Naga_100207g1, gene5034 (gene) Nannochloropsis gaditana

Overview
NameNaga_100207g1
Unique Namegene5034
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:441068..444307 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100207g1
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:441068..444307 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL015ngnoL015Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G02540NO10G02540Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5214rna5214-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5214rna5214Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5214

>rna5214-protein ID=rna5214-protein|Name=rna5214|organism=Nannochloropsis gaditana|type=polypeptide|length=958bp
MAVEGTRPIEPWWQRRGWKKSLLVLFAALATIGLIAGIVIAFQPEEKHAS
QSPAPADGVVEEASSIETVVPPPSPADKAPIVAEPVEPEEVSTESLPDGP
GGSLPGYKVLDGVAEKSSDLIGGVFGEEAGAASEDFFSTMLKDTSLISGS
ACVPQSGMELRQMAEDPSRCAIISLLPGKIYNVALPDSDDDITISTRKVI
IGNPISLPTIDGADSKRIFHIVAGGNLDLQFVRTYRGGGELIATIPVLRG
GTALVELGGRFSAFGVIFTNAPPVGMPAILIAPDVSRAVRVFGGQVFVTG
GIVTITLSHFWVLQPGVLFREIYVVGADLLVVAGVAVLSGVTFTNSQLFI
NGFGVGFLVAVLGGVLVSSGCTFTINFLAINASGAGILVFLGGGVGIFSG
CAWVANLAVFSHFGTGLELFVGGGVIVISGGAFSASLGVAIECGTGVMVS
LGGGTLTMTGVTQQLSAGVDFYAGAGVLNWVGAGSAVIVGFSQSRNVGVA
GVYGIGGTMAVGAGVLVVVGAANVDNYGVASVVLIGGNYFLGAGILIDIG
SPMAKNVGVLFAFFLGFDAFVGAGAIVVRGSPSAVNTGVAYIAPPVSQYF
VNGQAVPASFKNFKLVGKGNATAIVPRDKADKELFKSFDFGFGAFLGDDD
EENDGFVKKMMNRMKKKLGRDDDEEEWGWDDDWEWYDDDWETNYGGGGYS
PGKAGDDDWEEWWGDDDREALEGGGGWGADDDDKEANSDIGFDDDDEETD
WASGATDDDLWDDDLGAGGNDDSEVAPTDDDVLDQGAGLGGWDDDEETGD
LRDDDVETPLVNGPKQDLGVVGETDDDLEEFGVEHDDDLFDNQDLGLDDE
ETQEEDDLYEQDARDDDLETFGVERDDDLFDNQDLGFDGAFDDDVEDDDV
EVEHGAADDDVEDDDVEVEHGAADDDVEDDDVEVEHGAADDDVEDDDVEV
EHARCGGR
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Synonyms
Publications