NO08G04310, NO08G04310 (gene) Nannochloropsis oceanica

Overview
NameNO08G04310
Unique NameNO08G04310
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4995
Alignment locationchr8:1258739..1263733 +

Link to JBrowse

Properties
Property NameValue
DescriptionProtein phosphatase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:1258739..1263733 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006470protein dephosphorylation
GO:0006470protein dephosphorylation
Vocabulary: Molecular Function
TermDefinition
GO:0004722protein serine/threonine phosphatase activity
GO:0003824catalytic activity
GO:0004722protein serine/threonine phosphatase activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR036457PPM-type_dom_sf
IPR015655PP2C
IPR001932PPM-type_phosphatase_dom
Homology
[Close]
BLAST of NO08G04310 vs. NCBI_GenBank
Match: EWM26894.1 (protein phosphatase [Nannochloropsis gaditana])

HSP 1 Score: 379.0 bits (972), Expect = 5.300e-101
Identity = 289/683 (42.31%), Postives = 326/683 (47.73%), Query Frame = 0 
Query:  531 PGALSEPNASLHPSPPPSLPCLVLNHSTAFVESNDPGEDRYTNHPP----------------GLP-----------PAIPLLDPTATVKKEGGGKSDRPFSSSSTKDTGLSSQPSPSSRLTRQARGKXXXXXXXXXXXXXXXDVGIYIILDGHGGGRASEYMSQHLVPAVLARLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEIKVKTALREAFLAVDNDFLSSLAEGVTLEQAKGFWNAGTCVVLALIMGNVLYVAHVGDCRAVLAQRASPLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCSSPKVGLCGRGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPLPP----LGRSSPRRTCALDRLLXXXXXIKALALTDDHTCQNASEVKLVKQRTTDKHPIRKSAKDTRNAQTVSGPGGIDRVAGSLAVTRALGNGYLKWPSLSFPPYQPYLPYITGEPVISSHVLSPSADLFLVLASDGLWERLSNDDAVNIVHRWSHRQALQGPSPSFPHLIPTTSDP-SSLPPSTPAAALVEALMVRVAAVHHMGLRTLKCLPKGGQRRQIHDDVCVTVVQFDWRGGE 1182
            P       A   PS PPSLP L L+HSTA VESNDPGEDR+                     G P           P                                               RG+               DVG+Y++LDGHGG RAS+YMS+HL+PAVL RL                                 E KVKTAL +AFLAVD  FL+SL+  +T EQAKG+WNAG+C VLAL++G +LYVAHVGDCRAVL QR  P                                                    XXXXXXXXXXXX      S  K G  GR +                                                               XXXXXXXX             P PP      RSSPRRTCAL RL      + AL LT DH CQNASEVKLVKQRTTDKH IRKSAKD R+A   SG GGIDRVAGSLAVTRALGNGYLKWPSLSFPPY  +LPYITGEPV++++ LSP+ DLFL+LASDGLWE LS+ DAV  V  W HR+ LQG      H  P++S   +S  P TPAAAL E +MVRVA  H+M L TLK LP+GGQRRQIHDD+CVTVVQF W   E
Sbjct:  442 PATTQSLAAPTPPSCPPSLPALFLSHSTAVVESNDPGEDRHXXXXXXXXXXXXXXXXXXXXGGAPILFGEVAACAFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFRGE-RDAARAGEGKGLRTDVGVYLVLDGHGGSRASQYMSEHLIPAVLERL---------------GPCLSSSASSSLTPSAEEEEKVKTALNDAFLAVDRAFLTSLSANLTPEQAKGYWNAGSCAVLALVVGRMLYVAHVGDCRAVLGQRVLP---------------------------------------------PTPSPSSXXXXXXXXXXXXLTSRAVSGAKPGEEGRAD--------------------------------------------KGDDENIARAPLPSASSPRXXXXXXXXTSPVPPSTLPLSAPWPPQPXXXSRSSPRRTCALHRLYPPPSPVTALVLTRDHNCQNASEVKLVKQRTTDKHAIRKSAKDARSAHYASGVGGIDRVAGSLAVTRALGNGYLKWPSLSFPPYLQHLPYITGEPVVTAYELSPTRDLFLLLASDGLWEFLSSKDAVQTVQAWWHRETLQGQL----HRPPSSSTAYTSQHPCTPAAALAEEMMVRVARSHYMDLNTLKRLPRGGQRRQIHDDLCVTVVQFQWEKNE 1015
[Close]
BLAST of NO08G04310 vs. NCBI_GenBank
Match: CBN74456.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 140.2 bits (352), Expect = 4.100e-29
Identity = 93/224 (41.52%), Postives = 120/224 (53.57%), Query Frame = 0 
Query:  972 IKALALTDDHTCQNASEVKLVKQRTTDKHPIRKSAKDTRNAQTVSGPGGIDRVAGSLAVTRALGNGYLKWPSLSFPPYQPYLPYITGEPVISSHVLSPSADLFLVLASDGLWERLSNDDAVNIVHRWSHRQALQGPSPSF--------------------PHLIPTTSDPSSLPPSTPAAALVEALMVRVAAVHHMGLRTLKCLPKGGQRRQIHDDVCVTVVQF 1176
            +KA+AL+ DH C +A EV LV+ R+ D + IR S  D        G   I RVAGSLAVTRA+G+ YLK    SF PY+  +PYIT EP ++   L+ S D FLVLASDG+WE++SN++AV  V       AL   S S                        +P TSD           ALV+ ++ R A  H M +  L+ LP+G  RR +HDDVC TVV F
Sbjct: 1065 LKAIALSRDHNCDDADEVALVRARSGDDNAIRASRND-----EWKGARAIKRVAGSLAVTRAIGDAYLKRAVFSFSPYKEGVPYITAEPEVTVVELT-SKDRFLVLASDGVWEQVSNEEAVQCV-----SGALASASGSMGXXXXXXXXXXXXXXXXXXXXXXVPFTSD-----------ALVDFVLARSAQSHGMSVPALRALPRGSSRRMLHDDVCATVVHF 1266
[Close]
BLAST of NO08G04310 vs. NCBI_GenBank
Match: AIG56378.1 (secreted protein [Achlya hypogyna])

HSP 1 Score: 132.5 bits (332), Expect = 8.600e-27
Identity = 84/205 (40.98%), Postives = 116/205 (56.59%), Query Frame = 0 
Query:  972 IKALALTDDHTCQNASEVKLVKQRTTDKHPIRKSAKDTRNAQTVSGPGGIDRVAGSLAVTRALGNGYLKWPSLSFPPYQPYLPYITGEPVISSHVLSPSADLFLVLASDGLWERLSNDDAVNIVHRW---SHRQALQGPSPSFPHLIPTTSDPSSLPPSTPAAALVEALMVRVAAVHHMGLRTLKCLPKGGQRRQIHDDVCVTVV 1174
            + A  LT  H C NA+EVK V +R+ D++ +R S  D    +   G  GI RVAGSL+VTRALG+ YLK    S PPY+  +PYIT EP +  H +S   D F++LASDGLWE +    AV IV  +   + R +   P      ++ T ++    P ++ +AALV   + R A+   M L  L  + KG QRR IHDD+  TV+
Sbjct:  317 LAAKVLTTSHDCHNAAEVKKVIERSNDRNAVRMSKDD----RLCIGEYGIKRVAGSLSVTRALGDMYLKSAEFSNPPYKAKVPYITAEPDVVVHTVS-KLDKFVILASDGLWEVVPPLLAVQIVSNYGIVAVRDSADSP------IVTTAANAGDAPIASASAALVHCALDRAASKEGMALHDLLAIAKGPQRRSIHDDITCTVI 510
[Close]
BLAST of NO08G04310 vs. NCBI_GenBank
Match: OQR83857.1 (protein phosphatase 2C [Achlya hypogyna])

HSP 1 Score: 129.0 bits (323), Expect = 9.600e-26
Identity = 82/202 (40.59%), Postives = 111/202 (54.95%), Query Frame = 0 
Query:  972 IKALALTDDHTCQNASEVKLVKQRTTDKHPIRKSAKDTRNAQTVSGPGGIDRVAGSLAVTRALGNGYLKWPSLSFPPYQPYLPYITGEPVISSHVLSPSADLFLVLASDGLWERLSNDDAVNIVHRWSHRQALQGPSPSFPHLIPTTSDPSSLPPSTPAAALVEALMVRVAAVHHMGLRTLKCLPKGGQRRQIHDDVCVTVV 1174
            + A  LT  H C NA+EVK V +R+ D++ +R S  D    +   G  GI RVAGSL+VTRALG+ YLK    S PPY+  +PYIT EP +  H +S   D F++LASDGLWE +    AV IV  +                + T ++    P ++ +AALV   + R A+   M L  L  + KG QRR IHDD+  TV+
Sbjct:  317 LAAKVLTTSHDCHNAAEVKKVIERSNDRNAVRMSKDD----RLCIGEYGIKRVAGSLSVTRALGDMYLKSAEFSNPPYKAKVPYITAEPDVVVHTVS-KLDKFVILASDGLWEVVPPLLAVQIVSNY----------------VTTAANAGDAPIASASAALVHCALDRAASKEGMALHDLLAIAKGPQRRSIHDDITCTVI 497
[Close]
BLAST of NO08G04310 vs. NCBI_GenBank
Match: XP_009535128.1 (hypothetical protein PHYSODRAFT_522951, partial [Phytophthora sojae] >EGZ10267.1 hypothetical protein PHYSODRAFT_522951, partial [Phytophthora sojae])

HSP 1 Score: 127.5 bits (319), Expect = 2.800e-25
Identity = 77/209 (36.84%), Postives = 121/209 (57.89%), Query Frame = 0 
Query:  972 IKALALTDDHTCQNASEVKLVKQRTTDKHPIRKSAKDTRNAQTVSGPGGIDRVAGSLAVTRALGNGYLKWPSLSFPPYQPYLPYITGEPVISSHVLSPSADLFLVLASDGLWERLSNDDAVNIVHRWSHRQALQGPSPSFPHLIPTTSDPSSLPPSTPAAALVEALMVRVAAVHHMGLRTLKCLPKGGQRRQIHDDVCVTVVQFDWRGG 1181
            ++A+ ++ DH+C N  E KLV +R+ D++ IR S  D     T +G  G+ RVAGSLA+TRA G+ YLK P LS  P++  +PYIT EP I++ V    ++ +++LASDGLW+ ++  +AV+IV ++   QAL                      ST +AAL+ A + ++A    + +  L  +P+G  RR+ HDD+  TVV  + + G
Sbjct:  130 LQAVEVSVDHSCNNPHEAKLVVERSHDRNAIRMSKDD---QATGAGIVGVKRVAGSLAMTRAFGDFYLKCPELSSAPFKSKVPYITSEPSITT-VYMDGSEKYVILASDGLWDVMTPQEAVHIVDKFDSDQALFF--------------------STASAALIHAALEKIAHRDGLMMHELMAMPQGPVRRRFHDDITCTVVYINHQNG 314
[Close]
BLAST of NO08G04310 vs. NCBI_GenBank
Match: XP_008604264.1 (hypothetical protein SDRG_00560 [Saprolegnia diclina VS20] >EQC42841.1 hypothetical protein SDRG_00560 [Saprolegnia diclina VS20])

HSP 1 Score: 127.1 bits (318), Expect = 3.600e-25
Identity = 84/200 (42.00%), Postives = 107/200 (53.50%), Query Frame = 0 
Query:  974 ALALTDDHTCQNASEVKLVKQRTTDKHPIRKSAKDTRNAQTVSGPGGIDRVAGSLAVTRALGNGYLKWPSLSFPPYQPYLPYITGEPVISSHVLSPSADLFLVLASDGLWERLSNDDAVNIVHRWSHRQALQGPSPSFPHLIPTTSDPSSLPPSTPAAALVEALMVRVAAVHHMGLRTLKCLPKGGQRRQIHDDVCVTVV 1174
            A  LT  H C NA E+K V +R+ D++ IR S  D  +        GI RVAGSL+VTRALG+ YLK    S PPY+  +PYIT EP +  H ++   D FL+LASDGLWE +    AV IV  +    A  G +P     IP  S           AALV   + R A+   + L  L  + KG QRR IHDD+  TV+
Sbjct:  325 AKVLTTTHDCNNADEIKRVVERSNDRNAIRMSKDDRLSCSEY----GIKRVAGSLSVTRALGDWYLKADEFSAPPYKAKVPYITAEPDVVVHHIT-KRDKFLILASDGLWEVVPPLLAVQIVTNYVTTAANAGEAP-----IPNAS-----------AALVHCALDRAASKEGLALHDLLAISKGPQRRSIHDDITCTVI 503
[Close]
BLAST of NO08G04310 vs. NCBI_GenBank
Match: XP_012201328.1 (hypothetical protein SPRG_07142 [Saprolegnia parasitica CBS 223.65] >KDO27870.1 hypothetical protein SPRG_07142 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 127.1 bits (318), Expect = 3.600e-25
Identity = 84/200 (42.00%), Postives = 108/200 (54.00%), Query Frame = 0 
Query:  974 ALALTDDHTCQNASEVKLVKQRTTDKHPIRKSAKDTRNAQTVSGPGGIDRVAGSLAVTRALGNGYLKWPSLSFPPYQPYLPYITGEPVISSHVLSPSADLFLVLASDGLWERLSNDDAVNIVHRWSHRQALQGPSPSFPHLIPTTSDPSSLPPSTPAAALVEALMVRVAAVHHMGLRTLKCLPKGGQRRQIHDDVCVTVV 1174
            A  LT  H C NA E+K V +R+ D++ IR S  D  +        GI RVAGSL+VTRALG+ YLK    S PPY+  +PYIT EP +  H ++   D FL+LASDGLWE +    AV IV  +    A  G +P     IP+ S           AALV   + R A+   + L  L  + KG QRR IHDD+  TV+
Sbjct:  325 AKVLTTTHDCNNADEIKRVVERSNDRNAIRMSKDDRLSCSEY----GIKRVAGSLSVTRALGDWYLKADEFSAPPYKAKVPYITAEPDVVVHHIT-KRDKFLILASDGLWEVVPPLLAVQIVTNYVTTAANAGEAP-----IPSAS-----------AALVHCALDRAASKEGLALHDLLAISKGPQRRTIHDDITCTVI 503
[Close]
BLAST of NO08G04310 vs. NCBI_GenBank
Match: OQR91073.1 (phosphatase 2C [Thraustotheca clavata])

HSP 1 Score: 124.8 bits (312), Expect = 1.800e-24
Identity = 81/202 (40.10%), Postives = 110/202 (54.46%), Query Frame = 0 
Query:  972 IKALALTDDHTCQNASEVKLVKQRTTDKHPIRKSAKDTRNAQTVSGPGGIDRVAGSLAVTRALGNGYLKWPSLSFPPYQPYLPYITGEPVISSHVLSPSADLFLVLASDGLWERLSNDDAVNIVHRWSHRQALQGPSPSFPHLIPTTSDPSSLPPSTPAAALVEALMVRVAAVHHMGLRTLKCLPKGGQRRQIHDDVCVTVV 1174
            + A  L+ +H C N  EVK V +R+ D++ IR S  D    +   G  GI RVAG+L+VTRALG+ YLK    S  PY+  +PYIT EP +  H ++   D F++LASDGLWE +S + AV IV  ++      G +P     IP+ S            ALV   + R A+   M L  L  + KG QRR IHDD+  TV+
Sbjct:  319 MSAKILSTNHDCNNPDEVKKVVERSKDRNAIRMSKDD----RVSFGEYGIKRVAGTLSVTRALGDWYLKAEEFSSAPYKSKVPYITAEPDVIVHTVT-KHDKFIILASDGLWEVISPELAVQIVANYATNAPNAGDAP-----IPSASQ-----------ALVHTALDRAASKEGMALHDLLAIAKGPQRRSIHDDITCTVI 499
[Close]
BLAST of NO08G04310 vs. NCBI_GenBank
Match: XP_002998754.1 (protein phosphatase 2C, putative [Phytophthora infestans T30-4] >EEY70107.1 protein phosphatase 2C, putative, partial [Phytophthora infestans T30-4])

HSP 1 Score: 122.9 bits (307), Expect = 6.900e-24
Identity = 77/215 (35.81%), Postives = 122/215 (56.74%), Query Frame = 0 
Query:  972 IKALALTDDHTCQNASEVKLVKQRTTDKHPIRKSAKDTRNAQTVSGPG--GIDRVAGSLAVTRALGNGYLKWPSLSFPPYQPYLPYITGEPVISSHVLSPSADLFLVLASDGLWERLSNDDAVNIVHRWSHRQALQGPSPSFPHLIPTTSDPSSLPPSTPAAALVEALMVRVAAVHHMGLRTLKCLPKGGQRRQIHDDVCVTVVQFDWRGGEGVQ 1185
            ++A  ++ DH+C N  E KLV +R+ D++ IR S  D       +GPG  G+ RVAGSLA+TRA G+ YLK   LS  P++  +PYIT EP I++ V    ++ +++LASDGLW+ ++  +AV+IV ++   Q                    SL  ST +AAL+ A++ ++A    + +  L  +P+G  RR+ HDD+  TVV  + + G   +
Sbjct:  130 LEATEVSVDHSCNNPLETKLVVERSHDRNAIRMSKDD-----QATGPGIIGVKRVAGSLAMTRAFGDFYLKCAELSSAPFKSKVPYITSEPSITT-VYMDGSEKYVILASDGLWDVMTPLEAVHIVAKFDPEQ--------------------SLFFSTASAALIHAVLEKIAHRDGLMMHELMSMPQGAVRRRFHDDITCTVVYIEHQNGSNTR 318
[Close]
BLAST of NO08G04310 vs. NCBI_GenBank
Match: ETI54685.1 (hypothetical protein F443_02541 [Phytophthora parasitica P1569] >ETI54686.1 hypothetical protein, variant 1 [Phytophthora parasitica P1569] >ETK94552.1 hypothetical protein L915_02416 [Phytophthora parasitica] >ETK94553.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETM01038.1 hypothetical protein L917_02317 [Phytophthora parasitica] >ETM01039.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETO83444.1 hypothetical protein F444_02536 [Phytophthora parasitica P1976] >ETO83445.1 hypothetical protein, variant 1 [Phytophthora parasitica P1976] >ETP24534.1 hypothetical protein F441_02483 [Phytophthora parasitica CJ01A1] >ETP24535.1 hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1] >KUG01933.1 protein phosphatase 2C 25 [Phytophthora nicotianae])

HSP 1 Score: 121.7 bits (304), Expect = 1.500e-23
Identity = 76/209 (36.36%), Postives = 119/209 (56.94%), Query Frame = 0 
Query:  972 IKALALTDDHTCQNASEVKLVKQRTTDKHPIRKSAKDTRNAQTVSGPGGIDRVAGSLAVTRALGNGYLKWPSLSFPPYQPYLPYITGEPVISSHVLSPSADLFLVLASDGLWERLSNDDAVNIVHRWSHRQALQGPSPSFPHLIPTTSDPSSLPPSTPAAALVEALMVRVAAVHHMGLRTLKCLPKGGQRRQIHDDVCVTVVQFDWRGG 1181
            ++A+ ++ DH+C N  E KLV +R+ D++ IR S  D     T +G  G+ RVAGSLA+TRA G+ YLK P LS  P++  +PYIT EP I++ V    ++ +++LASDGLW+ ++  +AV+IV ++   Q                    SL  ST +AAL+ A + ++A    + +  L  +  G  RR+ HDD+  TVV  + + G
Sbjct:  407 LQAIEVSVDHSCNNPQETKLVIERSHDRNAIRMSKDD---QATGAGIIGVKRVAGSLAMTRAFGDFYLKCPELSSAPFKSKVPYITSEPSITT-VYMNGSEKYVILASDGLWDVMTPQEAVHIVDKFDPAQ--------------------SLFFSTASAALIHAALEKIAHRDGLMMHELMSMTPGSVRRRFHDDITCTVVYIEHQNG 591
The following BLAST results are available for this feature:
BLAST of NO08G04310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26894.15.300e-10142.31protein phosphatase [Nannochloropsis gaditana][more]
CBN74456.14.100e-2941.52conserved unknown protein [Ectocarpus siliculosus][more]
AIG56378.18.600e-2740.98secreted protein [Achlya hypogyna][more]
OQR83857.19.600e-2640.59protein phosphatase 2C [Achlya hypogyna][more]
XP_009535128.12.800e-2536.84hypothetical protein PHYSODRAFT_522951, partial [P... [more]
XP_008604264.13.600e-2542.00hypothetical protein SDRG_00560 [Saprolegnia dicli... [more]
XP_012201328.13.600e-2542.00hypothetical protein SPRG_07142 [Saprolegnia paras... [more]
OQR91073.11.800e-2440.10phosphatase 2C [Thraustotheca clavata][more]
XP_002998754.16.900e-2435.81protein phosphatase 2C, putative [Phytophthora inf... [more]
ETI54685.11.500e-2336.36hypothetical protein F443_02541 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL105nonsL105Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006535NSK006535Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G04310.1NO08G04310.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO08G04310.2NO08G04310.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO08G04310.3NO08G04310.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|638012gene_3782Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100103g5gene3643Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G04310.1NO08G04310.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO08G04310.2NO08G04310.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO08G04310.3NO08G04310.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G04310 ID=NO08G04310|Name=NO08G04310|organism=Nannochloropsis oceanica|type=gene|length=4995bp
ACGACAGAGGAAGGCTGGCGTTTGTGCGGCAAAGGAGTAGAGAGTGAGTG
AGTGAGAATGTCCGCCGGTATCAAGCGCAGTAATAGCGGCAATGCTGGCG
GTGGAGAGGGGGGAGGACGACGGGgtaagcttcagcgtttcctgtcccca
gaatttcctattcctcccagcttcctctcctcacaccgctcacctttccc
tcccactcctgcctacactcaagGTACGCCCATCCCACCACCACCACCCT
CCTTTCTTGCGCCTCTCTTCGCGGACCCCATCAAGTTTTTGCAGCTTTTG
GAGGATCTGCTGGGGCTGATCGGAGAAAGGGAAGGAGGGCGCGGGGGAGG
GAGGGCAGAGAGAGGGAAAGGCGAGAAAGCTACCGCAGCATCAGCAGCAG
CACCAGCAGCAGCAGCTTCTGGTATCGTATTGTCACAAGGAGGTGAATTG
GAAGGAATTAAAGAAGGTAGGGGGGAAAGATTTGCATACCTGGTCGGTGT
TGAAGAGGTCAACGCGGTGTCGGTCTCCGAAGGGACCGAGCGGTTGGGGC
AAGCCCTCGCTCAGCGTCTGGGCGCCTCCTTTTTCTTCCTCCAGCTCCAT
CACCCTTCGTCGTCCTCCTCATCATCACTGGCTCTCCCTCCTCTCGTCCT
GGCCTCCACCCCTGCCTCGCCTCCGTCCGTCTTGCTGTGTGCTGCGTGGG
TGGGGGAAGGAAATGGGGCCCTGATTGCAGGGGCGGTGCAATTGCTGGAG
ACGAGGGGCTTTAGgtaacgaaggaaggatagagaggaaaatggacggag
ggagggagggaggaaggaacggagccatacgtaggcatatttggagggcg
cgtccagcacgcacttataaagagtgttcgctcatgccattcttcccctt
cctcccccctccctccccccctccctccccccctccttcttaatagGGTG
GCCGGTCTGGCCACTCTGCGATTTGAGAGCACACCGGCGACAGAGGGCTT
GAAAGCTGCGTTCCCCATCTTTGCCATAAGCCGCGCGAAAGgtaggaggg
agggagagagggagcgaaggaggaagaaagggttgatcaatcctcacttt
ttaatttcaatagGGGAAGGTCCTCGTCCACTCGCATTTGAAGCCAAAAA
TAGGTCCAACAACGGCAGTAACAGCAACTGCAGCAGCAGCAACTGCAGCA
GCAGCAGCAGCAGCAGTAGCAGCAGCAGTAGCAGTAGAGTTAGGGGCAAT
GAAAACGGATGTGGAAAATGCCTGTCTTCCTCCTTCGGCTCCTCCTCTAC
ATCTTCCTCTTCCTCCCCTTCCTCATCCGCGTCTACTCCTACTCCCCCCA
TCCCTATCACCAGTGGGAGAGGAGGAGGAGGAAGAGGCAAGGGAGGAGGA
GGAGGAAACGAGGGAGAAGGGGGTGGAGGAGGATGCCACGGTCAGGGGAA
GGGAGACAGAACGCCCTCAACAGCAGCAGCAGCCATGCCTGCGATGACGA
GAACGATGCCTTCAGCTACCGCTATGAAATCTACGCCCACGCCTCTCCCT
CTTGTAGTGGAGGAAAAGAATGGCAGGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCAG
CAGGGAAGGAGAAGGACGGAAAAGCCGGTGGCCGCACGCCTCCGACGCAT
GAACGAAAAGTGGAGGAAGGCGAGGAGGAACATGAGGGAAGAGGCGAGGG
CGAGGGAGGAGGAGGAAGCAGTAGCAAAAAGACGCGTCTGAGCCCCCCAG
CGCAGGAGCAGCAACAGCAGCGGCAACCGCAACAGCCACAACAGCAGCAG
AGGCAACGACAACGGCCGTCTACAGAGACTGACATATCCTCTTTCCCTCC
TTTCCTCGTCCCGGCAGCAGCCCCGGGCCCAGGAGCTCTCTCGGAGCCGA
ACGCCTCCCTCCATCCCTCCCCCCCTCCTTCCCTTCCTTGTTTGGTCCTC
AACCATTCCACCGCCTTCGTGGAAAGCAACGACCCGGGCGAAGACCGTTA
CACCAACCACCCGCCCGGCCTCCCACCTGCCATTCCTCTCCTCGACCCGA
CAGCCACAGTCAAAAAGGAAGGGGGAGGGAAGTCAGACAGGCCCTTCTCT
TCCTCCTCCACCAAAGACACAGGGCTCTCCTCCCAGCCCTCTCCCTCCTC
ACGCCTGACCCGACAGGCTCGAGGAAAAGGAGGAAGGGAGGGGAGGGAGG
GAGGGAGGGAGGGAGGGAGGGAGGACGTGGGCATCTACATTATCCTAGAT
GGGCATGGCGGGGGCCGGGCTAGCGAGTACATGTCGCAAgtaaggcaggg
gggaggggggagggagggaaggagggcatgtgctcacactattttctcaa
acatttttagCACTTGGTTCCCGCCGTCCTTGCCCGGCTTCCTCCCTCTT
CCACCTTTTCCTCCCTCCCCTCCTCCTCCTCTTCTTCTTCATCCTCCTCC
TTTACCACTACCCTCACCCCACCTCCGCCTGAGGAGATGGAAATAAAAGT
GAAGACAGCGCTGAGAGAGGCGTTCCTTGCTGTAGATAACGACTTTCTCT
CATCGCTAGCTGAGGGAGTGACGCTCgtaagaaggggagggagggagggc
gggaggaaagaagggaaaaagggagggaaaggacctgtgtttttgccgaa
tcttgagccgagactgtgcgtggcaaagttgaactcaccctttccttctt
ccctccctctcaccccccttcctccccttccccgccccttcttctccctg
cctagGAGCAAGCCAAGGGGTTTTGGAATGCGGGCACGTGCGTGGTCCTT
GCCCTTATAATGGGAAATGTGCTCTATGTGGCGCACGTTGGAGACTGCCG
GGCCGTGCTGGCACAGAGgtgagggcaaggaaaaagcgagggagggagga
aggaattggaaaaggggaaaggagatggatgagacagaagaaagaggcaa
agcaagcgttgtcaaaggcaggaatttatatacctatacctcactctcct
cctcccctgctccccctcctccccctcctcccctaccttttcctcctcct
gttgctcctcctccccttccctcgtcgtaaaaaacacacaagAGCGAGCC
CTCTCCCTTCTCGGGCGCCTTCCCGGGAGGTCAGCATGGCGGCCGTGGCT
GCTGTTGCAGCTGTTACCGCTGACGTTGTCGGGCTGGCGGTCGGACGAAG
GGGAGAAGAAGCAGCGGGAGCAGCAGCAGGAGCGGTGGGAGGGAGGGCAG
GCTCCCCGGTTCCACTTATTTGCCCTTCCTCGTCACCGTGCTCCCCTTCC
TCCTCTTTGTGCTCGTCGCCAAAGgtaggattgtgtgggcgcggggaagg
agggaagaagggtgaaggaggaggagaaggaagaggaggaggaggaggag
gaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggagga
ggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggagg
aggaaagctagccgccgccgctgctgcagctgctgctgctgctgctgccg
ccgccgctgtggtctcaagttataagcactcaccgttccctcctatactc
ccccctcccattccccctttctccttttctcaaagCCAAAAGCCTCCCCC
GCCTCACCCTTATCATTTCCCGCCAGCACCTCCTCCTCCTTCCCCCTCCC
CCCTCTTGGGCGCTCCTCTCCTCGCCGCACCTGTGCATTAGACCGGCTCC
TCCCTCCCCCCCCGCCCATCAAGGCTCTCGCCCTCACGGATGACCACACG
TGCCAGAACGCGAGCGAGgtacgtccttctcaggtgtctgccactgcctt
tctacccccgaatgttacctctctccctctctccctccctccctctctcc
ctccctccctctctccctccctcccacattccctcctcagGTGAAGCTCG
TGAAGCAACGCACCACCGACAAGCACCCTATCCGCAAGAGCGCTAAAGAC
ACTCGCAACGCTCAGACGGTGTCAGGCCCAGGAGGGATCGATCGCGTCGC
AGgtaaagcatccatcctccctcccgccttccctccctccctcccttcct
ctagagtgacaccttctgaaacccttcacagttcaagacatcgatccaag
tttttcaccttatcccctttcccccccctgaagGCTCCCTGGCCGTGACT
CGTGCCTTAGGAAATGGATACCTCAAGTGGCCCTCCCTCTCCTTCCCGCC
GTACCAgtacgtattaccatgacgaagggagggaaagagaggagaagagg
gttgattgcctggcatctgagacgtcaccacttgcatacactgaccacca
cttccctcctccctgtctcccttcccccttccttcttcccccccctcttc
ccttagGCCCTACCTGCCTTACATCACCGGTGAGCCCGTCATCTCCTCTC
ACGTCCTCTCCCCCTCTGCCGATCTCTTTCTCGTCCTCGCCTCGGATGGC
CTGTGGGAGCGTCTTTCCAACGATGACGCCGTCAATATCGTGCACAGATG
GTCGCACCGGCAAGCCCTGCAAGGCCCCTCTCCCTCCTTTCCTCACTTGA
TTCCGACCACATCTGACCCCTCCTCCCTTCCGCCCTCCACCCCGGCGGCC
GCACTGGTGGAGGCCCTGATGGTGCGCGTTGCGGCGGTGCATCACATGGG
CCTGAGGACGCTGAAGTGCCTGCCCAAGGGAGGGCAGCGGCGGCAGATCC
ACGACGATGTGTGTGTGACAGTGGTGCAGTTTGACTGGCGGGGGGGAGAG
GGGGTGCAAGAGGGCTAGAAAAGGATGCAATATGTATCGTGTGTCATAAA
AATACGACTGTGGCTGTGTGAAAAAGCGAACCATGACACGAAACACACGA
TATGGGAAAAAAATCCACTCATTGATGTCAAACAGACTGTGCTAA
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protein sequence of NO08G04310.1

>NO08G04310.1-protein ID=NO08G04310.1-protein|Name=NO08G04310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1163bp
MSAGIKRSNSGNAGGGEGGGRRGTPIPPPPPSFLAPLFADPIKFLQLLED
LLGLIGEREGGRGGGRAERGKGEKATAASAAAPAAAASGIVLSQGGELEG
IKEGRGERFAYLVGVEEVNAVSVSEGTERLGQALAQRLGASFFFLQLHHP
SSSSSSSLALPPLVLASTPASPPSVLLCAAWVGEGNGALIAGAVQLLETR
GFRVAGLATLRFESTPATEGLKAAFPIFAISRAKGEGPRPLAFEAKNRSN
NGSNSNCSSSNCSSSSSSSSSSSSSRVRGNENGCGKCLSSSFGSSSTSSS
SSPSSSASTPTPPIPITSGRGGGGRGKGGGGGNEGEGGGGGCHGQGKGDR
TPSTAAAAMPAMTRTMPSATAMKSTPTPLPLVVEEKNGRQQQQQQQQQQQ
QQQQQQQQQQQQPAGKEKDGKAGGRTPPTHERKVEEGEEEHEGRGEGEGG
GGSSSKKTRLSPPAQEQQQQRQPQQPQQQQRQRQRPSTETDISSFPPFLV
PAAAPGPGALSEPNASLHPSPPPSLPCLVLNHSTAFVESNDPGEDRYTNH
PPGLPPAIPLLDPTATVKKEGGGKSDRPFSSSSTKDTGLSSQPSPSSRLT
RQARGKGGREGREGGREGGREDVGIYIILDGHGGGRASEYMSQHLVPAVL
ARLPPSSTFSSLPSSSSSSSSSSFTTTLTPPPPEEMEIKVKTALREAFLA
VDNDFLSSLAEGVTLEQAKGFWNAGTCVVLALIMGNVLYVAHVGDCRAVL
AQRASPLPSRAPSREVSMAAVAAVAAVTADVVGLAVGRRGEEAAGAAAGA
VGGRAGSPVPLICPSSSPCSPSSSLCSSPKVGLCGRGEGGKKGEGGGEGR
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGKLAAAAAAAA
AAAAAAAAVVSSYKHSPTSSSFPLPPLGRSSPRRTCALDRLLPPPPPIKA
LALTDDHTCQNASEVKLVKQRTTDKHPIRKSAKDTRNAQTVSGPGGIDRV
AGSLAVTRALGNGYLKWPSLSFPPYQPYLPYITGEPVISSHVLSPSADLF
LVLASDGLWERLSNDDAVNIVHRWSHRQALQGPSPSFPHLIPTTSDPSSL
PPSTPAAALVEALMVRVAAVHHMGLRTLKCLPKGGQRRQIHDDVCVTVVQ
FDWRGGEGVQEG*
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protein sequence of NO08G04310.2

>NO08G04310.2-protein ID=NO08G04310.2-protein|Name=NO08G04310.2|organism=Nannochloropsis oceanica|type=polypeptide|length=1187bp
MSAGIKRSNSGNAGGGEGGGRRGTPIPPPPPSFLAPLFADPIKFLQLLED
LLGLIGEREGGRGGGRAERGKGEKATAASAAAPAAAASGIVLSQGGELEG
IKEGRGERFAYLVGVEEVNAVSVSEGTERLGQALAQRLGASFFFLQLHHP
SSSSSSSLALPPLVLASTPASPPSVLLCAAWVGEGNGALIAGAVQLLETR
GFRVAGLATLRFESTPATEGLKAAFPIFAISRAKGRREGERERRRKKGLI
NPHFLISIGEGPRPLAFEAKNRSNNGSNSNCSSSNCSSSSSSSSSSSSSR
VRGNENGCGKCLSSSFGSSSTSSSSSPSSSASTPTPPIPITSGRGGGGRG
KGGGGGNEGEGGGGGCHGQGKGDRTPSTAAAAMPAMTRTMPSATAMKSTP
TPLPLVVEEKNGRQQQQQQQQQQQQQQQQQQQQQQQPAGKEKDGKAGGRT
PPTHERKVEEGEEEHEGRGEGEGGGGSSSKKTRLSPPAQEQQQQRQPQQP
QQQQRQRQRPSTETDISSFPPFLVPAAAPGPGALSEPNASLHPSPPPSLP
CLVLNHSTAFVESNDPGEDRYTNHPPGLPPAIPLLDPTATVKKEGGGKSD
RPFSSSSTKDTGLSSQPSPSSRLTRQARGKGGREGREGGREGGREDVGIY
IILDGHGGGRASEYMSQHLVPAVLARLPPSSTFSSLPSSSSSSSSSSFTT
TLTPPPPEEMEIKVKTALREAFLAVDNDFLSSLAEGVTLEQAKGFWNAGT
CVVLALIMGNVLYVAHVGDCRAVLAQRASPLPSRAPSREVSMAAVAAVAA
VTADVVGLAVGRRGEEAAGAAAGAVGGRAGSPVPLICPSSSPCSPSSSLC
SSPKVGLCGRGEGGKKGEGGGEGRGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGKLAAAAAAAAAAAAAAAAVVSSYKHSPTSSSFPLPP
LGRSSPRRTCALDRLLPPPPPIKALALTDDHTCQNASEVKLVKQRTTDKH
PIRKSAKDTRNAQTVSGPGGIDRVAGSLAVTRALGNGYLKWPSLSFPPYQ
PYLPYITGEPVISSHVLSPSADLFLVLASDGLWERLSNDDAVNIVHRWSH
RQALQGPSPSFPHLIPTTSDPSSLPPSTPAAALVEALMVRVAAVHHMGLR
TLKCLPKGGQRRQIHDDVCVTVVQFDWRGGEGVQEG*
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protein sequence of NO08G04310.3

>NO08G04310.3-protein ID=NO08G04310.3-protein|Name=NO08G04310.3|organism=Nannochloropsis oceanica|type=polypeptide|length=1090bp
MSAGIKRSNSGNAGGGEGGGRRGTPIPPPPPSFLAPLFADPIKFLQLLED
LLGLIGEREGGRGGGRAERGKGEKATAASAAAPAAAASGIVLSQGGELEG
IKEGRGERFAYLVGVEEVNAVSVSEGTERLGQALAQRLGASFFFLQLHHP
SSSSSSSLALPPLVLASTPASPPSVLLCAAWVGEGNGALIAGAVQLLETR
GFRVAGLATLRFESTPATEGLKAAFPIFAISRAKGEGPRPLAFEAKNRSN
NGSNSNCSSSNCSSSSSSSSSSSSSRVRGNENGCGKCLSSSFGSSSTSSS
SSPSSSASTPTPPIPITSGRGGGGRGKGGGGGNEGEGGGGGCHGQGKGDR
TPSTAAAAMPAMTRTMPSATAMKSTPTPLPLVVEEKNGRQQQQQQQQQQQ
QQQQQQQQQQQQPAGKEKDGKAGGRTPPTHERKVEEGEEEHEGRGEGEGG
GGSSSKKTRLSPPAQEQQQQRQPQQPQQQQRQRQRPSTETDISSFPPFLV
PAAAPGPGALSEPNASLHPSPPPSLPCLVLNHSTAFVESNDPGEDRYTNH
PPGLPPAIPLLDPTATVKKEGGGKSDRPFSSSSTKDTGLSSQPSPSSRLT
RQARGKGGREGREGGREGGREDVGIYIILDGHGGGRASEYMSQHLVPAVL
ARLPPSSTFSSLPSSSSSSSSSSFTTTLTPPPPEEMEIKVKTALREAFLA
VDNDFLSSLAEGVTLEQAKGFWNAGTCVVLALIMGNVLYVAHVGDCRAVL
AQRASPLPSRAPSREVSMAAVAAVAAVTADVVGLAVGRRGEEAAGAAAGA
VGGRAGSPVPLICPSSSPCSPSSSLCSSPKPKASPASPLSFPASTSSSFP
LPPLGRSSPRRTCALDRLLPPPPPIKALALTDDHTCQNASEVKLVKQRTT
DKHPIRKSAKDTRNAQTVSGPGGIDRVAGSLAVTRALGNGYLKWPSLSFP
PYQPYLPYITGEPVISSHVLSPSADLFLVLASDGLWERLSNDDAVNIVHR
WSHRQALQGPSPSFPHLIPTTSDPSSLPPSTPAAALVEALMVRVAAVHHM
GLRTLKCLPKGGQRRQIHDDVCVTVVQFDWRGGEGVQEG*
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Synonyms
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