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Properties
| Property Name | Value |
|---|
| Product | ran protein binding protein |
| Orig transcript id | gnl|cribi|Naga_100016g15.2937.mrna |
| Orig protein id | gnl|cribi|Naga_100016g15.2937 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:353815..355920 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5590 ID=rna5590|Name=rna5590|organism=Nannochloropsis gaditana|type=mRNA|length=1326bp
ATGAGGAGGCTCATTGAAATCCCTTGGTTAGACGAGTGTGATCAAGATGG
TACCTCAGCGCGTTGCCAAAATCCCCGACGGCGCTCCATATTGTACAGGT
CGCCTCCATACATCAGCGACGTGGACGTAAAGCGGGAGATAATAACCATC
TCCAACCCTGAGTCCGTCCCGGTCGACTTGTCGGGGCATTCTTTGTGCGA
CAAAGGACAACATCACAGGTATGAATTTGAGGAAGGCTACACTCTTGCCC
CGGGTGCAGAGTTGCACGTGTACTGCGCACCAGGCAAGTACGGCGTGGAG
GAAGAAGAACGGCCGGGGGAACTGCAGATACTGCTGTGGACGACGCGGGA
GGGCAGACCTCGGCGTCGCGAGGTATTGAATCAAGAAGGAGACAGAGTCA
CACTCATCGATCAGAATGGAATGGAGATCGCAGCCCTAGAAGTGACGGTA
AATGGAGATGACGAAGAAGAGGAGGGCGAGCGGGAGAAGCGGGGAACGGG
GAAGGCAGAAAGGCGAGAGGAAATCAAGCGGTTGTATTTGTATCGTCTTG
AAGTGCTTCAGTTGAAGTACGCGAAGAGTGTGGTGACCTGGCTCCAAGGC
TCTCGATTGGCCCTTATGGTGCTGGCCTTCATCTTCGTGCTCCTGAACGA
CCTTCACTCCTACGTCCTCCTGGAGGTCGGGGGCTTCGCGCTGGACATGG
CCGCGCGGTACCTGGACCCCGTGCGTCTGCCCCGCAGCCGCCAGCGTGTC
TTCGCCCTGGTGGCGGACCGGTTGGATTCCGCGAGCCTGCTGGCGGTCCT
GATGACGGGCCTGGTCGAGACGGGGGGCCCCCTGTATGGGCCCAACCCCG
TGCACCGGGTCCGCCTGGGGTTGGGCATGCTCCTGATCGAGGTCCTGGCC
TTCTGGTTCGAGGTGCTGGTGGAGGGTTCAACGCGCCTGGCGGCAGCGGA
TGCGGTGGCGCCGTACTGGAGGCAGGGTCCGGCGCCGGCAGGAGAGGAGG
AGGTGTCGGTCCAGACGGGCCCGTATCGGAAGTGGCTTCGGCAGCATCTG
GGCCGGTGCCCCGCGCTCATCACGTTCGCGACGGGGGGGAACCACCTCTT
CCTGGTCTTGGCCGTCGTCCGCCTGGCCCATGCGCAGGCGGGCGGCTCGG
AGGGCCTGGTGGTTCGGGCGGTCTCGGTAGCGAGTCGCATCATGGCCTAC
CTCCCCTTACCGCGGGCGATCGTCAGCAACTGGCAGTTTCTCCTGATCGC
CGTGTGCCTGTCGGCCATGTATCGATGCATCCTGATATGGGCTGAGCTGC
TTGACCTGCTGGAGAGCAAGTTGTGA back to topprotein sequence of rna5590 >rna5590-protein ID=rna5590-protein|Name=rna5590|organism=Nannochloropsis gaditana|type=polypeptide|length=386bp
MASTKSTKSSSETRNTNSGNSSSKCVTNSSYVKKPTPEKVGRRFVLTYYP
VMSKSAEDLIKFYKEDSCFSHVPETEEGQDSKAAVGLEEIRARIEALNLG
GAVVDIRSVDVQPSKDGAVLVLVQGLMRRRSAPAPSAFVQTFFLAQQENN
EAHYYLLNDVFRAWPETPSAHPPSFPSSPGPPTPDPPRSEASPVTASAAA
EKEGAMAIARVQAEAMRGQEGVGVQERKETKEEEEEEAEEGAELGMHEAE
LTALLVGVGGAGTVVRDYRVNKSQYSVFVELGDAESVARVMGVVRADPKR
FHLRDGQIPLFLDVKRPPGQLGPHGGASGRRGGIGRGLGGGERGSLLNNG
SNSRGGGNENSEHSKKGRPLGPDGAGRGRRREKGEK back to topmRNA from alignment at CM002466.1:353815..355920- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5590 ID=rna5590|Name=rna5590|organism=Nannochloropsis gaditana|type=mRNA|length=2106bp|location=Sequence derived from alignment at CM002466.1:353815..355920- (Nannochloropsis gaditana)
ATGGCTTCGACGAAGAGCACCAAAAGTAGCTCCGAGACCCGAAACACAAA
TAGCGGGAATAGTAGTAGCAAATGCGTGACGAATAGCAGCTATGTAAAAA
AGCCCACACCAGAAAAAGTTGGCCGCAGGTACTGTCACTCCTTGCCCTCT
TCTCTGAGTCCATTTCGCTTGAAAGCGTACTCGTGGTTGGGGCAGCACTT
GCGGCCTTCCATGTCGCCCGATGACTCTGAATGATATTTTCTTTTTTGGC
TGTCGCAGGTTTGTCTTGACATATTACCCTGTAATGTCAAAGTCTGCGGA
GGATCTCATCAAGTTCTACAAAGAGGATTCATGCTTCTCGCACGTCCCTG
AGACCGAAGGTAGGAGGGATTCGGGGGGGCAAGGTCAGGAAGGGGAGGGC
GCTGGGGTCCGGAGACCAGGTTTAGTTCAAACGCGATGCCAGTCTGTTGT
GGATTTTTTTAGTAAGAGTTACTTTCCAGGAACGCACTGCTTTCCCAGCC
GGCAAAGGTACCGTCTACTCAAGCGCCCCGACACGCGTCATCTCCCACAC
CCCCAGAGGGCCAGGACAGTAAAGCTGCCGTTGGGCTTGAGGAGATCCGG
GCGCGTATCGAAGCCTTGAACCTGGGCGGCGCCGTGGTGGACATTCGCAG
CGTGGACGTGCAGCCCTCCAAAGACGGGGCCGTGCTCGTCCTCGTTCAGG
GTCTCATGCGGCGCCGGAGCGCGCCCGCCCCCTCGGCCTTTGTCCAGACC
TTCTTTTTGGCCCAGCAGGAGAACAACGAGGCGCACTACTACCTTCTGAA
CGACGTCTTCCGCGCCTGGCCAGAAACCCCCAGCGCGCACCCTCCCTCCT
TCCCCTCTTCCCCCGGCCCCCCCACGCCCGATCCCCCTCGCTCGGAGGCT
TCTCCGGTGACGGCCTCGGCCGCCGCCGAGAAAGAGGGGGCGATGGCAAT
CGCACGGGTCCAAGCAGAAGCCATGCGGGGCCAGGAGGGCGTTGGTGTGC
AAGAAAGGAAGGAGACGAAGGAGGAAGAGGAGGAGGAGGTGGAAGCTGGT
GCCGTGGCGCAGGCGGGAATGGAGCGGGGCGGAAAGGAGGCTTGGGCTGG
GAGTAAGGAGGAAGGGCGGGGGCGACGGCGGGAGAGGAAAAAGAAAGGGA
TGGAGGGGGAGGTGATGGGGGTGGGGGGCAAAGCGGGCCTTCCGGGCCCT
GGAGAGCCCCCGCCTGTTCCGATGGCCACGCCCACGCCCCCAGCCCGGGC
GGGGGGGGCACGGGGGGAGCCGGTCAAGGGGGGGGGCAAATTCAAGGATA
CGGAGGTGGCGGGGGAGGACAGTACGGCGGCTGGCACCGCCCGGAGCGCG
CCGCCGTCGTGGAGCGCGGTGGTGGGGAGGAGGGGGGAGGGCGAGGAGGA
AGAGAAGGGGGGCGGTAAGGGGGCCGGGGGGGGTCAGGCCGAGCGCGCGA
GCAGCAGTAGCAGCGCTGGTGAGAAAGCCGTGGCGGGGGAACAGGGAGTG
CGCGAGGAGGGTGCCGGGCCGTCGCGGGGGCATTCCTCTTCCCCGTCCAA
GAAGGGCCGGAGGGGGGGGGCAGGGACGCTGGAGGCGGGAGGTGCCCGGG
GGGGGGAGGGAACGGGGGCCGAGGGTGTTTCTCGCTCTTTGTATGTGAAA
TGCAAGGCGGAGGAAGGGGCGGAGCTGGGGATGCACGAGGCAGAGCTGAC
GGCCTTGCTGGTGGGGGTGGGGGGCGCGGGGACGGTCGTGCGAGACTACC
GTGTTAACAAGAGCCAGTACTCGGTCTTTGTGGAGCTGGGGGATGCGGAG
AGCGTCGCGCGGGTTATGGGCGTGGTACGGGCGGATCCGAAGCGTTTTCA
TCTACGGGACGGGCAGATCCCCCTCTTTCTGGACGTGAAACGGCCGCCGG
GGCAGTTGGGCCCTCACGGGGGGGCGTCGGGTCGACGGGGCGGCATTGGG
CGAGGCCTGGGGGGGGGGGAGAGGGGCAGCCTTCTCAACAATGGCAGCAA
CAGTAGAGGTGGGGGCAATGAGAATAGCGAACACAGCAAAAAGGGTCGGC
CGTTGGGGCCGGACGGGGCCGGGCGTGGCCGCCGCCGGGAGAAGGGGGAA
AAGTAG back to topCoding sequence (CDS) from alignment at CM002466.1:353815..355920- >rna5590 ID=rna5590|Name=rna5590|organism=Nannochloropsis gaditana|type=CDS|length=4644bp|location=Sequence derived from alignment at CM002466.1:353815..355920- (Nannochloropsis gaditana)
GCGGAGGAAGGGGCGGAGCTGGGGATGCACGAGGCAGAGCTGACGGCCTT
GCTGGTGGGGGTGGGGGGCGCGGGGACGGTCGTGCGAGACTACCGTGTTA
ACAAGAGCCAGTACTCGGTCTTTGTGGAGCTGGGGGATGCGGAGAGCGTC
GCGCGGGTTATGGGCGTGGTACGGGCGGATCCGAAGCGTTTTCATCTACG
GGACGGGCAGATCCCCCTCTTTCTGGACGTGAAACGGCCGCCGGGGCAGT
TGGGCCCTCACGGGGGGGCGTCGGGTCGACGGGGCGGCATTGGGCGAGGC
CTGGGGGGGGGGGAGAGGGGCAGCCTTCTCAACAATGGCAGCAACAGTAG
AGGTGGGGGCAATGAGAATAGCGAACACAGCAAAAAGGGTCGGCCGTTGG
GGCCGGACGGGGCCGGGCGTGGCCGCCGCCGGGAGAAGGGGGAAAAGTAG
AGGGCCAGGACAGTAAAGCTGCCGTTGGGCTTGAGGAGATCCGGGCGCGT
ATCGAAGCCTTGAACCTGGGCGGCGCCGTGGTGGACATTCGCAGCGTGGA
CGTGCAGCCCTCCAAAGACGGGGCCGTGCTCGTCCTCGTTCAGGGTCTCA
TGCGGCGCCGGAGCGCGCCCGCCCCCTCGGCCTTTGTCCAGACCTTCTTT
TTGGCCCAGCAGGAGAACAACGAGGCGCACTACTACCTTCTGAACGACGT
CTTCCGCGCCTGGCCAGAAACCCCCAGCGCGCACCCTCCCTCCTTCCCCT
CTTCCCCCGGCCCCCCCACGCCCGATCCCCCTCGCTCGGAGGCTTCTCCG
GTGACGGCCTCGGCCGCCGCCGAGAAAGAGGGGGCGATGGCAATCGCACG
GGTCCAAGCAGAAGCCATGCGGGGCCAGGAGGGCGTTGGTGTGCAAGAAA
GGAAGGAGACGAAGGAGGAAGAGGAGGAGGAGGTTTGTCTTGACATATTA
CCCTGTAATGTCAAAGTCTGCGGAGGATCTCATCAAGTTCTACAAAGAGG
ATTCATGCTTCTCGCACGTCCCTGAGACCGAAGATGGCTTCGACGAAGAG
CACCAAAAGTAGCTCCGAGACCCGAAACACAAATAGCGGGAATAGTAGTA
GCAAATGCGTGACGAATAGCAGCTATGTAAAAAAGCCCACACCAGAAAAA
GTTGGCCGCAGGCGGAGGAAGGGGCGGAGCTGGGGATGCACGAGGCAGAG
CTGACGGCCTTGCTGGTGGGGGTGGGGGGCGCGGGGACGGTCGTGCGAGA
CTACCGTGTTAACAAGAGCCAGTACTCGGTCTTTGTGGAGCTGGGGGATG
CGGAGAGCGTCGCGCGGGTTATGGGCGTGGTACGGGCGGATCCGAAGCGT
TTTCATCTACGGGACGGGCAGATCCCCCTCTTTCTGGACGTGAAACGGCC
GCCGGGGCAGTTGGGCCCTCACGGGGGGGCGTCGGGTCGACGGGGCGGCA
TTGGGCGAGGCCTGGGGGGGGGGGAGAGGGGCAGCCTTCTCAACAATGGC
AGCAACAGTAGAGGTGGGGGCAATGAGAATAGCGAACACAGCAAAAAGGG
TCGGCCGTTGGGGCCGGACGGGGCCGGGCGTGGCCGCCGCCGGGAGAAGG
GGGAAAAGTAGAGGGCCAGGACAGTAAAGCTGCCGTTGGGCTTGAGGAGA
TCCGGGCGCGTATCGAAGCCTTGAACCTGGGCGGCGCCGTGGTGGACATT
CGCAGCGTGGACGTGCAGCCCTCCAAAGACGGGGCCGTGCTCGTCCTCGT
TCAGGGTCTCATGCGGCGCCGGAGCGCGCCCGCCCCCTCGGCCTTTGTCC
AGACCTTCTTTTTGGCCCAGCAGGAGAACAACGAGGCGCACTACTACCTT
CTGAACGACGTCTTCCGCGCCTGGCCAGAAACCCCCAGCGCGCACCCTCC
CTCCTTCCCCTCTTCCCCCGGCCCCCCCACGCCCGATCCCCCTCGCTCGG
AGGCTTCTCCGGTGACGGCCTCGGCCGCCGCCGAGAAAGAGGGGGCGATG
GCAATCGCACGGGTCCAAGCAGAAGCCATGCGGGGCCAGGAGGGCGTTGG
TGTGCAAGAAAGGAAGGAGACGAAGGAGGAAGAGGAGGAGGAGGTTTGTC
TTGACATATTACCCTGTAATGTCAAAGTCTGCGGAGGATCTCATCAAGTT
CTACAAAGAGGATTCATGCTTCTCGCACGTCCCTGAGACCGAAGATGGCT
TCGACGAAGAGCACCAAAAGTAGCTCCGAGACCCGAAACACAAATAGCGG
GAATAGTAGTAGCAAATGCGTGACGAATAGCAGCTATGTAAAAAAGCCCA
CACCAGAAAAAGTTGGCCGCAGGCGGAGGAAGGGGCGGAGCTGGGGATGC
ACGAGGCAGAGCTGACGGCCTTGCTGGTGGGGGTGGGGGGCGCGGGGACG
GTCGTGCGAGACTACCGTGTTAACAAGAGCCAGTACTCGGTCTTTGTGGA
GCTGGGGGATGCGGAGAGCGTCGCGCGGGTTATGGGCGTGGTACGGGCGG
ATCCGAAGCGTTTTCATCTACGGGACGGGCAGATCCCCCTCTTTCTGGAC
GTGAAACGGCCGCCGGGGCAGTTGGGCCCTCACGGGGGGGCGTCGGGTCG
ACGGGGCGGCATTGGGCGAGGCCTGGGGGGGGGGGAGAGGGGCAGCCTTC
TCAACAATGGCAGCAACAGTAGAGGTGGGGGCAATGAGAATAGCGAACAC
AGCAAAAAGGGTCGGCCGTTGGGGCCGGACGGGGCCGGGCGTGGCCGCCG
CCGGGAGAAGGGGGAAAAGTAGAGGGCCAGGACAGTAAAGCTGCCGTTGG
GCTTGAGGAGATCCGGGCGCGTATCGAAGCCTTGAACCTGGGCGGCGCCG
TGGTGGACATTCGCAGCGTGGACGTGCAGCCCTCCAAAGACGGGGCCGTG
CTCGTCCTCGTTCAGGGTCTCATGCGGCGCCGGAGCGCGCCCGCCCCCTC
GGCCTTTGTCCAGACCTTCTTTTTGGCCCAGCAGGAGAACAACGAGGCGC
ACTACTACCTTCTGAACGACGTCTTCCGCGCCTGGCCAGAAACCCCCAGC
GCGCACCCTCCCTCCTTCCCCTCTTCCCCCGGCCCCCCCACGCCCGATCC
CCCTCGCTCGGAGGCTTCTCCGGTGACGGCCTCGGCCGCCGCCGAGAAAG
AGGGGGCGATGGCAATCGCACGGGTCCAAGCAGAAGCCATGCGGGGCCAG
GAGGGCGTTGGTGTGCAAGAAAGGAAGGAGACGAAGGAGGAAGAGGAGGA
GGAGGTTTGTCTTGACATATTACCCTGTAATGTCAAAGTCTGCGGAGGAT
CTCATCAAGTTCTACAAAGAGGATTCATGCTTCTCGCACGTCCCTGAGAC
CGAAGATGGCTTCGACGAAGAGCACCAAAAGTAGCTCCGAGACCCGAAAC
ACAAATAGCGGGAATAGTAGTAGCAAATGCGTGACGAATAGCAGCTATGT
AAAAAAGCCCACACCAGAAAAAGTTGGCCGCAGGCGGAGGAAGGGGCGGA
GCTGGGGATGCACGAGGCAGAGCTGACGGCCTTGCTGGTGGGGGTGGGGG
GCGCGGGGACGGTCGTGCGAGACTACCGTGTTAACAAGAGCCAGTACTCG
GTCTTTGTGGAGCTGGGGGATGCGGAGAGCGTCGCGCGGGTTATGGGCGT
GGTACGGGCGGATCCGAAGCGTTTTCATCTACGGGACGGGCAGATCCCCC
TCTTTCTGGACGTGAAACGGCCGCCGGGGCAGTTGGGCCCTCACGGGGGG
GCGTCGGGTCGACGGGGCGGCATTGGGCGAGGCCTGGGGGGGGGGGAGAG
GGGCAGCCTTCTCAACAATGGCAGCAACAGTAGAGGTGGGGGCAATGAGA
ATAGCGAACACAGCAAAAAGGGTCGGCCGTTGGGGCCGGACGGGGCCGGG
CGTGGCCGCCGCCGGGAGAAGGGGGAAAAGTAGAGGGCCAGGACAGTAAA
GCTGCCGTTGGGCTTGAGGAGATCCGGGCGCGTATCGAAGCCTTGAACCT
GGGCGGCGCCGTGGTGGACATTCGCAGCGTGGACGTGCAGCCCTCCAAAG
ACGGGGCCGTGCTCGTCCTCGTTCAGGGTCTCATGCGGCGCCGGAGCGCG
CCCGCCCCCTCGGCCTTTGTCCAGACCTTCTTTTTGGCCCAGCAGGAGAA
CAACGAGGCGCACTACTACCTTCTGAACGACGTCTTCCGCGCCTGGCCAG
AAACCCCCAGCGCGCACCCTCCCTCCTTCCCCTCTTCCCCCGGCCCCCCC
ACGCCCGATCCCCCTCGCTCGGAGGCTTCTCCGGTGACGGCCTCGGCCGC
CGCCGAGAAAGAGGGGGCGATGGCAATCGCACGGGTCCAAGCAGAAGCCA
TGCGGGGCCAGGAGGGCGTTGGTGTGCAAGAAAGGAAGGAGACGAAGGAG
GAAGAGGAGGAGGAGGTTTGTCTTGACATATTACCCTGTAATGTCAAAGT
CTGCGGAGGATCTCATCAAGTTCTACAAAGAGGATTCATGCTTCTCGCAC
GTCCCTGAGACCGAAGATGGCTTCGACGAAGAGCACCAAAAGTAGCTCCG
AGACCCGAAACACAAATAGCGGGAATAGTAGTAGCAAATGCGTGACGAAT
AGCAGCTATGTAAAAAAGCCCACACCAGAAAAAGTTGGCCGCAG back to top
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