSALMIWKGLMVVTGSESPIVVVLSGSMEPAFHRGDLLFLTNHKEDPVRVGDIVVFKVEGRDIPIVHRVLKLHEKEDGSVKILTKGDNNSVDDRGLYAPGQLWLNKKDIVGRARGFVPYVGIVTILMNDYPKLKY 162
BLAST of NO11G02580 vs. NCBI_GenBank
Match: XP_020608627.1 (signal peptidase complex catalytic subunit SEC11A-like [Orbicella faveolata]) HSP 1 Score: 224.6 bits (571), Expect = 2.400e-55 Identity = 110/149 (73.83%), Postives = 128/149 (85.91%), Query Frame = 0 Query: 20 RMLLSQSLNLAMIVFSALMIWKGLMFLTKSESPVVVVLSGSMEPAFQRGDILFLNN-QDDPIRVGEIVVFKIKDRDIPIVHRVLEVHEKEDGKIELLTKGDNNRVGDRGLYAPGQLWLNREDILGRAAGTLRYLGMVTIILNDYPMLKY 168 R L Q LN AMIV SALMIWKGLM +T SESP+VVVLSGSMEPAFQRGD+LFL N ++DPIRVGEIVVFK++ R+IPIVHRVL++HEKEDG I+ LTKGDNN V DRGLYAPGQLWL R+D++GRA G + Y+GMVTI++NDYP KY Sbjct: 16 RQLFYQGLNFAMIVSSALMIWKGLMVVTGSESPIVVVLSGSMEPAFQRGDLLFLTNYKEDPIRVGEIVVFKVEGREIPIVHRVLKIHEKEDGAIKFLTKGDNNSVDDRGLYAPGQLWLERKDVVGRARGFVPYVGMVTILMNDYPKFKY 164
BLAST of NO11G02580 vs. NCBI_GenBank
Match: XP_003390276.1 (PREDICTED: signal peptidase complex catalytic subunit SEC11C-like [Amphimedon queenslandica]) HSP 1 Score: 224.2 bits (570), Expect = 3.100e-55 Identity = 115/166 (69.28%), Postives = 138/166 (83.13%), Query Frame = 0 Query: 4 IVQGQLSELKKLWRSPRMLLSQSLNLAMIVFSALMIWKGLMFLTKSESPVVVVLSGSMEPAFQRGDILFLNN-QDDPIRVGEIVVFKIKDRDIPIVHRVLEVHEKEDGKIELLTKGDNNRVGDRGLYAPGQLWLNREDILGRAAGTLRYLGMVTIILNDYPMLKYV 169 +V+ L +LKKL + R L Q L+L MIV SALMIWKGLM +T SESP+VVVLSGSMEPAF RGD+LFL N ++DPIR GEIVVFK+KDRDIPIVHRVL VHE +G++ LLTKGDNN+V DRGLYAPGQLW+ R++++GRA G L Y+GMVTII+NDYP LKY+ Sbjct: 2 VVEWILGDLKKL--NKRQLYYQFLSLGMIVSSALMIWKGLMVVTGSESPIVVVLSGSMEPAFFRGDLLFLTNYEEDPIRSGEIVVFKVKDRDIPIVHRVLTVHEDHNGEVYLLTKGDNNQVDDRGLYAPGQLWVKRDEVVGRARGFLPYIGMVTIIMNDYPKLKYL 165
BLAST of NO11G02580 vs. NCBI_GenBank
Match: CEM27628.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 224.2 bits (570), Expect = 3.100e-55 Identity = 112/166 (67.47%), Postives = 129/166 (77.71%), Query Frame = 0 Query: 3 EIVQGQLSELKKLWRSPRMLLSQSLNLAMIVFSALMIWKGLMFLTKSESPVVVVLSGSMEPAFQRGDILFLNNQDDPIRVGEIVVFKIKDRDIPIVHRVLEVHEKEDGKIELLTKGDNNRVGDRGLYAPGQLWLNREDILGRAAGTLRYLGMVTIILNDYPMLKYV 169 + V+ E + L+ PR + Q LNL IVFSALM+WKGLM +T SESPVVVVLSGSMEP F RGDILFLNN D P+ G++VVFKIK RDIPIVHRVLEVHE G +++LTKGDNN V DRGLYAPGQLWLN+ DI+GRA L Y+GMVTI LNDYP LK+V Sbjct: 2 DTVRQYWDEFRALFSKPRQFVQQILNLCCIVFSALMLWKGLMVITGSESPVVVVLSGSMEPGFYRGDILFLNNPDTPVLPGDVVVFKIKGRDIPIVHRVLEVHETGKGDVKILTKGDNNDVDDRGLYAPGQLWLNKSDIMGRAIAFLPYVGMVTIWLNDYPWLKFV 167
BLAST of NO11G02580 vs. NCBI_GenBank
Match: PIK58365.1 (putative signal peptidase complex catalytic subunit SEC11A-like [Apostichopus japonicus]) HSP 1 Score: 223.4 bits (568), Expect = 5.300e-55 Identity = 113/160 (70.62%), Postives = 132/160 (82.50%), Query Frame = 0 Query: 9 LSELKKLWRSPRMLLSQSLNLAMIVFSALMIWKGLMFLTKSESPVVVVLSGSMEPAFQRGDILFLNN-QDDPIRVGEIVVFKIKDRDIPIVHRVLEVHEKEDGKIELLTKGDNNRVGDRGLYAPGQLWLNREDILGRAAGTLRYLGMVTIILNDYPMLKY 168 L E++++ + R L Q LN MIV SALMIWKGLM +T SESP+VVVLSGSMEPAF RGD+LFL N QDDPIRVGEIVVFKI+ RDIPIVHRVL +HEKE+G I+ LTKGDNN V DRGLYAPGQLWL R+D++GRA G + Y+GMVTI++NDYP KY Sbjct: 7 LDEVRRM--NKRQLFYQVLNFGMIVSSALMIWKGLMVVTASESPIVVVLSGSMEPAFYRGDLLFLTNYQDDPIRVGEIVVFKIEGRDIPIVHRVLRLHEKENGDIKFLTKGDNNMVDDRGLYAPGQLWLQRKDVVGRARGYVPYIGMVTILMNDYPKFKY 164
BLAST of NO11G02580 vs. NCBI_GenBank
Match: EKC32404.1 (Signal peptidase complex catalytic subunit SEC11A [Crassostrea gigas]) HSP 1 Score: 222.2 bits (565), Expect = 1.200e-54 Identity = 109/151 (72.19%), Postives = 129/151 (85.43%), Query Frame = 0 Query: 18 SPRMLLSQSLNLAMIVFSALMIWKGLMFLTKSESPVVVVLSGSMEPAFQRGDILFLNN-QDDPIRVGEIVVFKIKDRDIPIVHRVLEVHEKEDGKIELLTKGDNNRVGDRGLYAPGQLWLNREDILGRAAGTLRYLGMVTIILNDYPMLKY 168 +PR L Q LN MIV SALMIWKGLM +T SESP+VVVLSGSMEPAF RGD+LFL N +++PIRVGEIVVFKI+ RDIPIVHRVL+VHEKEDGK++ LTKGDNN V DRGLYAPGQLWL ++D++GRA G + Y+G+VTI++NDYP KY Sbjct: 58 NPRQLYYQVLNFGMIVSSALMIWKGLMVVTGSESPIVVVLSGSMEPAFFRGDLLFLTNYREEPIRVGEIVVFKIEGRDIPIVHRVLKVHEKEDGKVKFLTKGDNNSVDDRGLYAPGQLWLEKKDVVGRARGFVPYVGIVTILMNDYPKFKY 208
BLAST of NO11G02580 vs. NCBI_GenBank
Match: EKC34596.1 (Signal peptidase complex catalytic subunit SEC11A [Crassostrea gigas]) HSP 1 Score: 222.2 bits (565), Expect = 1.200e-54 Identity = 109/151 (72.19%), Postives = 129/151 (85.43%), Query Frame = 0 Query: 18 SPRMLLSQSLNLAMIVFSALMIWKGLMFLTKSESPVVVVLSGSMEPAFQRGDILFLNN-QDDPIRVGEIVVFKIKDRDIPIVHRVLEVHEKEDGKIELLTKGDNNRVGDRGLYAPGQLWLNREDILGRAAGTLRYLGMVTIILNDYPMLKY 168 +PR L Q LN MIV SALMIWKGLM +T SESP+VVVLSGSMEPAF RGD+LFL N +++PIRVGEIVVFKI+ RDIPIVHRVL+VHEKEDGK++ LTKGDNN V DRGLYAPGQLWL ++D++GRA G + Y+G+VTI++NDYP KY Sbjct: 11 NPRQLYYQVLNFGMIVSSALMIWKGLMVVTGSESPIVVVLSGSMEPAFFRGDLLFLTNYREEPIRVGEIVVFKIEGRDIPIVHRVLKVHEKEDGKVKFLTKGDNNSVDDRGLYAPGQLWLEKKDVVGRARGFVPYVGIVTILMNDYPKFKY 161 The following BLAST results are available for this feature:
BLAST of NO11G02580 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
The following polypeptide feature(s) derives from this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G02580 ID=NO11G02580|Name=NO11G02580|organism=Nannochloropsis oceanica|type=gene|length=2223bpback to top protein sequence of NO11G02580.4 >NO11G02580.4-protein ID=NO11G02580.4-protein|Name=NO11G02580.4|organism=Nannochloropsis oceanica|type=polypeptide|length=186bpback to top protein sequence of NO11G02580.3 >NO11G02580.3-protein ID=NO11G02580.3-protein|Name=NO11G02580.3|organism=Nannochloropsis oceanica|type=polypeptide|length=186bpback to top protein sequence of NO11G02580.2 >NO11G02580.2-protein ID=NO11G02580.2-protein|Name=NO11G02580.2|organism=Nannochloropsis oceanica|type=polypeptide|length=169bpback to top protein sequence of NO11G02580.1 >NO11G02580.1-protein ID=NO11G02580.1-protein|Name=NO11G02580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=184bpback to top Synonyms
Publications
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