Naga_100016g15, gene5402 (gene) Nannochloropsis gaditana

Overview
NameNaga_100016g15
Unique Namegene5402
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:353815..355920 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100016g15
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:353815..355920 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL021ngnoL021Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL019ngnoL019Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL018ngnoL018Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G01160NO11G01160Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5590rna5590-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5590rna5590Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5590

>rna5590-protein ID=rna5590-protein|Name=rna5590|organism=Nannochloropsis gaditana|type=polypeptide|length=386bp
MASTKSTKSSSETRNTNSGNSSSKCVTNSSYVKKPTPEKVGRRFVLTYYP
VMSKSAEDLIKFYKEDSCFSHVPETEEGQDSKAAVGLEEIRARIEALNLG
GAVVDIRSVDVQPSKDGAVLVLVQGLMRRRSAPAPSAFVQTFFLAQQENN
EAHYYLLNDVFRAWPETPSAHPPSFPSSPGPPTPDPPRSEASPVTASAAA
EKEGAMAIARVQAEAMRGQEGVGVQERKETKEEEEEEAEEGAELGMHEAE
LTALLVGVGGAGTVVRDYRVNKSQYSVFVELGDAESVARVMGVVRADPKR
FHLRDGQIPLFLDVKRPPGQLGPHGGASGRRGGIGRGLGGGERGSLLNNG
SNSRGGGNENSEHSKKGRPLGPDGAGRGRRREKGEK
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Synonyms
Publications