NO08G04310.3, NO08G04310.3 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO08G04310.3
Unique Name	NO08G04310.3
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3454
Alignment location	chr8:1258739..1263733 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr8	genome	chr8:1258739..1263733 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO08G04310.3 vs.
Match: EWM26894.1 (protein phosphatase [Nannochloropsis gaditana])

HSP 1 Score: 514.2 bits (1323), Expect = 9.700e-142
Identity = 473/1092 (43.32%), Postives = 588/1092 (53.85%), Query Frame = 0

Query:   30 PPSFLAPLFADPIKFLQLLEDLLGLIGEREGGRGGGRAERGKGEKATAASAAAPAAAASGIVLSQGGELEGIKEGRGERFAYLVGVEEVNAVSVSEGTERLGQALAQRLGASFFFLQLHHPSSSSSSSLALPPLVLASTPASPPSVLLCAAWVGEGNGALIAGAVQLLETRGFRVAGLATLRFESTPATEGLKAAFPIFAISRAKGEGPRPLAFEAKNRSNNGSNSNCSSSNCSSSSSSSSSSSSSRVRGNENGCGKCLSSSFGSSSTSSSSSPS----SSASTPTPPIPITSGRGGGGRGKGGGGGNEGEGGGGGCHGQGKGDRTPSTAAAAMPAMTRTMPSATAMKSTPTPLPLVVEEKNGRQQQQQQQQQQQQQQQQQQQQQQQPAGKEKDG--KAGGRTPPTHERKVEEGEEEHEGRGEGEGGGGSSSKKTRLSPPAQEQQQQRQPQQPQQQQRQRQRPSTETDISSFPPFLVPAAAPGPGALSEPNASLHPSPPPSLPCLVLNHSTAFVESNDPGEDRYTNHPPGLPPAIPLLDPTATVKKEGG--------------GKSDRPFSSSSTKDTGL-----SSQPSPSSRLTRQARG---------KGGRE-GREGGREGGREDVGIYIILDGHGGGRASEYMSQHLVPAVLARLPPSSTFSSLPSSSSSSSSSSFTTTLTPPPPEEMEIKVKTALREAFLAVDNDFLSSLAEGVTLEQAKGFWNAGTCVVLALIMGNVLYVAHVGDCRAVLAQRASPLPSRAPSREVSMAAVAAVAAVTADVVGLAVGRRGEEAAGAAAGAVGGRAGSPVPLICPSSSPCSPSSSLCSSPKPKASPASPLSFPASTSSSFPLPPL-GRSSPRRTCALDRLLPPPPPIKALALTDDHTCQNASEVKLVKQRTTDKHPIRKSAKDTRNAQTVSGPGGIDRVAGSLAVTRALGNGYLKWPSLSFPPYQPYLPYITGEPVISSHVLSPSADLFLVLASDGLWERLSNDDAVNIVHRWSHRQALQGPSPSFPHLIPTTSDP-SSLPPSTPAAALVEALMVRVAAVHHMGLRTLKCLPKGGQRRQIHDDVCVTVVQFDWRGGE 1085
            P  FLAPLFADP+KF QLLEDL+ LI  REG          + E+ + A ++A         L  G   +G       +  +L+ VEE  + S +E + RL +ALA +L   +  + L  P SS   +   P     + P +   VLLC AW+GEGNG LI  A + L+    RV GL TLRFE   AT+ L+  FPIFA S A+G GPRPL+ +    + N   SN S  N +SS   S  S S   RG ++      S++  S STSSS SPS    +S S       IT+ R    R          E              T     A +P      P      S     P  +  ++ R Q   + +Q+++ ++   +     A  E+DG  +A  + P     + EEG+ E   R  G  G     +K   +P   + +      QP Q+      P+        P      AAP P           PS PPSLP L L+HSTA VESNDPGEDR+ +HPP LPP++PL   T      GG                +    +SSST    L     S  PSP S                 +G R+  R G  +G R DVG+Y++LDGHGG RAS+YMS+HL+PAVL RL P           SSS+SSS T      P  E E KVKTAL +AFLAVD  FL+SL+  +T EQAKG+WNAG+C VLAL++G +LYVAHVGDCRAVL QR  P P+ +PS     ++ A  AA+T+  V    G +  E   A  G     A +P+P      S  SP SS  +      SP  P + P S     P PPL  RSSPRRTCAL RL PPP P+ AL LT DH CQNASEVKLVKQRTTDKH IRKSAKD R+A   SG GGIDRVAGSLAVTRALGNGYLKWPSLSFPPY  +LPYITGEPV++++ LSP+ DLFL+LASDGLWE LS+ DAV  V  W HR+ LQG      H  P++S   +S  P TPAAAL E +MVRVA  H+M L TLK LP+GGQRRQIHDD+CVTVVQF W   E
Sbjct:    6 PSFFLAPLFADPLKFSQLLEDLMKLIQGREGTWKPAPESEVEPERDSFAPSSA---------LGAGWNTQG-------KITHLIAVEE-ESHSATESSARLAEALATKLTVGYSTMGLPPPCSSQIPTFNPPA---PAPPGARHHVLLCVAWIGEGNGLLITRAAEALQRLDNRVQGLVTLRFERNEATQALQNNFPIFAKSWARGSGPRPLSPD----TCNAPVSNFSGRNFTSSGKKSRKSDSPD-RGAQSPPTPPCSTTPTSPSTSSSLSPSCLGGASGSAEQATTSITAHRTSTTR--------PVENAVKVATLAASRSTTAVLETARIPPKCARPPLGGDCFSPTLSTPGSIGVEDERIQGCGEGRQKEESEKCPGEGGAMEAQGERDGPSEAQRKRPDLSGVQREEGQAEEALRVSGSQGASMMQQKMEQAP---KDKCWTSCCQPSQRDAMSSPPTVPLLDGFLPATTQSLAAPTP-----------PSCPPSLPALFLSHSTAVVESNDPGEDRHASHPPALPPSLPL---TLHGHSSGGAPILFGEVAACAFPAPASNRTTSSSTSSLSLHAPSSSPVPSPPSSCPPPIPAPTPLALETFRGERDAARAGEGKGLRTDVGVYLVLDGHGGSRASQYMSEHLIPAVLERLGP---------CLSSSASSSLT------PSAEEEEKVKTALNDAFLAVDRAFLTSLSANLTPEQAKGYWNAGSCAVLALVVGRMLYVAHVGDCRAVLGQRVLP-PTPSPSSPPQTSSAANAAALTSRAVS---GAKPGEEGRADKGDDENIARAPLP------SASSPRSS--NRRSASTSPVPPSTLPLSAPWP-PQPPLPSRSSPRRTCALHRLYPPPSPVTALVLTRDHNCQNASEVKLVKQRTTDKHAIRKSAKDARSAHYASGVGGIDRVAGSLAVTRALGNGYLKWPSLSFPPYLQHLPYITGEPVVTAYELSPTRDLFLLLASDGLWEFLSSKDAVQTVQAWWHRETLQGQL----HRPPSSSTAYTSQHPCTPAAALAEEMMVRVARSHYMDLNTLKRLPRGGQRRQIHDDLCVTVVQFQWEKNE 1015

The following BLAST results are available for this feature:

BLAST of NO08G04310.3 vs.

BLAST of NO08G04310.3 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM26894.1	9.700e-142	43.32	protein phosphatase [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO08G04310	NO08G04310	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO08G04310.3	NO08G04310.3-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO08G04310.3.cds1	NO08G04310.3.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G04310.3.cds2	NO08G04310.3.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G04310.3.cds3	NO08G04310.3.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G04310.3.cds4	NO08G04310.3.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G04310.3.cds5	NO08G04310.3.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G04310.3.cds6	NO08G04310.3.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G04310.3.cds7	NO08G04310.3.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G04310.3.cds8	NO08G04310.3.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G04310.3.cds9	NO08G04310.3.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G04310.3.cds10	NO08G04310.3.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G04310.3.cds11	NO08G04310.3.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr8:1258739..1263733+
coding sequence from alignment at chr8:1258739..1263733+

mRNA sequence

>NO08G04310.3 ID=NO08G04310.3|Name=NO08G04310.3|organism=Nannochloropsis oceanica|type=mRNA|length=3454bp
ACGACAGAGGAAGGCTGGCGTTTGTGCGGCAAAGGAGTAGAGAGTGAGTG
AGTGAGAATGTCCGCCGGTATCAAGCGCAGTAATAGCGGCAATGCTGGCG
GTGGAGAGGGGGGAGGACGACGGGGTACGCCCATCCCACCACCACCACCC
TCCTTTCTTGCGCCTCTCTTCGCGGACCCCATCAAGTTTTTGCAGCTTTT
GGAGGATCTGCTGGGGCTGATCGGAGAAAGGGAAGGAGGGCGCGGGGGAG
GGAGGGCAGAGAGAGGGAAAGGCGAGAAAGCTACCGCAGCATCAGCAGCA
GCACCAGCAGCAGCAGCTTCTGGTATCGTATTGTCACAAGGAGGTGAATT
GGAAGGAATTAAAGAAGGTAGGGGGGAAAGATTTGCATACCTGGTCGGTG
TTGAAGAGGTCAACGCGGTGTCGGTCTCCGAAGGGACCGAGCGGTTGGGG
CAAGCCCTCGCTCAGCGTCTGGGCGCCTCCTTTTTCTTCCTCCAGCTCCA
TCACCCTTCGTCGTCCTCCTCATCATCACTGGCTCTCCCTCCTCTCGTCC
TGGCCTCCACCCCTGCCTCGCCTCCGTCCGTCTTGCTGTGTGCTGCGTGG
GTGGGGGAAGGAAATGGGGCCCTGATTGCAGGGGCGGTGCAATTGCTGGA
GACGAGGGGCTTTAGGGTGGCCGGTCTGGCCACTCTGCGATTTGAGAGCA
CACCGGCGACAGAGGGCTTGAAAGCTGCGTTCCCCATCTTTGCCATAAGC
CGCGCGAAAGGGGAAGGTCCTCGTCCACTCGCATTTGAAGCCAAAAATAG
GTCCAACAACGGCAGTAACAGCAACTGCAGCAGCAGCAACTGCAGCAGCA
GCAGCAGCAGCAGTAGCAGCAGCAGTAGCAGTAGAGTTAGGGGCAATGAA
AACGGATGTGGAAAATGCCTGTCTTCCTCCTTCGGCTCCTCCTCTACATC
TTCCTCTTCCTCCCCTTCCTCATCCGCGTCTACTCCTACTCCCCCCATCC
CTATCACCAGTGGGAGAGGAGGAGGAGGAAGAGGCAAGGGAGGAGGAGGA
GGAAACGAGGGAGAAGGGGGTGGAGGAGGATGCCACGGTCAGGGGAAGGG
AGACAGAACGCCCTCAACAGCAGCAGCAGCCATGCCTGCGATGACGAGAA
CGATGCCTTCAGCTACCGCTATGAAATCTACGCCCACGCCTCTCCCTCTT
GTAGTGGAGGAAAAGAATGGCAGGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCAGCAG
GGAAGGAGAAGGACGGAAAAGCCGGTGGCCGCACGCCTCCGACGCATGAA
CGAAAAGTGGAGGAAGGCGAGGAGGAACATGAGGGAAGAGGCGAGGGCGA
GGGAGGAGGAGGAAGCAGTAGCAAAAAGACGCGTCTGAGCCCCCCAGCGC
AGGAGCAGCAACAGCAGCGGCAACCGCAACAGCCACAACAGCAGCAGAGG
CAACGACAACGGCCGTCTACAGAGACTGACATATCCTCTTTCCCTCCTTT
CCTCGTCCCGGCAGCAGCCCCGGGCCCAGGAGCTCTCTCGGAGCCGAACG
CCTCCCTCCATCCCTCCCCCCCTCCTTCCCTTCCTTGTTTGGTCCTCAAC
CATTCCACCGCCTTCGTGGAAAGCAACGACCCGGGCGAAGACCGTTACAC
CAACCACCCGCCCGGCCTCCCACCTGCCATTCCTCTCCTCGACCCGACAG
CCACAGTCAAAAAGGAAGGGGGAGGGAAGTCAGACAGGCCCTTCTCTTCC
TCCTCCACCAAAGACACAGGGCTCTCCTCCCAGCCCTCTCCCTCCTCACG
CCTGACCCGACAGGCTCGAGGAAAAGGAGGAAGGGAGGGGAGGGAGGGAG
GGAGGGAGGGAGGGAGGGAGGACGTGGGCATCTACATTATCCTAGATGGG
CATGGCGGGGGCCGGGCTAGCGAGTACATGTCGCAACACTTGGTTCCCGC
CGTCCTTGCCCGGCTTCCTCCCTCTTCCACCTTTTCCTCCCTCCCCTCCT
CCTCCTCTTCTTCTTCATCCTCCTCCTTTACCACTACCCTCACCCCACCT
CCGCCTGAGGAGATGGAAATAAAAGTGAAGACAGCGCTGAGAGAGGCGTT
CCTTGCTGTAGATAACGACTTTCTCTCATCGCTAGCTGAGGGAGTGACGC
TCGAGCAAGCCAAGGGGTTTTGGAATGCGGGCACGTGCGTGGTCCTTGCC
CTTATAATGGGAAATGTGCTCTATGTGGCGCACGTTGGAGACTGCCGGGC
CGTGCTGGCACAGAGAGCGAGCCCTCTCCCTTCTCGGGCGCCTTCCCGGG
AGGTCAGCATGGCGGCCGTGGCTGCTGTTGCAGCTGTTACCGCTGACGTT
GTCGGGCTGGCGGTCGGACGAAGGGGAGAAGAAGCAGCGGGAGCAGCAGC
AGGAGCGGTGGGAGGGAGGGCAGGCTCCCCGGTTCCACTTATTTGCCCTT
CCTCGTCACCGTGCTCCCCTTCCTCCTCTTTGTGCTCGTCGCCAAAGCCA
AAAGCCTCCCCCGCCTCACCCTTATCATTTCCCGCCAGCACCTCCTCCTC
CTTCCCCCTCCCCCCTCTTGGGCGCTCCTCTCCTCGCCGCACCTGTGCAT
TAGACCGGCTCCTCCCTCCCCCCCCGCCCATCAAGGCTCTCGCCCTCACG
GATGACCACACGTGCCAGAACGCGAGCGAGGTGAAGCTCGTGAAGCAACG
CACCACCGACAAGCACCCTATCCGCAAGAGCGCTAAAGACACTCGCAACG
CTCAGACGGTGTCAGGCCCAGGAGGGATCGATCGCGTCGCAGGCTCCCTG
GCCGTGACTCGTGCCTTAGGAAATGGATACCTCAAGTGGCCCTCCCTCTC
CTTCCCGCCGTACCAGCCCTACCTGCCTTACATCACCGGTGAGCCCGTCA
TCTCCTCTCACGTCCTCTCCCCCTCTGCCGATCTCTTTCTCGTCCTCGCC
TCGGATGGCCTGTGGGAGCGTCTTTCCAACGATGACGCCGTCAATATCGT
GCACAGATGGTCGCACCGGCAAGCCCTGCAAGGCCCCTCTCCCTCCTTTC
CTCACTTGATTCCGACCACATCTGACCCCTCCTCCCTTCCGCCCTCCACC
CCGGCGGCCGCACTGGTGGAGGCCCTGATGGTGCGCGTTGCGGCGGTGCA
TCACATGGGCCTGAGGACGCTGAAGTGCCTGCCCAAGGGAGGGCAGCGGC
GGCAGATCCACGACGATGTGTGTGTGACAGTGGTGCAGTTTGACTGGCGG
GGGGGAGAGGGGGTGCAAGAGGGCTAGAAAAGGATGCAATATGTATCGTG
TGTCATAAAAATACGACTGTGGCTGTGTGAAAAAGCGAACCATGACACGA
AACACACGATATGGGAAAAAAATCCACTCATTGATGTCAAACAGACTGTG
CTAA

protein sequence of NO08G04310.3

>NO08G04310.3-protein ID=NO08G04310.3-protein|Name=NO08G04310.3|organism=Nannochloropsis oceanica|type=polypeptide|length=1090bp
MSAGIKRSNSGNAGGGEGGGRRGTPIPPPPPSFLAPLFADPIKFLQLLED
LLGLIGEREGGRGGGRAERGKGEKATAASAAAPAAAASGIVLSQGGELEG
IKEGRGERFAYLVGVEEVNAVSVSEGTERLGQALAQRLGASFFFLQLHHP
SSSSSSSLALPPLVLASTPASPPSVLLCAAWVGEGNGALIAGAVQLLETR
GFRVAGLATLRFESTPATEGLKAAFPIFAISRAKGEGPRPLAFEAKNRSN
NGSNSNCSSSNCSSSSSSSSSSSSSRVRGNENGCGKCLSSSFGSSSTSSS
SSPSSSASTPTPPIPITSGRGGGGRGKGGGGGNEGEGGGGGCHGQGKGDR
TPSTAAAAMPAMTRTMPSATAMKSTPTPLPLVVEEKNGRQQQQQQQQQQQ
QQQQQQQQQQQQPAGKEKDGKAGGRTPPTHERKVEEGEEEHEGRGEGEGG
GGSSSKKTRLSPPAQEQQQQRQPQQPQQQQRQRQRPSTETDISSFPPFLV
PAAAPGPGALSEPNASLHPSPPPSLPCLVLNHSTAFVESNDPGEDRYTNH
PPGLPPAIPLLDPTATVKKEGGGKSDRPFSSSSTKDTGLSSQPSPSSRLT
RQARGKGGREGREGGREGGREDVGIYIILDGHGGGRASEYMSQHLVPAVL
ARLPPSSTFSSLPSSSSSSSSSSFTTTLTPPPPEEMEIKVKTALREAFLA
VDNDFLSSLAEGVTLEQAKGFWNAGTCVVLALIMGNVLYVAHVGDCRAVL
AQRASPLPSRAPSREVSMAAVAAVAAVTADVVGLAVGRRGEEAAGAAAGA
VGGRAGSPVPLICPSSSPCSPSSSLCSSPKPKASPASPLSFPASTSSSFP
LPPLGRSSPRRTCALDRLLPPPPPIKALALTDDHTCQNASEVKLVKQRTT
DKHPIRKSAKDTRNAQTVSGPGGIDRVAGSLAVTRALGNGYLKWPSLSFP
PYQPYLPYITGEPVISSHVLSPSADLFLVLASDGLWERLSNDDAVNIVHR
WSHRQALQGPSPSFPHLIPTTSDPSSLPPSTPAAALVEALMVRVAAVHHM
GLRTLKCLPKGGQRRQIHDDVCVTVVQFDWRGGEGVQEG*

mRNA from alignment at chr8:1258739..1263733+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO08G04310.3 ID=NO08G04310.3|Name=NO08G04310.3|organism=Nannochloropsis oceanica|type=mRNA|length=4995bp|location=Sequence derived from alignment at chr8:1258739..1263733+ (Nannochloropsis oceanica)
ACGACAGAGGAAGGCTGGCGTTTGTGCGGCAAAGGAGTAGAGAGTGAGTG
AGTGAGAATGTCCGCCGGTATCAAGCGCAGTAATAGCGGCAATGCTGGCG
GTGGAGAGGGGGGAGGACGACGGGGTAAGCTTCAGCGTTTCCTGTCCCCA
GAATTTCCTATTCCTCCCAGCTTCCTCTCCTCACACCGCTCACCTTTCCC
TCCCACTCCTGCCTACACTCAAGGTACGCCCATCCCACCACCACCACCCT
CCTTTCTTGCGCCTCTCTTCGCGGACCCCATCAAGTTTTTGCAGCTTTTG
GAGGATCTGCTGGGGCTGATCGGAGAAAGGGAAGGAGGGCGCGGGGGAGG
GAGGGCAGAGAGAGGGAAAGGCGAGAAAGCTACCGCAGCATCAGCAGCAG
CACCAGCAGCAGCAGCTTCTGGTATCGTATTGTCACAAGGAGGTGAATTG
GAAGGAATTAAAGAAGGTAGGGGGGAAAGATTTGCATACCTGGTCGGTGT
TGAAGAGGTCAACGCGGTGTCGGTCTCCGAAGGGACCGAGCGGTTGGGGC
AAGCCCTCGCTCAGCGTCTGGGCGCCTCCTTTTTCTTCCTCCAGCTCCAT
CACCCTTCGTCGTCCTCCTCATCATCACTGGCTCTCCCTCCTCTCGTCCT
GGCCTCCACCCCTGCCTCGCCTCCGTCCGTCTTGCTGTGTGCTGCGTGGG
TGGGGGAAGGAAATGGGGCCCTGATTGCAGGGGCGGTGCAATTGCTGGAG
ACGAGGGGCTTTAGGTAACGAAGGAAGGATAGAGAGGAAAATGGACGGAG
GGAGGGAGGGAGGAAGGAACGGAGCCATACGTAGGCATATTTGGAGGGCG
CGTCCAGCACGCACTTATAAAGAGTGTTCGCTCATGCCATTCTTCCCCTT
CCTCCCCCCTCCCTCCCCCCCTCCCTCCCCCCCTCCTTCTTAATAGGGTG
GCCGGTCTGGCCACTCTGCGATTTGAGAGCACACCGGCGACAGAGGGCTT
GAAAGCTGCGTTCCCCATCTTTGCCATAAGCCGCGCGAAAGGTAGGAGGG
AGGGAGAGAGGGAGCGAAGGAGGAAGAAAGGGTTGATCAATCCTCACTTT
TTAATTTCAATAGGGGAAGGTCCTCGTCCACTCGCATTTGAAGCCAAAAA
TAGGTCCAACAACGGCAGTAACAGCAACTGCAGCAGCAGCAACTGCAGCA
GCAGCAGCAGCAGCAGTAGCAGCAGCAGTAGCAGTAGAGTTAGGGGCAAT
GAAAACGGATGTGGAAAATGCCTGTCTTCCTCCTTCGGCTCCTCCTCTAC
ATCTTCCTCTTCCTCCCCTTCCTCATCCGCGTCTACTCCTACTCCCCCCA
TCCCTATCACCAGTGGGAGAGGAGGAGGAGGAAGAGGCAAGGGAGGAGGA
GGAGGAAACGAGGGAGAAGGGGGTGGAGGAGGATGCCACGGTCAGGGGAA
GGGAGACAGAACGCCCTCAACAGCAGCAGCAGCCATGCCTGCGATGACGA
GAACGATGCCTTCAGCTACCGCTATGAAATCTACGCCCACGCCTCTCCCT
CTTGTAGTGGAGGAAAAGAATGGCAGGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCAG
CAGGGAAGGAGAAGGACGGAAAAGCCGGTGGCCGCACGCCTCCGACGCAT
GAACGAAAAGTGGAGGAAGGCGAGGAGGAACATGAGGGAAGAGGCGAGGG
CGAGGGAGGAGGAGGAAGCAGTAGCAAAAAGACGCGTCTGAGCCCCCCAG
CGCAGGAGCAGCAACAGCAGCGGCAACCGCAACAGCCACAACAGCAGCAG
AGGCAACGACAACGGCCGTCTACAGAGACTGACATATCCTCTTTCCCTCC
TTTCCTCGTCCCGGCAGCAGCCCCGGGCCCAGGAGCTCTCTCGGAGCCGA
ACGCCTCCCTCCATCCCTCCCCCCCTCCTTCCCTTCCTTGTTTGGTCCTC
AACCATTCCACCGCCTTCGTGGAAAGCAACGACCCGGGCGAAGACCGTTA
CACCAACCACCCGCCCGGCCTCCCACCTGCCATTCCTCTCCTCGACCCGA
CAGCCACAGTCAAAAAGGAAGGGGGAGGGAAGTCAGACAGGCCCTTCTCT
TCCTCCTCCACCAAAGACACAGGGCTCTCCTCCCAGCCCTCTCCCTCCTC
ACGCCTGACCCGACAGGCTCGAGGAAAAGGAGGAAGGGAGGGGAGGGAGG
GAGGGAGGGAGGGAGGGAGGGAGGACGTGGGCATCTACATTATCCTAGAT
GGGCATGGCGGGGGCCGGGCTAGCGAGTACATGTCGCAAGTAAGGCAGGG
GGGAGGGGGGAGGGAGGGAAGGAGGGCATGTGCTCACACTATTTTCTCAA
ACATTTTTAGCACTTGGTTCCCGCCGTCCTTGCCCGGCTTCCTCCCTCTT
CCACCTTTTCCTCCCTCCCCTCCTCCTCCTCTTCTTCTTCATCCTCCTCC
TTTACCACTACCCTCACCCCACCTCCGCCTGAGGAGATGGAAATAAAAGT
GAAGACAGCGCTGAGAGAGGCGTTCCTTGCTGTAGATAACGACTTTCTCT
CATCGCTAGCTGAGGGAGTGACGCTCGTAAGAAGGGGAGGGAGGGAGGGC
GGGAGGAAAGAAGGGAAAAAGGGAGGGAAAGGACCTGTGTTTTTGCCGAA
TCTTGAGCCGAGACTGTGCGTGGCAAAGTTGAACTCACCCTTTCCTTCTT
CCCTCCCTCTCACCCCCCTTCCTCCCCTTCCCCGCCCCTTCTTCTCCCTG
CCTAGGAGCAAGCCAAGGGGTTTTGGAATGCGGGCACGTGCGTGGTCCTT
GCCCTTATAATGGGAAATGTGCTCTATGTGGCGCACGTTGGAGACTGCCG
GGCCGTGCTGGCACAGAGGTGAGGGCAAGGAAAAAGCGAGGGAGGGAGGA
AGGAATTGGAAAAGGGGAAAGGAGATGGATGAGACAGAAGAAAGAGGCAA
AGCAAGCGTTGTCAAAGGCAGGAATTTATATACCTATACCTCACTCTCCT
CCTCCCCTGCTCCCCCTCCTCCCCCTCCTCCCCTACCTTTTCCTCCTCCT
GTTGCTCCTCCTCCCCTTCCCTCGTCGTAAAAAACACACAAGAGCGAGCC
CTCTCCCTTCTCGGGCGCCTTCCCGGGAGGTCAGCATGGCGGCCGTGGCT
GCTGTTGCAGCTGTTACCGCTGACGTTGTCGGGCTGGCGGTCGGACGAAG
GGGAGAAGAAGCAGCGGGAGCAGCAGCAGGAGCGGTGGGAGGGAGGGCAG
GCTCCCCGGTTCCACTTATTTGCCCTTCCTCGTCACCGTGCTCCCCTTCC
TCCTCTTTGTGCTCGTCGCCAAAGGTAGGATTGTGTGGGCGCGGGGAAGG
AGGGAAGAAGGGTGAAGGAGGAGGAGAAGGAAGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAAAGCTAGCCGCCGCCGCTGCTGCAGCTGCTGCTGCTGCTGCTGCCG
CCGCCGCTGTGGTCTCAAGTTATAAGCACTCACCGTTCCCTCCTATACTC
CCCCCTCCCATTCCCCCTTTCTCCTTTTCTCAAAGCCAAAAGCCTCCCCC
GCCTCACCCTTATCATTTCCCGCCAGCACCTCCTCCTCCTTCCCCCTCCC
CCCTCTTGGGCGCTCCTCTCCTCGCCGCACCTGTGCATTAGACCGGCTCC
TCCCTCCCCCCCCGCCCATCAAGGCTCTCGCCCTCACGGATGACCACACG
TGCCAGAACGCGAGCGAGGTACGTCCTTCTCAGGTGTCTGCCACTGCCTT
TCTACCCCCGAATGTTACCTCTCTCCCTCTCTCCCTCCCTCCCTCTCTCC
CTCCCTCCCTCTCTCCCTCCCTCCCACATTCCCTCCTCAGGTGAAGCTCG
TGAAGCAACGCACCACCGACAAGCACCCTATCCGCAAGAGCGCTAAAGAC
ACTCGCAACGCTCAGACGGTGTCAGGCCCAGGAGGGATCGATCGCGTCGC
AGGTAAAGCATCCATCCTCCCTCCCGCCTTCCCTCCCTCCCTCCCTTCCT
CTAGAGTGACACCTTCTGAAACCCTTCACAGTTCAAGACATCGATCCAAG
TTTTTCACCTTATCCCCTTTCCCCCCCCTGAAGGCTCCCTGGCCGTGACT
CGTGCCTTAGGAAATGGATACCTCAAGTGGCCCTCCCTCTCCTTCCCGCC
GTACCAGTACGTATTACCATGACGAAGGGAGGGAAAGAGAGGAGAAGAGG
GTTGATTGCCTGGCATCTGAGACGTCACCACTTGCATACACTGACCACCA
CTTCCCTCCTCCCTGTCTCCCTTCCCCCTTCCTTCTTCCCCCCCCTCTTC
CCTTAGGCCCTACCTGCCTTACATCACCGGTGAGCCCGTCATCTCCTCTC
ACGTCCTCTCCCCCTCTGCCGATCTCTTTCTCGTCCTCGCCTCGGATGGC
CTGTGGGAGCGTCTTTCCAACGATGACGCCGTCAATATCGTGCACAGATG
GTCGCACCGGCAAGCCCTGCAAGGCCCCTCTCCCTCCTTTCCTCACTTGA
TTCCGACCACATCTGACCCCTCCTCCCTTCCGCCCTCCACCCCGGCGGCC
GCACTGGTGGAGGCCCTGATGGTGCGCGTTGCGGCGGTGCATCACATGGG
CCTGAGGACGCTGAAGTGCCTGCCCAAGGGAGGGCAGCGGCGGCAGATCC
ACGACGATGTGTGTGTGACAGTGGTGCAGTTTGACTGGCGGGGGGGAGAG
GGGGTGCAAGAGGGCTAGAAAAGGATGCAATATGTATCGTGTGTCATAAA
AATACGACTGTGGCTGTGTGAAAAAGCGAACCATGACACGAAACACACGA
TATGGGAAAAAAATCCACTCATTGATGTCAAACAGACTGTGCTAA

Coding sequence (CDS) from alignment at chr8:1258739..1263733+

>NO08G04310.3 ID=NO08G04310.3|Name=NO08G04310.3|organism=Nannochloropsis oceanica|type=CDS|length=3270bp|location=Sequence derived from alignment at chr8:1258739..1263733+ (Nannochloropsis oceanica)
ATGTCCGCCGGTATCAAGCGCAGTAATAGCGGCAATGCTGGCGGTGGAGA
GGGGGGAGGACGACGGGGTACGCCCATCCCACCACCACCACCCTCCTTTC
TTGCGCCTCTCTTCGCGGACCCCATCAAGTTTTTGCAGCTTTTGGAGGAT
CTGCTGGGGCTGATCGGAGAAAGGGAAGGAGGGCGCGGGGGAGGGAGGGC
AGAGAGAGGGAAAGGCGAGAAAGCTACCGCAGCATCAGCAGCAGCACCAG
CAGCAGCAGCTTCTGGTATCGTATTGTCACAAGGAGGTGAATTGGAAGGA
ATTAAAGAAGGTAGGGGGGAAAGATTTGCATACCTGGTCGGTGTTGAAGA
GGTCAACGCGGTGTCGGTCTCCGAAGGGACCGAGCGGTTGGGGCAAGCCC
TCGCTCAGCGTCTGGGCGCCTCCTTTTTCTTCCTCCAGCTCCATCACCCT
TCGTCGTCCTCCTCATCATCACTGGCTCTCCCTCCTCTCGTCCTGGCCTC
CACCCCTGCCTCGCCTCCGTCCGTCTTGCTGTGTGCTGCGTGGGTGGGGG
AAGGAAATGGGGCCCTGATTGCAGGGGCGGTGCAATTGCTGGAGACGAGG
GGCTTTAGGGTGGCCGGTCTGGCCACTCTGCGATTTGAGAGCACACCGGC
GACAGAGGGCTTGAAAGCTGCGTTCCCCATCTTTGCCATAAGCCGCGCGA
AAGGGGAAGGTCCTCGTCCACTCGCATTTGAAGCCAAAAATAGGTCCAAC
AACGGCAGTAACAGCAACTGCAGCAGCAGCAACTGCAGCAGCAGCAGCAG
CAGCAGTAGCAGCAGCAGTAGCAGTAGAGTTAGGGGCAATGAAAACGGAT
GTGGAAAATGCCTGTCTTCCTCCTTCGGCTCCTCCTCTACATCTTCCTCT
TCCTCCCCTTCCTCATCCGCGTCTACTCCTACTCCCCCCATCCCTATCAC
CAGTGGGAGAGGAGGAGGAGGAAGAGGCAAGGGAGGAGGAGGAGGAAACG
AGGGAGAAGGGGGTGGAGGAGGATGCCACGGTCAGGGGAAGGGAGACAGA
ACGCCCTCAACAGCAGCAGCAGCCATGCCTGCGATGACGAGAACGATGCC
TTCAGCTACCGCTATGAAATCTACGCCCACGCCTCTCCCTCTTGTAGTGG
AGGAAAAGAATGGCAGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCAGCAGGGAAGGA
GAAGGACGGAAAAGCCGGTGGCCGCACGCCTCCGACGCATGAACGAAAAG
TGGAGGAAGGCGAGGAGGAACATGAGGGAAGAGGCGAGGGCGAGGGAGGA
GGAGGAAGCAGTAGCAAAAAGACGCGTCTGAGCCCCCCAGCGCAGGAGCA
GCAACAGCAGCGGCAACCGCAACAGCCACAACAGCAGCAGAGGCAACGAC
AACGGCCGTCTACAGAGACTGACATATCCTCTTTCCCTCCTTTCCTCGTC
CCGGCAGCAGCCCCGGGCCCAGGAGCTCTCTCGGAGCCGAACGCCTCCCT
CCATCCCTCCCCCCCTCCTTCCCTTCCTTGTTTGGTCCTCAACCATTCCA
CCGCCTTCGTGGAAAGCAACGACCCGGGCGAAGACCGTTACACCAACCAC
CCGCCCGGCCTCCCACCTGCCATTCCTCTCCTCGACCCGACAGCCACAGT
CAAAAAGGAAGGGGGAGGGAAGTCAGACAGGCCCTTCTCTTCCTCCTCCA
CCAAAGACACAGGGCTCTCCTCCCAGCCCTCTCCCTCCTCACGCCTGACC
CGACAGGCTCGAGGAAAAGGAGGAAGGGAGGGGAGGGAGGGAGGGAGGGA
GGGAGGGAGGGAGGACGTGGGCATCTACATTATCCTAGATGGGCATGGCG
GGGGCCGGGCTAGCGAGTACATGTCGCAACACTTGGTTCCCGCCGTCCTT
GCCCGGCTTCCTCCCTCTTCCACCTTTTCCTCCCTCCCCTCCTCCTCCTC
TTCTTCTTCATCCTCCTCCTTTACCACTACCCTCACCCCACCTCCGCCTG
AGGAGATGGAAATAAAAGTGAAGACAGCGCTGAGAGAGGCGTTCCTTGCT
GTAGATAACGACTTTCTCTCATCGCTAGCTGAGGGAGTGACGCTCGAGCA
AGCCAAGGGGTTTTGGAATGCGGGCACGTGCGTGGTCCTTGCCCTTATAA
TGGGAAATGTGCTCTATGTGGCGCACGTTGGAGACTGCCGGGCCGTGCTG
GCACAGAGAGCGAGCCCTCTCCCTTCTCGGGCGCCTTCCCGGGAGGTCAG
CATGGCGGCCGTGGCTGCTGTTGCAGCTGTTACCGCTGACGTTGTCGGGC
TGGCGGTCGGACGAAGGGGAGAAGAAGCAGCGGGAGCAGCAGCAGGAGCG
GTGGGAGGGAGGGCAGGCTCCCCGGTTCCACTTATTTGCCCTTCCTCGTC
ACCGTGCTCCCCTTCCTCCTCTTTGTGCTCGTCGCCAAAGCCAAAAGCCT
CCCCCGCCTCACCCTTATCATTTCCCGCCAGCACCTCCTCCTCCTTCCCC
CTCCCCCCTCTTGGGCGCTCCTCTCCTCGCCGCACCTGTGCATTAGACCG
GCTCCTCCCTCCCCCCCCGCCCATCAAGGCTCTCGCCCTCACGGATGACC
ACACGTGCCAGAACGCGAGCGAGGTGAAGCTCGTGAAGCAACGCACCACC
GACAAGCACCCTATCCGCAAGAGCGCTAAAGACACTCGCAACGCTCAGAC
GGTGTCAGGCCCAGGAGGGATCGATCGCGTCGCAGGCTCCCTGGCCGTGA
CTCGTGCCTTAGGAAATGGATACCTCAAGTGGCCCTCCCTCTCCTTCCCG
CCGTACCAGCCCTACCTGCCTTACATCACCGGTGAGCCCGTCATCTCCTC
TCACGTCCTCTCCCCCTCTGCCGATCTCTTTCTCGTCCTCGCCTCGGATG
GCCTGTGGGAGCGTCTTTCCAACGATGACGCCGTCAATATCGTGCACAGA
TGGTCGCACCGGCAAGCCCTGCAAGGCCCCTCTCCCTCCTTTCCTCACTT
GATTCCGACCACATCTGACCCCTCCTCCCTTCCGCCCTCCACCCCGGCGG
CCGCACTGGTGGAGGCCCTGATGGTGCGCGTTGCGGCGGTGCATCACATG
GGCCTGAGGACGCTGAAGTGCCTGCCCAAGGGAGGGCAGCGGCGGCAGAT
CCACGACGATGTGTGTGTGACAGTGGTGCAGTTTGACTGGCGGGGGGGAG
AGGGGGTGCAAGAGGGCTAG

Synonyms

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