jgi.p|Nanoce1779_2|591570, gene_5154 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|591570
Unique Namegene_5154
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_12:594217..596309 -

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Properties
Property NameValue
TranscriptId591656
ProteinId591570
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_12supercontigscaffold_12:594217..596309 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008234cysteine-type peptidase activity
GO:0008233peptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006465signal peptide processing
GO:0006508proteolysis
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL010ncniL010Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G02580NO11G02580Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|591570mRNA_5154-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|591570mRNA_5154Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|591570

>mRNA_5154-protein ID=mRNA_5154-protein|Name=jgi.p|Nanoce1779_2|591570|organism=Nannochloropsis oceanica|type=polypeptide|length=169bp
MEEIVQGQLSELKKLWRSPRMLLSQSLNLAMIVFSALMIWKGLMFLTKSE
SPVVVVLSGSMEPAFQRGDILFLNNQDDPIRVGEIVVFKIKDRDIPIVHR
VLEVHEKEDGKIELLTKGDNNRVGDRGLYAPGQLWLNREDILGRAAGTLR
YLGMVTIILNDYPMLKYV*
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Synonyms
Publications