jgi.p|Nanoce1779_2|674220, gene_9706 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|674220
Unique Namegene_9706
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_38:177442..184445 -

Link to JBrowse

Properties
Property NameValue
TranscriptId674306
ProteinId674220
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_38supercontigscaffold_38:177442..184445 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL056ncniL056Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G03750NO09G03750Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|674220mRNA_9706-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|674220mRNA_9706Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|674220

>mRNA_9706-protein ID=mRNA_9706-protein|Name=jgi.p|Nanoce1779_2|674220|organism=Nannochloropsis oceanica|type=polypeptide|length=1470bp
MEEDDGPPGDSLRGPSDYAAPSLSPVAAGTPQLTAPGASQEHSSSSPATI
TDPGSVLRKRGSPTQPQTRGSADTTLLNPEAASPNHAQPPSRRLPGLSTS
SPPVTGPLSLTTANPIQTCVTSAPGKYLPHPPTSAAAAAPTTAQVETTSL
SPCYSPSSSSSAPPSSLTTGRGTPSKNITTYGGLKGKKITTGLPLAILGG
RVDKQEGCPLPTAVCKEEEGKQDDEEGREVESKRKGSHDAYMDTDPNSLT
ATATTAPAPAPAAPAASARHVKTSPFAGLANQGATCYMNSLLQTLYMSPP
FRRALYAWRYTGSKEEEGECIPLQLQRLFARLQVAGEAIGDAQHEKEAPG
QNQQQQQEQEREEREGKDERGLEASPAKGGRKGGRKGGGGREHGGLDQEL
RVELCRVLLEALERVLKGTPLETLVKDLFQGTMTDSIECLHCGYQSAKED
SFQDISLPLRPFGASETATIHSVREALEEYCKKETLDGNNQLKRFDFDYQ
TMDRHKLNDEVRFPLVLDLNPFMPPPPTVPAPSSSSSSSSSSSSPSSASS
ASASFSSSSASSSSSAAAAAAAEASFITLPSPSSSSLPPASDAAAPDART
LPPSPSLSPPSSSSPSSTSKRGRAGKGGQEDEMKEEEEEEELVDKRGSQR
PKEEGEGKEGREGGAEGMAALEPSTKAERINGKEGGKMEGKGREERRKGG
GYDDFYLRLNPRTDAERAALVAQAAGPHLYELYSVMVHGGGVHTGHYSAY
IKDTIHAGGRWFLFDDALVLPVRPATVLRAWGGEGGGAEGAGSRGSDPLF
SSFPSSSSSSSSWRNSSHTLYKSGKGREEEKTFLFQQQQQELEEEDEWWR
EGGLEGGVKPTSSFFPNAVAYMLTLSPADVELSIPLPPHLLSWLKEEEAE
EARKEEARRLRSQLASVRVFCGTMEPKERRKEGVEVSLPKTATVAELKEL
AWRFTVYMKRSNPPSTPPKSEYNHLARLSHASTHPDGYYYSSFPSPSPSY
PLPPSLLSDPIYPVPIAFRILERPPSSSSSSISLSSSSSSPSSPCFGPLA
VAFFPSNWAVGTFRSYVAQKWLGDQARRVLVFFLYEKEWRKRKRRRGLKG
GGKEGKEKEVMMLPQEGKGEKEQEEDEEDEDEDEEDVEEEIELYPRLHYI
LWDYDYLKLPQMLGMVIEARPPVLYIELNNELTREEEECWYLHNKSKGGG
EDALRVERWAEKVARQGGKEGDDMRMQEAATSVARRRPLEQGLMIRTKQE
RAEAAAAAAAAAAAAAATATTTAAAAAAAEEKGSVMIPAADQEVSQDGDR
EREAVGGEERQAIAGRSIQVTGDNERRRPTVLMDQEKEEKGDEGKEGLDD
DMHGLAWNQRVDYTVHGGASAGRSDDWLLGFPQSKAGEEQEEHDVDDDDD
SMAGASGGGRETDISAGEECLENGEGEDGMDEEGGEVEEVYSQNDAEADW
RRRHNKREGEEEKEDGMQI*
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Synonyms
Publications