NO09G03750, NO09G03750 (gene) Nannochloropsis oceanica

Overview
NameNO09G03750
Unique NameNO09G03750
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length955
Alignment locationchr9:1080070..1081024 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:1080070..1081024 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO09G03750 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR056ncniR056Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G03750.1NO09G03750.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|674220gene_9706Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G03750.1NO09G03750.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G03750 ID=NO09G03750|Name=NO09G03750|organism=Nannochloropsis oceanica|type=gene|length=955bp
AGTACCGCTGCCCACAGTGCGGACCACAAAACGCGCGCAAGGGCCTTACC
CTCCAAGCCCTTCCCTCTCTCCTCTTCCTCCAGCTTAAGCGCTTCGACTT
CGACTACCAGACGATGGATCGACACAAGgtcaggagggaaggagggaggg
agggagggagggagggagggagggagggagggaaggttgctccttgtgag
gtcgcgctcgcctaaattgctgcgatacctcggctgttgttgtgttctga
acctccctccctccctcccttcctccctccctccctccttccctccctgc
ctcattgcaacagCTCAACGATGAAGTTCGTTTTCCCCTGGTGCTGGATC
TGAATCCTTTTATGCCTCCCCCTCCCACTGTCCCCGCCCCCTCCTCCTCC
TCCTCCTCCTCCTCCTCCTCCTCCTCCCCCTCTTCCGCCTCCTCCGCCTC
CGCCTCCTTCTCCTCCTCCTCCGCCTCCTCCTCCTCCTCCGCCGCCGCCG
CCGCCGCCGCCGAGGCCTCATTCATCACCCTTCCCTCTCCTTCCTCCTCC
TCCCTCCCGCCTGCATCAGACGCTGCTGCTCCCGATGCTCGCACTCTCCC
TCCCTCCCCCTCTCTATCTCCTCCTTCCTCCTCTTCTCCTTCTTCAACAT
CGAAGAGGGGAAGAGCAGGGAAGGGAGGGCAGGAGGACGAGATGAAGGAG
GAGGAGGAGGAGGAGGAGGTGGAGGGAGGATGGCTCAAAATTCTTCCGGA
GTTGGTGGATAAGAGGGGCTCCCAGCGACCGAAGGAAGAGGGAGAGGGGA
AGGAAGGGAGGGAGGGAGGGGCGGAGGGGATGGCGGCACTGGAGCCCTCT
ACGAAGGCCGAGAGGATTAACGGCAAGGAAGGAGGAAAGATGGAGGGCAA
GGGGAGGGAAGAAAGGAGGAAGGGGGAGGATATGATGACTTCTACCTTCG
TCTGA
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protein sequence of NO09G03750.1

>NO09G03750.1-protein ID=NO09G03750.1-protein|Name=NO09G03750.1|organism=Nannochloropsis oceanica|type=polypeptide|length=219bp
MDRHKLNDEVRFPLVLDLNPFMPPPPTVPAPSSSSSSSSSSSSPSSASSA
SASFSSSSASSSSSAAAAAAAEASFITLPSPSSSSLPPASDAAAPDARTL
PPSPSLSPPSSSSPSSTSKRGRAGKGGQEDEMKEEEEEEEVEGGWLKILP
ELVDKRGSQRPKEEGEGKEGREGGAEGMAALEPSTKAERINGKEGGKMEG
KGREERRKGEDMMTSTFV*
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Synonyms
Publications