NO11G01360, NO11G01360 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G01360 vs. NCBI_GenBank
Match: EWM25066.1 (transcription elongation factor spt5 [Nannochloropsis gaditana]) HSP 1 Score: 1088.2 bits (2813), Expect = 0.000e+0 Identity = 552/605 (91.24%), Postives = 581/605 (96.03%), Query Frame = 0 Query: 143 ESGDELTEREAEKLRQENLYKPRTRTNFEDMLARDSDHQIEERFRAMARTSAHRTQEFYEEAGARQKGVTKQSLLPTPGVDTCMWRVKVKKNQEMPMVMSIIDMARRMTAKKQRVGITAAIFAGTKGHVLVEARNEADASAAVRANSRFILSQRLEVVEYRYMATSLAVSEKVAPKPLKNGQWVRFKRGLYKGDLARVIAILEGGSKVVIELVPRINYEDMARNPRAGNIYVISAASRPAPKFFSASEAREHEVALHRGKHPGLNMPCDVACNLHYMNGYLVKEVKPESLQMENVNATVEEVTKFGLGALAEDDGRGHEERLEAAQREAEETQEQQRKMLRVFESGDAVKVVAGELRNLVCRVLGSDPTTGTVSVRPVNSNLGLPAKIELQTSQLANHVEVGQHVKVVDGIFAGETGMVQALLVVDENGQQASEPVVSILTDGENKEVRVRLGQVKESAEVATGLSSLSGYALHDMVCYGYQRFGVIVWVGRESVKVLDSSGVLQSVPLGELQGNRNRRSQQAVAYDSMNNRMQVEDQVAVTDRGDHFQKRGTIKHILGSTLWVFTKQEPRNSGLFVVRTRAVTLQNLVRRNAAVTFNALHTGGP 748 ESGDELTEREAEKLRQE LYKPRTRTNFEDMLARDSDHQIEERFRAMARTSAHRTQ+FYEEA ARQKGVTKQSLLPTPGVDTCMWRVKVKKNQEMPMVMSI+DMARRMTAKKQRVGITAAIFAGTKGHVL+EARNEADASAA+RANSRFILSQRLEVVEYRYMATSLAVSEKVAP+PL++GQWVRFKRGLYKGDLARV+AILEGGSKVVIE+VPRINYEDMARNPRAGNIYV+SAASRP PKFFSASEAREHEV LHRGK PGLNMPCDVACNLHYMNGYLVKEVKPESLQ EN+NA+VEEVTKFGLGALAEDDGRGHEERL+AAQREAEETQEQQRK LRVFE GDAVKVVAGELRNLVCRVLGSDPTTGTVSVRPVN NLGLP KIELQ SQLANHVEVGQHVKV+DG+FAGETGMVQALL DE+G EP+VS+LTDGENKE+RVRLGQVKESA+VATG+SSLSGY+LHDMVCYGYQRFGVIVW+GRESVKVLDSSGV+QSVPLGELQGNRNRRS QA AYDSMNNRMQVEDQV VTDRG+HFQKRG IKHILGS+LW+ TKQE RNSGLFVVRTRAVTLQNL+R+NAAVTFNALHTG P Sbjct: 144 ESGDELTEREAEKLRQETLYKPRTRTNFEDMLARDSDHQIEERFRAMARTSAHRTQDFYEEASARQKGVTKQSLLPTPGVDTCMWRVKVKKNQEMPMVMSIMDMARRMTAKKQRVGITAAIFAGTKGHVLIEARNEADASAAIRANSRFILSQRLEVVEYRYMATSLAVSEKVAPRPLRDGQWVRFKRGLYKGDLARVMAILEGGSKVVIEMVPRINYEDMARNPRAGNIYVVSAASRPGPKFFSASEAREHEVVLHRGKIPGLNMPCDVACNLHYMNGYLVKEVKPESLQAENINASVEEVTKFGLGALAEDDGRGHEERLQAAQREAEETQEQQRKNLRVFEQGDAVKVVAGELRNLVCRVLGSDPTTGTVSVRPVNPNLGLPVKIELQASQLANHVEVGQHVKVLDGLFAGETGMVQALLSHDEHGAPVPEPIVSVLTDGENKELRVRLGQVKESADVATGMSSLSGYSLHDMVCYGYQRFGVIVWLGRESVKVLDSSGVVQSVPLGELQGNRNRRSHQAAAYDSMNNRMQVEDQVLVTDRGEHFQKRGAIKHILGSSLWILTKQETRNSGLFVVRTRAVTLQNLIRKNAAVTFNALHTGAP 748
BLAST of NO11G01360 vs. NCBI_GenBank
Match: XP_005852736.1 (transcription initiation protein spt5, partial [Nannochloropsis gaditana CCMP526] >EKU23098.1 transcription initiation protein spt5, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 915.6 bits (2365), Expect = 1.000e-262 Identity = 463/511 (90.61%), Postives = 491/511 (96.09%), Query Frame = 0 Query: 226 MWRVKVKKNQEMPMVMSIIDMARRMTAKKQRVGITAAIFAGTKGHVLVEARNEADASAAVRANSRFILSQRLEVVEYRYMATSLAVSEKVAPKPLKNGQWVRFKRGLYKGDLARVIAILEGGSKVVIELVPRINYEDMARNPRAGNIYVISAASRPAPKFFSASEAREHEVALHRGKHPGLNMPCDVACNLHYMNGYLVKEVKPESLQMENVNATVEEVTKFGLGALAEDDGRGHEERLEAAQREAEETQEQQRKMLRVFESGDAVKVVAGELRNLVCRVLGSDPTTGTVSVRPVNSNLGLPAKIELQTSQLANHVEVGQHVKVVDGIFAGETGMVQALLVVDENGQQASEPVVSILTDGENKEVRVRLGQVKESAEVATGLSSLSGYALHDMVCYGYQRFGVIVWVGRESVKVLDSSGVLQSVPLGELQGNRNRRSQQAVAYDSMNNRMQVEDQVAVTDRGDHFQKRGTIKHILGSTLWVFTKQEPRNSGLFVVRTRAVTLQNLVRRNAA 737 MWRVKVKKNQEMPMVMSI+DMARRMTAKKQRVGITAAIFAGTKGHVL+EARNEADASAA+RANSRFILSQRLEVVEYRYMATSLAVSEKVAP+PL++GQWVRFKRGLYKGDLARV+AILEGGSKVVIE+VPRINYEDMARNPRAGNIYV+SAASRP PKFFSASEAREHEV LHRGK PGLNMPCDVACNLHYMNGYLVKEVKPESLQ EN+NA+VEEVTKFGLGALAEDDGRGHEERL+AAQREAEETQEQQRK LRVFE GDAVKVVAGELRNLVCRVLGSDPTTGTVSVRPVN NLGLP KIELQ SQLANHVEVGQHVKV+DG+FAGETGMVQALL DE+G EP+VS+LTDGENKE+RVRLGQVKESA+VATG+SSLSGY+LHDMVCYGYQRFGVIVW+GRESVKVLDSSGV+QSVPLGELQGNRNRRS QA AYDSMNNRMQVEDQV VTDRG+HFQKRG IKHILGS+LW+FTKQE RNSGLFVVRTRAVTLQNL+R+NAA Sbjct: 1 MWRVKVKKNQEMPMVMSIMDMARRMTAKKQRVGITAAIFAGTKGHVLIEARNEADASAAIRANSRFILSQRLEVVEYRYMATSLAVSEKVAPRPLRDGQWVRFKRGLYKGDLARVMAILEGGSKVVIEMVPRINYEDMARNPRAGNIYVVSAASRPGPKFFSASEAREHEVVLHRGKIPGLNMPCDVACNLHYMNGYLVKEVKPESLQAENINASVEEVTKFGLGALAEDDGRGHEERLQAAQREAEETQEQQRKNLRVFEQGDAVKVVAGELRNLVCRVLGSDPTTGTVSVRPVNPNLGLPVKIELQASQLANHVEVGQHVKVLDGLFAGETGMVQALLSHDEHGAPVPEPIVSVLTDGENKELRVRLGQVKESADVATGMSSLSGYSLHDMVCYGYQRFGVIVWLGRESVKVLDSSGVVQSVPLGELQGNRNRRSHQAAAYDSMNNRMQVEDQVLVTDRGEHFQKRGAIKHILGSSLWIFTKQETRNSGLFVVRTRAVTLQNLIRKNAA 511
BLAST of NO11G01360 vs. NCBI_GenBank
Match: OEU21349.1 (hypothetical protein FRACYDRAFT_224310 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 244.2 bits (622), Expect = 1.300e-60 Identity = 184/567 (32.45%), Postives = 291/567 (51.32%), Query Frame = 0 Query: 180 HQIEERFRAMARTSAHRTQEFYEEAGAR-QKGVTKQSLLPTPGVDTCMWRVKVKKNQEMPMVMSIIDMARRMTAKKQRVGITAAIFAGTKGHVLVEARNEADASAAVRANSRFILSQRLEVVEYRYMATSLAVSEKVAPKPLKNGQWVRFKRGLYKGDLARVIAILEGGSKVVIELVPRINYEDMARNPRAGNIYVISAASRPAPKFFSASE--AREHEVALHRGKHPGLNMPCDVACNLHYMNGYLVKEVKPESLQM----ENVNATVEEVTKF-GLGALAEDDGRGHEERLEAAQREAEETQEQQRK--MLRVFESG-----DAVKVVAGELRNLVCRVLGSDPTTGTVSVRPVNSNLGLPAKIELQTSQLANHVEVGQHVKVVDGIFAGETGMVQALLVVDENGQQASEPVVSILTDGENKEVRVRLGQVKESAEVATGLSSLSGYALHDMVCY----GYQRFGVIVWVGRESVKVLDSSGVLQSVPLGELQGNRNRRSQQAVAYDSMNNRMQVEDQVAVTDRGDHFQKRGTIKHILGSTLWVFTKQEPRNSGLFVVRTRAVTL 728 H + R T+ R QE G V++QSL+P+ D +W + +E MVM I++ + + +GI AI A +KG + +E+ +E A+ R +L + ++ M T + V K KP+K +WVR RG YKGDLA VIA+ E G K +++ VPR++ ++ P I RP KFFS E A + HR + PG+++ CD N +Y +GY++KEV S+ EN ++E+ +F A DDG E + A +E E Q K + + +G D V+VV G+L + +++ D TT + + N+G +IE SQ+ H+ VG HVKVVDG + ETG+V A+ +D + + +LTD NKE+ +R Q++ES+E +G L+GY L+D+V G+IV VGRE V+++ G+ + V EL+G RN S +AVA D N+++ DQV+V + G H K TIK + + ++++++ N+G+FV R+R+ L Sbjct: 170 HNHQRRDTHTTDTARQRHQEDDRPGGPEATNAVSQQSLVPSVS-DPSLWMISCMTGKEQEMVMQIMNKCVAYARQGRPLGICGAIAAQSKGRIYIESYSEPAVVEAI-TGVRGMLQYTMRLIPIGDMTTVMTVVPK--KKPVKKNEWVRMTRGHYKGDLALVIAVRESGLKCIVQCVPRLDLAALSLPPDEARIR--RKTVRPPQKFFSEQELAALGYADRRHRQRFPGMDIYCDSFENNYYHDGYMLKEVTVGSMVKPCTGEN-PPNLDELQQFRKRNKSANDDGNDDNEGSKMAASLLDELSELQGKTSLSKSASNGGLMINDKVEVVEGDLVGMKGKIVSMDATTIKIKPLDASLNIGGTGEIEFLASQVRKHIAVGAHVKVVDGRYTNETGIVVAVEQIDGD----KDFTAVVLTDVTNKEISLRTSQLRESSEQYSGQDKLAGYELYDLVMLSGGGSTNEVGIIVRVGREDFTVINNHGISRDVRPEELRGKRNSTSNRAVALDVQGNQIRCGDQVSVAE-GPHKGKTATIKRLSRAQIFLYSQTRSENAGIFVARSRSCVL 724
BLAST of NO11G01360 vs. NCBI_GenBank
Match: XP_008604075.1 (hypothetical protein SDRG_00380 [Saprolegnia diclina VS20] >EQC42652.1 hypothetical protein SDRG_00380 [Saprolegnia diclina VS20]) HSP 1 Score: 238.0 bits (606), Expect = 9.600e-59 Identity = 194/612 (31.70%), Postives = 310/612 (50.65%), Query Frame = 0 Query: 148 LTEREAEKLRQEN-----LYKPRTRTNFEDMLARDSDHQIEERFRAMARTSAHRTQEFYEEAGARQKGVTKQSLLPTPGVDTCMWRVKVKKNQEMPMVMSIIDMARRMTAKKQRVGITAAIFAGTKGHVLVEARNEADASAAVRANSRFILSQRLEVVEYRYMATSLAVSEKVAPKPLKNGQWVRFKR-GLYKGDLARVIAILEGGSKVVIELVPRINYEDMARNPRAGNIYVISAASRPAPKFFSASEAREHEVALHRGKHPGLNMPCDVACNLHYMNGYLVKEVKPES-LQMENVNATVEEVTKFGLGALAEDDGR-GHEERLEAAQREAEETQEQQRKMLRVFESGDAVKVVAGELRNLVCRVLGSDPTTGTVSVRPVNSNLGLPAKIELQTSQLANHVEVGQHVKVVDGIFAGETGMVQALLVVDENGQQASEPVVSILTDGENKEVRVRLGQVKESAEVATGLSSLSGYALHDMVCYGYQRFGVIVWVGRESVKVLDSSGVLQSVPLGELQGNRNRRSQQAVAYDSMNNRMQVEDQVAVTDRGDHFQKRGTIKHILGSTLWVFTKQEPRNSGLFVVRTRAVTLQNLVRRNAAVTFNALHTGGPVRGG 752 L E+E E L E+ ++ R N +++ A D +++R + RT+ E E Q V +QSLLP+ D +W K K +E +V+S+++ + + + I + I + +KG + VE+ E A AV R I S +++V M + L + +K P+ G W RFKR GLYKGDL +VI I++ G + +++ VPR++ + G RPA K F+ +V+ R +HP N DV N + +G+L KEV + L ++ VN T+EE+ KF + A + D H +L+ +A + + K GD V+V+ G+L NL+ V+G++ TV V P++ + ++ Q QL V++G H+KVV G ++GETG V + +DE+ PV IL D + KE++VR+ ++ESAEV+ GL SL G L+D+V + GVI VGR+ VL +G +S+ E+Q R S + A D N + V + V D G + GTIKHI S +++ + N+G+F+VR R + + ++ A+ A GGP GG Sbjct: 84 LAEQEGEDLGDESRHQYQSHRNRAAFNEDNLSAEDYIEGLKKRHKQSRRTNDDGDVESEE---IMQSAVAQQSLLPSI-QDPRLWVFKCKPGREQHLVLSLMNKFLEFEKRGESLNIKSVIASNSKGFIYVESDREPFAKEAVN-GLRDIQSWSMKLVPIHEMTSVLTIQKK--KTPVVAGVWARFKRAGLYKGDLCKVIEIVDNGLRAIVKHVPRLDSSVL----NGGEPTKFKKGQRPALKLFAPGAVHSSDVS--RKRHPLTNEMMDVYDNDWFKDGFLYKEVNISTMLSVDEVNPTLEEINKFSVSADGDSDNESSHVSKLDLGDVDAWKNKVDLTK-------GDTVRVIEGDLINLMGVVVGTNSGNDTVRVMPLHEEI-KDTILDFQLKQLMKIVKIGAHIKVVSGRYSGETGTV---VSIDES---MGAPVAIILVDTQAKEIQVRVRDIQESAEVSQGLDSLKGKELYDLVALPHGEVGVITHVGRDGFTVLGQNGQPKSIADQEIQ--RKLFSSRVSALDKKGNHISVGEMAQVVD-GPFAGQTGTIKHIYRSYIFLHNNRVTSNAGIFLVRNRQIEIAGDKVKSYAM--GASSFGGPSGGG 663
BLAST of NO11G01360 vs. NCBI_GenBank
Match: XP_012208854.1 (hypothetical protein SPRG_14336 [Saprolegnia parasitica CBS 223.65] >KDO20464.1 hypothetical protein SPRG_14336 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 238.0 bits (606), Expect = 9.600e-59 Identity = 194/612 (31.70%), Postives = 310/612 (50.65%), Query Frame = 0 Query: 148 LTEREAEKLRQEN-----LYKPRTRTNFEDMLARDSDHQIEERFRAMARTSAHRTQEFYEEAGARQKGVTKQSLLPTPGVDTCMWRVKVKKNQEMPMVMSIIDMARRMTAKKQRVGITAAIFAGTKGHVLVEARNEADASAAVRANSRFILSQRLEVVEYRYMATSLAVSEKVAPKPLKNGQWVRFKR-GLYKGDLARVIAILEGGSKVVIELVPRINYEDMARNPRAGNIYVISAASRPAPKFFSASEAREHEVALHRGKHPGLNMPCDVACNLHYMNGYLVKEVKPES-LQMENVNATVEEVTKFGLGALAEDDGR-GHEERLEAAQREAEETQEQQRKMLRVFESGDAVKVVAGELRNLVCRVLGSDPTTGTVSVRPVNSNLGLPAKIELQTSQLANHVEVGQHVKVVDGIFAGETGMVQALLVVDENGQQASEPVVSILTDGENKEVRVRLGQVKESAEVATGLSSLSGYALHDMVCYGYQRFGVIVWVGRESVKVLDSSGVLQSVPLGELQGNRNRRSQQAVAYDSMNNRMQVEDQVAVTDRGDHFQKRGTIKHILGSTLWVFTKQEPRNSGLFVVRTRAVTLQNLVRRNAAVTFNALHTGGPVRGG 752 L E+E E L E+ ++ R N +++ A D +++R + RT+ E E Q V +QSLLP+ D +W K K +E +V+S+++ + + + I + I + +KG + VE+ E A AV R I S +++V M + L + +K P+ G W RFKR GLYKGDL +VI I++ G + +++ VPR++ + G RPA K F+ +V+ R +HP N DV N + +G+L KEV + L ++ VN T+EE+ KF + A + D H +L+ +A + + K GD V+V+ G+L NL+ V+G++ TV V P++ + ++ Q QL V++G H+KVV G ++GETG V + +DE+ PV IL D + KE++VR+ ++ESAEV+ GL SL G L+D+V + GVI VGR+ VL +G +S+ E+Q R S + A D N + V + V D G + GTIKHI S +++ + N+G+F+VR R + + ++ A+ A GGP GG Sbjct: 84 LAEQEGEDLGDESRHQYQSHRNRAAFNEDNLSAEDYIEGLKKRHKQSRRTNDDGDVESEE---IMQSAVAQQSLLPSI-QDPRLWVFKCKPGREQHLVLSLMNKFLEFEKRGESLNIKSVIASNSKGFIYVESDREPFAKEAVN-GLRDIQSWSMKLVPIHEMTSVLTIQKK--KTPVVAGVWARFKRAGLYKGDLCKVIEIVDNGLRAIVKHVPRLDSSVL----NGGEPTKFKKGQRPALKLFAPGAVHSSDVS--RKRHPLTNEMMDVYDNDWFKDGFLYKEVNISTMLSVDEVNPTLEEINKFSVSADGDSDNESSHVSKLDLGDVDAWKNKVDLTK-------GDTVRVIEGDLINLMGVVVGTNSGNDTVRVMPLHEEI-KDTILDFQLKQLMKIVKIGAHIKVVSGRYSGETGTV---VSIDES---MGAPVAIILVDTQAKEIQVRVRDIQESAEVSQGLDSLKGKELYDLVALPHGEVGVITHVGRDGFTVLGQNGQPKSIADQEIQ--RKLFSSRVSALDKKGNHISVGEMAQVVD-GPFAGQTGTIKHIYRSYIFLHNNRVTSNAGIFLVRNRQIEIAGDKVKSYAM--GASSFGGPSGGG 663
BLAST of NO11G01360 vs. NCBI_GenBank
Match: CBJ28655.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 237.7 bits (605), Expect = 1.200e-58 Identity = 173/547 (31.63%), Postives = 287/547 (52.47%), Query Frame = 0 Query: 211 VTKQSLLPTPGV-DTCMWRVKVKKNQEMPMVMSIIDMARRMTAKKQRVGITAAIF-AGTKGHVLVEARNEADASAAVRANSRFILSQRLEVVEYRYMATSLAVSEKVAPKPLKNGQWVRFKRGLYKGDLARVIAILEGGSKVVIELVPRINYEDMARNPRAGNIYVISAASRPAPKFFSASEARE--HEVALHRGKHPGLNMPCDVACNLHYMNGYLVKEVKPES-LQMENVNATVEEVTKF-----------GLGALAEDDGRGHEERLEAAQREAEETQEQQRKMLRVFESGDAVKVVAGELRNLVCRVL-----GSDPTTGTVSVRPVNSNLGLPAKIELQTSQLANHVEVGQHVKVVDGIFAGETGMVQALLVVDENGQQASEPVVSILTDGENKEVRVRLGQVKESAEVATGLSSLSGYALHDMVCYGYQRFGVIVWVGRESVKVLDSSGVLQSVPLGELQGNRNRRSQQAVAYDSMNNRMQVEDQVAVTDRGDHFQKRGTIKHILGSTLWVFTKQEPRNSGLFVVRTRAVTLQNLVRRNAA 737 V +Q+LL PG+ D ++ V+ K +E + +S+++ A A Q G+T+A+ AGTKG + +EA+NE AA+ R I +L V M L+V KP++ Q++R KR Y DLA+V+ +L GG + V++ +PRI+ ++ + N + RP +FF+ E ++ E + R + G D N ++NG++VKEV + L+ + VN T+EE+ +F E + A + +F GD V VV G+L +L+ RVL G V ++P+ L +EL+ QL +++VG HV+++DG F GETG +L + +N AS +V LTD +KE+ +++E+ EV+TGL SL GY L+D+V G GV+ V RE ++V+++SG ++ V E++G RN +S++A D+ N+++V++ V V + G H +GTIKHI +TL++ ++ +N+G+F VR R+ L + R A Sbjct: 147 VAQQALL--PGISDKSLFVVECKTGKETSLCLSVMNKALAFKANGQPFGVTSAVVPAGTKGFLYLEAQNEPAVKAAIN-GLRGIYHSKLRKVPIPDMTAVLSVRSATRAKPVRQNQFIRLKRKPYTDDLAKVVEVLAGGERAVVQFIPRIDLVSLSADAETRN---ARKSLRPPQRFFNPEEIKQASDEAMVDRRRFQGHGDHMDYFQNNFFLNGFVVKEVNVSTWLRADRVNPTLEEIQRFKSRRXXXXXXXXXXXXXXXXXXXXXXXTEIMEDLAMAQAMEPTSDAPLFSKGDTVVVVKGDLTDLMGRVLRVRQTGQSQADAVVHIQPLVEELA-DEVVELKPDQLEKYIKVGGHVRIIDGRFTGETG---TILKIVKNPDGASRAMV--LTDMSSKEL-----ELQETPEVSTGLDSLQGYELYDLVMLGPNEVGVVTRVNREDLEVVNNSGNVKRVRPQEIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVE-GQHAGSKGTIKHIDRTTLFLHSRTHTQNAGIFPVRARSALLAGRMNRGQA 675
BLAST of NO11G01360 vs. NCBI_GenBank
Match: CCI39674.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 237.7 bits (605), Expect = 1.200e-58 Identity = 193/597 (32.33%), Postives = 300/597 (50.25%), Query Frame = 0 Query: 152 EAEKLRQENLYKPRTRTNFEDMLARDSDHQIEERFRAMARTSAHRTQEFYEE----AGARQKGVTKQSLLPTPGVDTCMWRVKVKKNQEMPMVMSIIDMARRMTAKKQRVGITAAIFAGTKGHVLVEARNEADASAAVRANSRFILSQRLEVVEYRYMATSLAVSEKVAPKPLKNGQWVRFKR-GLYKGDLARVIAILEGGSKVVIELVPRINYEDMARNPRAGNIYVISAASRPAPKFFSASEAREHEVALHRGKHPGLNMPCDVACNLHYMNGYLVKEVKPE-SLQMENVNATVEEVTKFGLGALAEDDGRGHEERLEAAQREAEETQEQQRKMLRVFESGDAVKVVAGELRNLVCRVLGSDPTTGTVSVRPVNSNLGLPAKIELQTSQLANHVEVGQHVKVVDGIFAGETGMVQALLVVDENGQQASEPVVSILTDGENKEVRVRLGQVKESAEVATGLSSLSGYALHDMVCYGYQRFGVIVWVGRESVKVLDSSGVLQSVPLGELQGNRNRRSQQAVAYDSMNNRMQVEDQVAVTDRGDHFQKRGTIKHILGSTLWVFTKQEPRNSGLFVVRTRAVTLQNLVRRNAAVTFNAL 743 EAE Q Y+PR R ++E + D Q E + + R+Q+ Y+E A Q V +QSLLP+ D MW K K +E +V+S+++ + + Q + I + I + +KG + VEA E A AV R I +++V + M + L V +K KPL G W R KR G++KGDL +V+ ++ G++ +I++VPR + ++ G RP K ++ V R ++P D N +Y +G+LVKEV LQ + VN ++E+ KF A EDD G++E L + ET + + K+ GD V+VV G+L NL+ V+ ++ V V P++ + ++ Q QL +V+VG H+KVV G+++GETG V A V D +G PV +L D KE++VR+ ++ESAE++ GL SL G L+D+V GV+ VGR+ KV + V E+Q R S +A A D +N + V + V V + GDH GT+KHI L++ + N+G+FV R V L R+ + + L Sbjct: 90 EAEVANQSYQYEPRRRMDYE-----EDDEQSAEAIVSSIKKRHQRSQKHYDEVDEGVDAMQSEVAQQSLLPSI-QDPRMWVFKCKPGREQHLVISLMNKFLDLARQGQPLSIKSVIASSSKGFIYVEAEREPHAKDAVN-GLRDISQHTMKLVPVQEMTSVLNVQKK--RKPLAVGAWARIKRAGVFKGDLCKVLESVDNGARAIIKMVPRHDPSVLS----GGEAQKYKKGQRPPQKLLHSNMVHGDIV---RRRYPATGEMMDFFDNDYYQDGFLVKEVNINMMLQTDEVNPRLDEINKFAAVAEREDD--GNQELLASM-----ETGDWKNKV--ELAKGDTVRVVEGDLVNLMGIVVSTNTANDIVRVMPLHEEI-KDTILDFQVRQLIKYVKVGDHIKVVSGMYSGETGTVVA--VDDSDG----APVAIVLVDSMAKEIQVRVQDLQESAEISHGLDSLKGIELYDLVALAQGDVGVVTHVGRDGFKVFTQGDQVCQVSDQEIQ--RKLPSSRAAALDQKHNYVSVGEMVNVLE-GDHAGHAGTVKHIHRCFLFLHNNRVMTNAGMFVARAHQVILSGSKARSNMIQNSTL 651
BLAST of NO11G01360 vs. NCBI_GenBank
Match: GAX98679.1 (transcription elongation factor SPT5, putative [Pythium insidiosum]) HSP 1 Score: 237.3 bits (604), Expect = 1.600e-58 Identity = 185/551 (33.58%), Postives = 286/551 (51.91%), Query Frame = 0 Query: 208 QKGVTKQSLLPTPGVDTCMWRVKVKKNQEMPMVMSIIDMARRMTAKKQRVGITAAIFAGTKGHVLVEARNEADASAAVRANSRFILSQRLEVVEYRYMATSLAVSEKVAPKPLKNGQWVRFKR-GLYKGDLARVIAILEGGSKVVIELVPRINYEDMARNPRAGNIYVISAASRPAPKFFSASEAREHEVALHRGKHPGLNMPCDVACNLHYMNGYLVKEVK-PESLQMENVNATVEEVTKF--GLGALAEDDGRGHEERLEAAQREAEETQEQQRKMLRVFESGDAVKVVAGELRNLVCRVLGSDPTTGTVSVRPVNSNLGLPAKIELQTSQLANHVEVGQHVKVVDGIFAGETGMVQALLVVDENGQQASEPVVSILTDGENKEVRVRLGQVKESAEVATGLSSLSGYALHDMVCYGYQRFGVIVWVGRESVKVLDSSGVLQSVPLGELQGNRNRRSQQAVAYDSMNNRMQVEDQVAVTDRGDHFQKRGTIKHILGSTLWVFTKQEPRNSGLFVVRTRAVTLQNLVRRNAAVTFNAL--HTGGPVRGGV 753 Q V +QSLLP+ D MW K K +E +V+++++ + + + + I + + + +KG + VEA E A AV R I+ +++V M + L V +K KP+ G W RFKR GLYKGDL +V+ IL+ GS+ ++++VPRI+ + G RP K F+A + H+ R +HP D N +Y +G+L+KEV LQ E VN T++E+ KF +G DD AA +A++ + + GD V+V+ G+L NL+ V+ ++ TV V P++ + ++ Q QL +V+VG H+KVV G ++GETG V A V D +G P+ +L D KE++VR+ ++ESAEV+ GL S G L+DMV + GVI VGRE KVL +G +++ E+Q R S +AVA D +N + V + V V D G GT+KHI + L++ + N+G+FV R R V L R+ + + + G P R G+ Sbjct: 155 QSEVAQQSLLPSI-QDPRMWVFKCKPGREQHLVIALMNKFLDFSRRGEPLHIKSVVASSSKGFIYVEAEREPHAKEAVN-GLRDIMQYSMKLVPVHEMTSVLNVKKK--RKPVVAGTWARFKRAGLYKGDLCKVMEILDNGSRAMVKMVPRIDPAVLG----GGEPQKYKKGQRPPQKLFNA-QLSHHD---GRRRHPTTGEMMDFFENDYYKDGFLIKEVNIVTMLQTEEVNPTLDEINKFSSAVGESGADD--------VAAPVDADDWKNRVD-----LTKGDTVRVIEGDLINLMGVVVSTNTANDTVRVMPLHEEI-KDTILDFQMKQLMKYVKVGDHIKVVSGRYSGETGTVVA--VDDTDG----APIAIVLVDSMAKEIQVRVRDLQESAEVSHGLDSYKGKELYDMVALAHGDVGVITHVGREGFKVLCQNGQARNISDQEIQ--RKLVSSRAVALDQKHNHVSVGEMVGVVD-GPFAGHSGTVKHIYRTYLFLHNNRIMTNAGIFVARARQVILSGSKARSDMIQNSTIAGADGRPTRAGM 670
BLAST of NO11G01360 vs. NCBI_GenBank
Match: CCA15669.1 (transcription elongation factor SPT5 putative [Albugo laibachii Nc14] >CCA16267.1 transcription elongation factor SPT5 putative [Albugo laibachii Nc14]) HSP 1 Score: 234.6 bits (597), Expect = 1.100e-57 Identity = 189/597 (31.66%), Postives = 299/597 (50.08%), Query Frame = 0 Query: 152 EAEKLRQENLYKPRTRTNFEDMLARDSDHQIEERFRAMARTSAHRTQEFYEE----AGARQKGVTKQSLLPTPGVDTCMWRVKVKKNQEMPMVMSIIDMARRMTAKKQRVGITAAIFAGTKGHVLVEARNEADASAAVRANSRFILSQRLEVVEYRYMATSLAVSEKVAPKPLKNGQWVRFKR-GLYKGDLARVIAILEGGSKVVIELVPRINYEDMARNPRAGNIYVISAASRPAPKFFSASEAREHEVALHRGKHPGLNMPCDVACNLHYMNGYLVKEVKPE-SLQMENVNATVEEVTKFGLGALAEDDGRGHEERLEAAQREAEETQEQQRKMLRVFESGDAVKVVAGELRNLVCRVLGSDPTTGTVSVRPVNSNLGLPAKIELQTSQLANHVEVGQHVKVVDGIFAGETGMVQALLVVDENGQQASEPVVSILTDGENKEVRVRLGQVKESAEVATGLSSLSGYALHDMVCYGYQRFGVIVWVGRESVKVLDSSGVLQSVPLGELQGNRNRRSQQAVAYDSMNNRMQVEDQVAVTDRGDHFQKRGTIKHILGSTLWVFTKQEPRNSGLFVVRTRAVTLQNLVRRNAAVTFNAL 743 EAE Q Y+PR R ++E + D Q E + + R+Q+ ++E Q V +QSLLP+ D MW K K +E +V+S+++ + + Q + I + I + +KG + VEA E+ A AV R I +++V + M + L + +K KPL G W R KR G++KGD+ +V+ I++ G++ +I+++PR++ +A G RP K + V R ++P D N +Y +G+L+KEV LQ E VN ++E+ KF A EDD G++E L + ET + + K+ GD V+VV G+L NL+ V+ ++ V V P++ + ++ Q QL +V+VG H+KVV G+++GETG V A V D G PV +L D KE++VR+ ++ESAE++ GL SL G L+D+V GV+ VGR+ KV + V E+Q R S +A A D +N + V + V V + G H GT+KHI L++ + N+G+FV R V L R+ + + L Sbjct: 90 EAEIANQSYQYEPRRRMDYE-----EDDEQSAEAIVSSIKKRHQRSQKNFDEVDEGVDTMQSEVAQQSLLPSI-QDPRMWVFKCKPGREQHLVISLMNKYLDLARQGQPLFIKSVIASSSKGFIYVEAERESHAKDAVN-GLRDISLHTMKLVPVQEMTSVLNLQKK--RKPLAVGAWARIKRAGVFKGDICKVLEIVDNGARAIIKMIPRLDPSVLA----GGEAQKFKKGQRPPQKLLHTNMVHGDVV---RRRYPATGEMMDFYDNDYYQDGFLIKEVNINMMLQTEEVNPRLDEINKFAAVAEREDD--GNQELLASM-----ETGDWKNKV--ELAKGDTVRVVEGDLLNLMGIVVSTNTANNLVRVMPLHEEI-KDTILDFQVKQLIKYVKVGDHIKVVSGMYSGETGTVVA--VDDTEG----APVAIVLVDSMAKEIQVRVQDLQESAEISHGLDSLKGIELYDLVALAQGDVGVVTHVGRDGFKVYTQGDQVCQVSDQEIQ--RKLASSRAAALDQKHNYVSVGEMVNVLE-GSHAGHAGTVKHIHRCFLFLHNNRVMTNAGMFVARAHQVILSGSKARSNMIQNSTL 651
BLAST of NO11G01360 vs. NCBI_GenBank
Match: OQR90491.1 (transcription elongation factor SPT5, partial [Thraustotheca clavata]) HSP 1 Score: 231.5 bits (589), Expect = 9.000e-57 Identity = 174/548 (31.75%), Postives = 282/548 (51.46%), Query Frame = 0 Query: 202 EEAGARQKGVTKQSLLPTPGVDTCMWRVKVKKNQEMPMVMSIIDMARRMTAKKQRVGITAAIFAGTKGHVLVEARNEADASAAVRANSRFILSQRLEVVEYRYMATSLAVSEKVAPKPLKNGQWVRFKR-GLYKGDLARVIAILEGGSKVVIELVPRINYEDMARNPRAGNIYVISAASRPAPKFFSASEAREHEVALHRGKHPGLNMPCDVACNLHYMNGYLVKEVK-PESLQMENVNATVEEVTKFGLGALAEDDG-RGHEERLEAAQREAEETQEQQRKMLRVFESGDAVKVVAGELRNLVCRVLGSDPTTGTVSVRPVNSNLGLPAKIELQTSQLANHVEVGQHVKVVDGIFAGETGMVQALLVVDENGQQASEPVVSILTDGENKEVRVRLGQVKESAEVATGLSSLSGYALHDMVCYGYQRFGVIVWVGRESVKVLDSSGVLQSVPLGELQGNRNRRSQQAVAYDSMNNRMQVEDQVAVTDRGDHFQKRGTIKHILGSTLWVFTKQEPRNSGLFVVRTRAVTLQNLVRRNAAVTFNALHTGG 747 E G Q V +QSLLP+ D +W K K +E +V+++++ + + + I + + + +KG + VE+ E A AV R I +++V M L + +K P+ G W RFKR GLYKGDL +VI I++ G + +++ VPR++ ++ G RPA K F+AS EV+ R +HP N D N + +G+L KEV L +++VN T+EE+ KF A+ D + H +L+ +A + + K GD VKV+ G+L NL+ V+G++ TV V P++ + ++ QL V+VG H+KV+ G ++GETG V + +DE+ PV IL D + KE++VR+ ++ESAEV+ GL SL G L+D+V + GVI VGR+ VL +G +++ E+Q R S + A D N + V + V D G + + GTIKHI S +++ + N+G+F+VR + + + ++ A+ + T G Sbjct: 146 ESEGVMQSAVAQQSLLPSI-QDPRLWVFKCKPGREQHLVLALMNKFLEFEKRGESLNIKSVVASSSKGFIYVESDREPFAKEAVN-GLRDIQQWSMKLVPIHEMTAVLTIHKK--KTPIVAGVWARFKRAGLYKGDLCKVIEIVDNGLRAIVKHVPRLDPSVLS----GGEPTKYKKGQRPALKLFAASSVSGPEVS--RKRHPLTNEMMDTYDNDWFKDGFLFKEVNIATMLSVDDVNPTLEEINKFSSAPDADSDNEQSHVAKLDLGDVDAWKNKVDLTK-------GDTVKVIEGDLVNLMGVVVGTNAGNDTVRVMPLHEEI-KDTILDFSVKQLVKIVKVGAHIKVISGRYSGETGTV---VSIDES---MGAPVAIILVDTQAKEIQVRVRDIQESAEVSQGLDSLKGKELYDLVALPHGEVGVITHVGRDGFTVLGQNGQPKTIADQEIQ--RKLYSARVSALDKKGNHISVGEMAQVVD-GPYVGQTGTIKHIYRSYVFLHNNRVANNAGIFLVRNKQIEIAGEKVKSYAMGGTGVSTAG 666 The following BLAST results are available for this feature:
BLAST of NO11G01360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G01360 ID=NO11G01360|Name=NO11G01360|organism=Nannochloropsis oceanica|type=gene|length=2387bpback to top protein sequence of NO11G01360.1 >NO11G01360.1-protein ID=NO11G01360.1-protein|Name=NO11G01360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=777bpback to top Synonyms
Publications
|