NO11G01160, NO11G01160 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G01160 vs. NCBI_GenBank
Match: XP_005856296.1 (ran protein binding protein, partial [Nannochloropsis gaditana CCMP526] >EKU20076.1 ran protein binding protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 158.7 bits (400), Expect = 6.500e-35 Identity = 81/110 (73.64%), Postives = 93/110 (84.55%), Query Frame = 0 Query: 46 VRKPTPEKVGRKFILAYYPVMSKSAEELIKFYKEDSSFSHTNIAEVTEGQDNKPAYGLDQIRARIDALDLGGAVVDITSVDVQSSKDGAVLILVQGVMTRRGGKPPRAFV 156 V+KPTPEKVGR+F+L YYPVMSKSAE+LIKFYKEDS FSH + E EGQD+K A GL++IRARI+AL+LGGAVVDI SVDVQ SKDGAVL+LVQG+M RR P AFV Sbjct: 36 VKKPTPEKVGRRFVLTYYPVMSKSAEDLIKFYKEDSCFSH--VPETEEGQDSKAAVGLEEIRARIEALNLGGAVVDIRSVDVQPSKDGAVLVLVQGLMRRRSAPAPSAFV 143
BLAST of NO11G01160 vs. NCBI_GenBank
Match: EWM25128.1 (ran protein binding protein [Nannochloropsis gaditana]) HSP 1 Score: 158.7 bits (400), Expect = 6.500e-35 Identity = 81/110 (73.64%), Postives = 93/110 (84.55%), Query Frame = 0 Query: 46 VRKPTPEKVGRKFILAYYPVMSKSAEELIKFYKEDSSFSHTNIAEVTEGQDNKPAYGLDQIRARIDALDLGGAVVDITSVDVQSSKDGAVLILVQGVMTRRGGKPPRAFV 156 V+KPTPEKVGR+F+L YYPVMSKSAE+LIKFYKEDS FSH + E EGQD+K A GL++IRARI+AL+LGGAVVDI SVDVQ SKDGAVL+LVQG+M RR P AFV Sbjct: 32 VKKPTPEKVGRRFVLTYYPVMSKSAEDLIKFYKEDSCFSH--VPETEEGQDSKAAVGLEEIRARIEALNLGGAVVDIRSVDVQPSKDGAVLVLVQGLMRRRSAPAPSAFV 139 HSP 2 Score: 88.2 bits (217), Expect = 1.100e-13 Identity = 52/102 (50.98%), Postives = 63/102 (61.76%), Query Frame = 0 Query: 505 LGTHQDELCALLLGMAVEGDSVLSYKVNKSQFSVFVEFEKPESVARIMAASRAEPKRFFLVNSVQGRSRFNLYLDVKRPPGQPGVSHVMGSREGGF-RVVGG 606 LG H+ EL ALL+G+ G V Y+VNKSQ+SVFVE ESVAR+M RA+PKRF L + + L+LDVKRPPGQ G R GG R +GG Sbjct: 244 LGMHEAELTALLVGVGGAGTVVRDYRVNKSQYSVFVELGDAESVARVMGVVRADPKRFHLRD-----GQIPLFLDVKRPPGQLGPHGGASGRRGGIGRGLGG 340
BLAST of NO11G01160 vs. NCBI_GenBank
Match: KIY70694.1 (hypothetical protein CYLTODRAFT_441791 [Cylindrobasidium torrendii FP15055 ss-10]) HSP 1 Score: 70.9 bits (172), Expect = 1.800e-8 Identity = 43/109 (39.45%), Postives = 62/109 (56.88%), Query Frame = 0 Query: 47 RKPTPEKVGRKFILAYYPVMSKSAEELIKFYKEDSSFSHTNIAEVTEGQDNKPAYGLDQIRARIDALDLGGAVVDITSVDVQSSKDGAVLILVQGVMTRRGGKPPRAFV 156 R P +VG +F+ YY ++K + L FY + S+F H TEG+D KP +G +I A+I ++ V I SVD QSS +G ++I V G M+ R G+P R FV Sbjct: 13 RVVVPSEVGWQFVPQYYTFVNKQPDRLHCFYTKKSTFIHG-----TEGEDGKPCHGQQEIHAKITSIGFEDCKVFIHSVDAQSSANGGIIIQVIGEMSNR-GEPWRKFV 115
BLAST of NO11G01160 vs. NCBI_GenBank
Match: XP_007301748.1 (hypothetical protein STEHIDRAFT_137985 [Stereum hirsutum FP-91666 SS1] >EIM88786.1 hypothetical protein STEHIDRAFT_137985 [Stereum hirsutum FP-91666 SS1]) HSP 1 Score: 70.9 bits (172), Expect = 1.800e-8 Identity = 43/105 (40.95%), Postives = 60/105 (57.14%), Query Frame = 0 Query: 51 PEKVGRKFILAYYPVMSKSAEELIKFYKEDSSFSHTNIAEVTEGQDNKPAYGLDQIRARIDALDLGGAVVDITSVDVQSSKDGAVLILVQGVMTRRGGKPPRAFV 156 P +VG +F+ YY ++K L FY + S+F H TEG+D KPA+G +I RI ++ V I SVD QSS +G ++I V G M+ R G+P R FV Sbjct: 17 PSEVGWQFVPQYYTFVNKQPNRLHCFYTKSSTFIHG-----TEGEDGKPAFGQQEIHNRITSIGFEDCKVFIHSVDAQSSANGGIIIQVIGEMSNR-GEPWRKFV 115
BLAST of NO11G01160 vs. NCBI_GenBank
Match: CBJ29085.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 70.1 bits (170), Expect = 3.000e-8 Identity = 42/99 (42.42%), Postives = 60/99 (60.61%), Query Frame = 0 Query: 49 PTPEKVGRKFILAYY-PVMSKSAEELIKFYKEDSSFSHTNIAEVTEGQDNKPAYGLDQIRARIDALDLGGAVVDI--TSVDVQSSKDGAVLILVQGVMT 145 P P VG F+ YY V+SK EL +FYK++S+F H + ++ +P GL+ I+A+I L LGGA VD+ SVD Q S+ G VL++V G +T Sbjct: 8 PAPAVVGSHFVKQYYGEVLSKKPVELHRFYKDESTFCH-----ASGTKEEEPVSGLEDIKAKIKHLGLGGATVDLGCGSVDAQPSEGGGVLLMVTGSIT 101
BLAST of NO11G01160 vs. NCBI_GenBank
Match: XP_003027588.1 (hypothetical protein SCHCODRAFT_83395 [Schizophyllum commune H4-8] >EFI92685.1 hypothetical protein SCHCODRAFT_83395 [Schizophyllum commune H4-8]) HSP 1 Score: 70.1 bits (170), Expect = 3.000e-8 Identity = 43/109 (39.45%), Postives = 60/109 (55.05%), Query Frame = 0 Query: 47 RKPTPEKVGRKFILAYYPVMSKSAEELIKFYKEDSSFSHTNIAEVTEGQDNKPAYGLDQIRARIDALDLGGAVVDITSVDVQSSKDGAVLILVQGVMTRRGGKPPRAFV 156 R P VG +F+ YY ++K E L FY + S+F H TEG+D KP +G +I +I ++ V I SVD QSS DG ++I V G M+ + G+P R FV Sbjct: 13 RNVVPSDVGWQFVPQYYTFVNKEPERLHCFYTKRSTFIHG-----TEGEDGKPCHGQQEIHQKITSIGFKDCKVFIHSVDAQSSADGGIIIQVIGEMSNQ-GEPWRKFV 115
BLAST of NO11G01160 vs. NCBI_GenBank
Match: KIP12122.1 (hypothetical protein PHLGIDRAFT_124304 [Phlebiopsis gigantea 11061_1 CR5-6]) HSP 1 Score: 69.7 bits (169), Expect = 3.900e-8 Identity = 40/97 (41.24%), Postives = 56/97 (57.73%), Query Frame = 0 Query: 51 PEKVGRKFILAYYPVMSKSAEELIKFYKEDSSFSHTNIAEVTEGQDNKPAYGLDQIRARIDALDLGGAVVDITSVDVQSSKDGAVLILVQGVMTRRG 148 P +VG +F+ YY ++K L FY + S+F H TEG+D+KP YG +I ARI A+ V I SVD QSS +G ++I V G M+ +G Sbjct: 8 PSEVGWQFVPQYYTFVNKQPGRLHCFYTKTSTFIHG-----TEGEDDKPCYGQQEIHARITAIGFQDCKVFIHSVDAQSSANGGIIIQVIGEMSNKG 99
BLAST of NO11G01160 vs. NCBI_GenBank
Match: KIY47528.1 (hypothetical protein FISHEDRAFT_13956, partial [Fistulina hepatica ATCC 64428]) HSP 1 Score: 69.3 bits (168), Expect = 5.200e-8 Identity = 43/109 (39.45%), Postives = 59/109 (54.13%), Query Frame = 0 Query: 47 RKPTPEKVGRKFILAYYPVMSKSAEELIKFYKEDSSFSHTNIAEVTEGQDNKPAYGLDQIRARIDALDLGGAVVDITSVDVQSSKDGAVLILVQGVMTRRGGKPPRAFV 156 R P +VG +F+ YY ++K E L FY + S+F H TEG+D KP +G +I RI ++ V I SVD QSS DG ++I V G M+ +P R FV Sbjct: 12 RNVVPSEVGWQFVPQYYTFVNKQPERLHCFYTKQSTFIHG-----TEGEDGKPCHGQQEIHRRIQSIGYQDCRVYIHSVDAQSSADGGIIIQVIGEMSNH-DEPWRKFV 114
BLAST of NO11G01160 vs. NCBI_GenBank
Match: PSR70571.1 (hypothetical protein PHLCEN_2v13542 [Phlebia centrifuga]) HSP 1 Score: 68.9 bits (167), Expect = 6.700e-8 Identity = 42/105 (40.00%), Postives = 59/105 (56.19%), Query Frame = 0 Query: 51 PEKVGRKFILAYYPVMSKSAEELIKFYKEDSSFSHTNIAEVTEGQDNKPAYGLDQIRARIDALDLGGAVVDITSVDVQSSKDGAVLILVQGVMTRRGGKPPRAFV 156 P +VG +F+ YY ++K L FY + S+F H TEG+D KP YG +I A+I ++ V I SVD QSS +G ++I V G M+ + G P R FV Sbjct: 9 PSEVGWQFVPQYYTFVNKQPNRLHCFYTKASTFIHG-----TEGEDGKPCYGQQEIHAKITSIGFQDCKVFIHSVDAQSSANGGIIIQVIGEMSNQ-GDPWRKFV 107
BLAST of NO11G01160 vs. NCBI_GenBank
Match: PBK68688.1 (NTF2-like protein [Armillaria solidipes]) HSP 1 Score: 68.6 bits (166), Expect = 8.800e-8 Identity = 42/109 (38.53%), Postives = 59/109 (54.13%), Query Frame = 0 Query: 47 RKPTPEKVGRKFILAYYPVMSKSAEELIKFYKEDSSFSHTNIAEVTEGQDNKPAYGLDQIRARIDALDLGGAVVDITSVDVQSSKDGAVLILVQGVMTRRGGKPPRAFV 156 R P +VG +F+ YY ++K + L FY + S+F H TEG+D KP +G +I A+I ++ V I SVD QSS DG ++I V G M+ P R FV Sbjct: 11 RNVVPSEVGWQFVPQYYTFVNKQPDRLHCFYTKKSTFIHG-----TEGEDGKPCHGQQEIHAKITSIGFQDCKVFIHSVDAQSSADGGIIIQVIGEMSNH-NDPWRKFV 113 The following BLAST results are available for this feature:
BLAST of NO11G01160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G01160 ID=NO11G01160|Name=NO11G01160|organism=Nannochloropsis oceanica|type=gene|length=3262bpback to top protein sequence of NO11G01160.1 >NO11G01160.1-protein ID=NO11G01160.1-protein|Name=NO11G01160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=681bpback to top protein sequence of NO11G01160.2 >NO11G01160.2-protein ID=NO11G01160.2-protein|Name=NO11G01160.2|organism=Nannochloropsis oceanica|type=polypeptide|length=539bpback to top Synonyms
Publications
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