NO10G02540, NO10G02540 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO10G02540 vs. NCBI_GenBank
Match: EWM25365.1 (hypothetical protein Naga_100005g1 [Nannochloropsis gaditana]) HSP 1 Score: 533.5 bits (1373), Expect = 2.700e-147 Identity = 263/405 (64.94%), Postives = 325/405 (80.25%), Query Frame = 0
Query: 1518 QPIAEEMADFEIAVADSQAAEAFPASTFVVLDGENDFAEGTPNEFVQAVKESPLGEIGSNNPRPVYAAINGPVACNPCGFKGNMNKEIVGENAGECAMSEEEEADCTLEGVKVQGVDGKAASLPKWVLQAGDLFDASSTDIPMIDTQVTTATLKIGCSSGAAESVPERCVLPSDLESVISKALGDDCARVNVEKMNSLKHPELGAFNQPNNKTFYAGSELTEMYDLSFTTHDKECAALTTDWVKNFKPSALKEALNSVIPADLTLDNSQADFITTHVVKGMSLSTATEGMMSSVVGTRAGNIVPSVLVSSADGQRLALPSIQQGGAGKVVLSGFSTKAPVTLTVTEKCGLPSASDKPIGQIIPKQKGAVTVPFEVPMDLAPDTYSIKATQYGVNFCTQPFDVAAS 1923
QP+A E+ DFEIA A+SQA+ A PAS+F VL+GEN F+ GTPN FVQAVK+SPLG +G+N P+ YAA+NGP+ACNPCGFKGNMNK+IVGENAG C +SEEE + C+LE V+V G DG A +LPKW+ QA +L+D SS D+P+IDTQVTTA LK+GCSS +AESVPE+C PSDL+S ISKALGDDCARVNV+K NS++HPEL F N + F+ SELTE+YDLSFTTHD ECA L +DWVK FK + L ++P D+ +D S ADF+TTH V+GM+L A+ +MSSVVG +GN+VP+VLVS+ G+RLALP+ QG GKV++SGFS+ APV LT+T+KCGL S+ D PIGQI+PK KG++TVPFEVP DLAP TYSIKATQ+ V+FCTQPFDV AS
Sbjct: 46 QPLAAELEDFEIASAESQAS-AIPASSFTVLEGENTFSAGTPNAFVQAVKDSPLGSVGTNTPQTHYAAVNGPIACNPCGFKGNMNKQIVGENAGACELSEEELSACSLEDVRVLGTDGTAQALPKWIKQASNLYDESSADMPLIDTQVTTAILKLGCSS-SAESVPEQCAQPSDLQSAISKALGDDCARVNVQKKNSIRHPELQEFALSNAEAFFKDSELTEVYDLSFTTHDDECAVLASDWVKQFKAADFASVLGEMLPVDVLIDESNADFVTTHKVRGMALPQASSTVMSSVVGALSGNMVPTVLVSTETGERLALPTFSQGETGKVMISGFSSTAPVGLTLTKKCGLGSSDDIPIGQIVPKGKGSLTVPFEVPADLAPQTYSIKATQFAVSFCTQPFDVTAS 448
BLAST of NO10G02540 vs. NCBI_GenBank
Match: EWM25479.1 (hypothetical protein Naga_100207g1 [Nannochloropsis gaditana]) HSP 1 Score: 492.7 bits (1267), Expect = 5.400e-135 Identity = 256/359 (71.31%), Postives = 283/359 (78.83%), Query Frame = 0
Query: 59 MEAEGARPFGAWWQRRNRKKTLLALFVTVATIGLVAALVVAFKPDTSKAVAGKSEVADVIVPETSSSSVAVTPEEPTDXXXXXXXXXXXXXXXXXXNKTPDPIDVSSLPDGPGGSLPGYKALNGVAETSSDLVAGILGEEAGAASEDFFETMLKDTSLVGSNACVPQSGMELREMVEDNTRCTIISLIPGKRYVVSLPDSDDDITVSGRKVIIGNPIALPTIDGEDSVRIFHIVAGGNLDLQFVRTYRGGGELIATIPVLRGGTALVELGGRFSAFGVIFTNAPPEGIPAFLIAPDISRAVRVFGGQIFVMGGIVTITLSHFWVLQPGVLLREIYVIGADMLVVAGVAVLSGVTFTNSQ 418
M EG RP WWQRR KK+LL LF +ATIGL+A +V+AF+P+ K + AD +V E SS V P P D P+ + SLPDGPGGSLPGYK L+GVAE SSDL+ G+ GEEAGAASEDFF TMLKDTSL+ +ACVPQSGMELR+M ED +RC IISL+PGK Y V+LPDSDDDIT+S RKVIIGNPI+LPTIDG DS RIFHIVAGGNLDLQFVRTYRGGGELIATIPVLRGGTALVELGGRFSAFGVIFTNAPP G+PA LIAPD+SRAVRVFGGQ+FV GGIVTITLSHFWVLQPGVL REIYV+GAD+LVVAGVAVLSGVTFTNSQ
Sbjct: 1 MAVEGTRPIEPWWQRRGWKKSLLVLFAALATIGLIAGIVIAFQPE-EKHASQSPAPADGVVEEASSIETVVPPPSPADKAPIVAEPV-----------EPEEVSTESLPDGPGGSLPGYKVLDGVAEKSSDLIGGVFGEEAGAASEDFFSTMLKDTSLISGSACVPQSGMELRQMAEDPSRCAIISLLPGKIYNVALPDSDDDITISTRKVIIGNPISLPTIDGADSKRIFHIVAGGNLDLQFVRTYRGGGELIATIPVLRGGTALVELGGRFSAFGVIFTNAPPVGMPAILIAPDVSRAVRVFGGQVFVTGGIVTITLSHFWVLQPGVLFREIYVVGADLLVVAGVAVLSGVTFTNSQ 347
BLAST of NO10G02540 vs. NCBI_GenBank
Match: EWM26817.1 (Pectin lyase fold/virulence factor [Nannochloropsis gaditana]) HSP 1 Score: 118.6 bits (296), Expect = 2.100e-22 Identity = 73/205 (35.61%), Postives = 111/205 (54.15%), Query Frame = 0
Query: 217 VGSNACVPQSGMELREMVEDNTRCTIISLIPGKRYVVSLPDSDDDITVSGRKVIIGNPIALPTIDGEDSVRIFHIVAGGNLDLQFVRTYRGGGELIA--TIPVLRGGTALVELGGRFSAFGVIFTNAPPEGIPAFLIAPDISRAVRVFGGQIFVMGGIVTITLSHFWVLQPGVLLREIYVIGADMLVVAGVAVLSGVTFTNSQLF 420
+ + C P +G++LR +VE + C +I+L PG RYV+ D++I V VIIG P+ LP ID R F + A G LDL+FV+ +RG + LRGG A + GG G + E + L+A D+ R++GG + + G + + H + +PGVLLRE+Y +G +LVV+G ++G T T + LF
Sbjct: 183 IAVHGCTPDTGVQLRSLVETGS-CPVITLTPGVRYVL-----DEEIHVRRAVVIIGRPLTLPVIDAHLIARAFSVEAKGRLDLRFVKVWRGVPMAVVDEVYLELRGGVAWIREGGEGVFTGCLMLVHDDE-VGDVLLASDLRVTARLYGGFLLLEAGTLRVRDCHMLLQRPGVLLREVYTVGGYILVVSGNLFMTGSTMTANFLF 380
BLAST of NO10G02540 vs. NCBI_GenBank
Match: EWM22289.1 (Pectin lyase fold/virulence factor [Nannochloropsis gaditana]) HSP 1 Score: 98.2 bits (243), Expect = 2.900e-16 Identity = 64/207 (30.92%), Postives = 102/207 (49.28%), Query Frame = 0
Query: 217 VGSNACVPQSGMELREMVEDNTRCTIISLIPGKRYVVSLPDSDDDITVSGRKVIIGNPIALPTIDGEDSVRIFHIVAGGNLDLQFVRTYRGGGELIATIPV----LRGGTALVELGGRFSAFGVIFTNAPPEGIPAFLIAPDISRAVRVFGGQIFVMGGIVTITLSHFWVLQPGVLLREIYVIGADMLVVAGVAVLSGVTFTNSQLF 420
V C P++ ELR M+ D+T C ++L+P Y ++ + + + R ++G P+ LP ID ++ R F + AGG LD++FV + G+ + +P+ LRG T + GG G F +A FL V+VFGG I G + +T H + + G+ REI +G + LV+ G L+G F N +F
Sbjct: 4 VAVEGCTPKNAEELRYMI-DHTTCPRLTLVPATNYSIT-----EQLVIRRRVTLVGRPLGLPIIDAHNTTRAFLVEAGGFLDVRFVEIVK--GKFVEVVPLVLYRLRGPTCYIRRGGVALFTGCRF-SANWRNAALFLGITPPQTNVQVFGGGIVAESGTLRVTDCHVFRPRIGIAFREIQFVGGEFLVLGGNMYLTGCIFVNMAIF 201
BLAST of NO10G02540 vs. NCBI_GenBank
Match: EWM23493.1 (hypothetical protein Naga_100198g12 [Nannochloropsis gaditana]) HSP 1 Score: 97.8 bits (242), Expect = 3.800e-16 Identity = 68/200 (34.00%), Postives = 104/200 (52.00%), Query Frame = 0
Query: 220 NACVPQSGMELREMVEDNTRCTIISLIPGKRYVVSLPDSDDDITVSGRKVIIGNPIALPTIDGEDSVRIFHIVAGGNLDLQFVRTYRGGG--------ELIAT------IPVLRGGTALVE---LGGRFSAFGVIFTNAPP-EGIPAFLIAPDISRAV-RVFGGQIFVMGGIVTITLSHFWVLQPGVLLREIYVIGADML 401
+ C G+EL + +E N C+I+ L PG+ Y + + +I V +++GNP LP IDGED++R FH++ GG LDL+FV+ + G E+ AT + +RGG+ ++ LGG+F+ GVIF + P E I I V R++GG +F++GG V FW L + IG D+L
Sbjct: 153 DGCEVNDGLELTDAIE-NQSCSIVYLKPGQLY-----ELEREILVRREVIVMGNPSVLPMIDGEDAIRSFHVLEGGFLDLRFVQQFASDGIVREPKPYEIFATTSPRNRVWEIRGGSVFIDEGALGGKFT--GVIFIDDPDVEDAARRSIRRSIDGDVYRIYGGHVFIVGGRVDFVGCLFWDLTLIYTFGNVLYIGQDVL 344
BLAST of NO10G02540 vs. NCBI_GenBank
Match: EWM25323.1 (hypothetical protein Naga_100281g10 [Nannochloropsis gaditana]) HSP 1 Score: 93.2 bits (230), Expect = 9.500e-15 Identity = 70/209 (33.49%), Postives = 104/209 (49.76%), Query Frame = 0
Query: 167 PDGP-GGSLPGYKALNGVAETSSDLVAGILGEEAGAASEDFFETMLKDTSLVGSNACVPQSGMELREMVEDNTRCTIISLIPGKRYVVSLPDSDDDITVSGRKVIIGNPIALPTIDGEDSV-RIFHIVAGGNLDLQFVRTYRGGGELI-ATIPVLRGGTALVELGGRFSAFGVIFTNAPPEGIPAFLIAPDISRA-VRVFGGQIFVMGG 372
P GP G+LPG A+NG T + A AA +L G C PQ+G EL+ M E + C++I L G +LP + + V+ RK+++G+PI LP I + V R+F + GG+LD++FV +R + + V+ G ALVELGG IF P + AF+ + + A R+ GG + V+GG
Sbjct: 127 PLGPLFGALPGAAAINGAFNTLA----------ASAA------------NLAGLQVCYPQNGEELKGMTESGSSCSVIILKKGSSDKYTLPST---VIVTSRKIVLGHPIDLPQIHPDKEVYRLFEVKPGGSLDIRFVSLFRPSPRKVDENLSVIVAGVALVELGGYMRGTACIF-RQPAQTFEAFVKSLETPFARKRIVGGFVLVLGG 309
BLAST of NO10G02540 vs. NCBI_GenBank
Match: XP_005854415.1 (hypothetical protein NGA_0231400, partial [Nannochloropsis gaditana CCMP526] >EKU21941.1 hypothetical protein NGA_0231400, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 92.0 bits (227), Expect = 2.100e-14 Identity = 69/209 (33.01%), Postives = 104/209 (49.76%), Query Frame = 0
Query: 167 PDGP-GGSLPGYKALNGVAETSSDLVAGILGEEAGAASEDFFETMLKDTSLVGSNACVPQSGMELREMVEDNTRCTIISLIPGKRYVVSLPDSDDDITVSGRKVIIGNPIALPTIDGEDSV-RIFHIVAGGNLDLQFVRTYRGGGELI-ATIPVLRGGTALVELGGRFSAFGVIFTNAPPEGIPAFLIAPDISRA-VRVFGGQIFVMGG 372
P GP G+LPG A+NG T + A AA +L G C PQ+G EL+ M E + C++I L G +LP + + V+ RK+++G+PI LP I ++ V R+F + GG+LD++FV +R + + V+ G ALVELGG IF P + F+ + + A R+ GG + V+GG
Sbjct: 127 PLGPLFGALPGAAAINGAFNTLA----------ASAA------------NLAGLQVCYPQNGEELKGMTESGSSCSVIILKKGSSDKYTLPST---VIVTSRKIVLGHPIDLPQIHPDNGVYRLFEVKPGGSLDIRFVSLFRPSPRKVDDNLSVIVAGVALVELGGYMRGTACIF-RQPAQTFEGFVKSLETPFARKRIVGGFVLVLGG 309
BLAST of NO10G02540 vs. NCBI_GenBank
Match: XP_005853421.1 (hypothetical protein NGA_0438900, partial [Nannochloropsis gaditana CCMP526] >EKU22940.1 hypothetical protein NGA_0438900, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 87.8 bits (216), Expect = 4.000e-13 Identity = 75/244 (30.74%), Postives = 110/244 (45.08%), Query Frame = 0
Query: 172 GSLPGYKALNGVAETSSDLVAGILGEEAGAASEDFFETMLKDTSLVGSNACVPQSGMELREMVEDNTRCTIISLIPGKRYVVSLPDSDDDITVSGRKVIIGNPIALPTIDGEDSV-RIFHIVAGGNLDLQFVRTYRGGGELI-ATIPVLRGGTALVELGGRFSAFGVIFTNAPP--EGIPAFLIAPDISRAVRVFGGQIFVMGGIVTITLSHFWVLQP-GVLLREIYVIGADMLVVAGVAVLSG 411
G+LPG A+NG T + A AA SL G C P++G EL+ MVE + C+++ L G Y+ LP + + V+ +I+G+PI P I E V R+F + AG ++D++FV +R + ++ G LV GG F GVIF EG L+ P + R+ GG + V GG P G + +G D LV+AG +V G
Sbjct: 135 GALPGAAAVNGAFNTLA----------ASAA------------SLAGLQVCYPETGPELKAMVESGSSCSVVILKKGSSYIYLLPST---VMVTSSVIILGHPIDPPQIHPEKGVYRLFDVAAGSHIDIRFVSLFRPALRNVGGNRSLIVAGCVLVRTGGYFRGSGVIFRQQAQTFEGFVKGLMDPLAPK--RIVGGFVLVAGGAFFCYGCQIIRWAPYGAPNINLVEVGRDYLVLAGTSVCIG 351
BLAST of NO10G02540 vs. NCBI_GenBank
Match: EWM25326.1 (hypothetical protein Naga_100880g2, partial [Nannochloropsis gaditana]) HSP 1 Score: 87.8 bits (216), Expect = 4.000e-13 Identity = 75/244 (30.74%), Postives = 110/244 (45.08%), Query Frame = 0
Query: 172 GSLPGYKALNGVAETSSDLVAGILGEEAGAASEDFFETMLKDTSLVGSNACVPQSGMELREMVEDNTRCTIISLIPGKRYVVSLPDSDDDITVSGRKVIIGNPIALPTIDGEDSV-RIFHIVAGGNLDLQFVRTYRGGGELI-ATIPVLRGGTALVELGGRFSAFGVIFTNAPP--EGIPAFLIAPDISRAVRVFGGQIFVMGGIVTITLSHFWVLQP-GVLLREIYVIGADMLVVAGVAVLSG 411
G+LPG A+NG T + A AA SL G C P++G EL+ MVE + C+++ L G Y+ LP + + V+ +I+G+PI P I E V R+F + AG ++D++FV +R + ++ G LV GG F GVIF EG L+ P + R+ GG + V GG P G + +G D LV+AG +V G
Sbjct: 135 GALPGAAAVNGAFNTLA----------ASAA------------SLAGLQVCYPETGPELKAMVESGSSCSVVILKKGSSYIYLLPST---VMVTSSVIILGHPIDPPQIHPEKGVYRLFDVAAGSHIDIRFVSLFRPALRNVGGNRSLIVAGCVLVRTGGYFRGSGVIFRQQAQTFEGFVKGLMDPLAPK--RIVGGFVLVAGGAFFCYGCQIIRWAPYGAPNINLVEVGRDYLVLAGTSVCIG 351
BLAST of NO10G02540 vs. NCBI_GenBank
Match: XP_005853964.1 (hypothetical protein NGA_0462000 [Nannochloropsis gaditana CCMP526] >EKU22398.1 hypothetical protein NGA_0462000 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 86.3 bits (212), Expect = 1.200e-12 Identity = 75/238 (31.51%), Postives = 107/238 (44.96%), Query Frame = 0
Query: 170 PGGSLPGYKALNGVAETSSD---LVAGILGEEAGAASEDFFETMLKDTSLVGSNACVPQSGMELREMVEDNTRCTIISLIPGKRYVVSLPDSDDDITVSGRKVIIGNPIALPTIDGEDSVRIFHIVAGGNLDLQFVRTYRGGGEL-----------IATIPVLRGGTALVELGGRFSAFGVIFTNAPPEGIPAFLIAPD---ISRAV---------RVFGGQIFVMGGIVTITLSHFW 382
P S P A G T+++ L I G+ A + + LKD VG N+C P G EL + VE N C ++ L G +L D+DI V+ ++GNP LP ID ED+ R F + GG L+LQFVR +GGG + + + +RGG VE G A G F G+ +A D + A+ R++GG ++V G V +FW
Sbjct: 62 PKASEPEESASTGQTFTNANANALTGAIKGDPLQAIATMGADVNLKD--FVGQNSCWPADGAELLDAVE-NQGCELVVLSSGDPDAYAL---DEDIKVNRYVRVMGNPAVLPQIDAEDAERAFTVGPGGLLELQFVRVRQGGGTVRDRYGLEGSGSSSVVGEVRGGCVSVEPG----ALGANFV-----GVTFIAVANDWDSVQGAIEDQIDFVGGRIYGGHVYVAAGTVNFFGCNFW 284 The following BLAST results are available for this feature:
BLAST of NO10G02540 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 18
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G02540 ID=NO10G02540|Name=NO10G02540|organism=Nannochloropsis oceanica|type=gene|length=9126bpback to top protein sequence of NO10G02540.1 >NO10G02540.1-protein ID=NO10G02540.1-protein|Name=NO10G02540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1930bpback to top Synonyms
Publications
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