NO08G03520, NO08G03520 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G03520 vs. NCBI_GenBank
Match: EWM26798.1 (Aminoacyl-tRNA synthetase, class I, conserved site [Nannochloropsis gaditana]) HSP 1 Score: 902.9 bits (2332), Expect = 5.200e-259 Identity = 452/540 (83.70%), Postives = 486/540 (90.00%), Query Frame = 0 Query: 52 KQRLLQQHQASTN----FARRMTTCMAAVRVRFAPSPTGTLHVGGARTALYNYLVARQSKDGAFVLRIEDTDTARSTRESEESMLADLRFLGLDWDEGPDKPGAVGPYRQSERIDIYKKIAQQLLDSGDAYPCFCSEEELEEKRKAAEAAGKPPQYDRTWRDADPVEVKKRMDAGEPYTVRFKVAPGRRVEIDDAVRGTVGWDADATVGDFILLRSSGMPVYNFCVAVDDALMGITTVIRAEEHLTNTLRQCLILEALKYPPPKYAHCSLILGEDRSKLSKRHGATSVDQFKAEGFLPDAMLNYLALLGWNDGTEQEVFDRSELIKKFSLNRVVKSPSVFDMAKLRWINGQHLRALSDEELVPLVEAQLISAGVAKEGAGEDGKTFVVHATQVAKGSMELVNDATTIVGDVLTYPLASTLEAGEAETLVAEGLWDMAREVVRAYEANEMPTGGEEDFQVLWKAWIKAVGKKMGKKGKQLFHPIRLALTGRMSGPDVGEQVKLLHLADKAAVNMVGLPARIGELKEVLSKHPAE-KEPVAG 587 KQ L Q Q ++ FARRM+T MAAVRVRFAPSPTGTLHVGGARTALYNYLVARQ KDG FVLRIEDTDTARSTRESEESMLADLRFLGLDWDEGPDKPGAVGPYRQSERID+YKK+AQQLL+SGDAYPCFC+EEELE KR+AAEAAGKPPQYDRTWRDADP VK++++AGEPYTVRFKVAPGRRVEIDDAVRGTVGWDADATVGDFILLRSSGMPVYNFCVAVDDALMGITTVIRAEEHLTNTLRQCLILEALKYP PKYAHCSLILGEDRSKLSKRHGATSVDQF+A+GFLPDAMLNYLALLGWNDGTEQEVF R ELI +FSLNRVVKSPSVFDMAKLRW+NGQHLRAL DE LVPLV A L G+ K GA +G FV +ATQVAKGSMELVNDA TIVGDVLTYPL TL +GEA+ LVAEGLW+MAREVV A+EANEMP G EEDF LWKAW+KAVGKKMG+KGKQLFHPIRLALTGRMSGPDVGEQ+++LHLA+ A ++V LP RI +L+E+L K P E KEPVAG Sbjct: 55 KQPLQQIDQPKSSPDALFARRMSTLMAAVRVRFAPSPTGTLHVGGARTALYNYLVARQHKDGVFVLRIEDTDTARSTRESEESMLADLRFLGLDWDEGPDKPGAVGPYRQSERIDVYKKVAQQLLESGDAYPCFCTEEELEAKRQAAEAAGKPPQYDRTWRDADPALVKEKIEAGEPYTVRFKVAPGRRVEIDDAVRGTVGWDADATVGDFILLRSSGMPVYNFCVAVDDALMGITTVIRAEEHLTNTLRQCLILEALKYPAPKYAHCSLILGEDRSKLSKRHGATSVDQFRAQGFLPDAMLNYLALLGWNDGTEQEVFSRQELIDRFSLNRVVKSPSVFDMAKLRWVNGQHLRALPDENLVPLVGACLEEEGMVKVGA--EGAAFVSYATQVAKGSMELVNDAATIVGDVLTYPLEETLASGEADALVAEGLWEMAREVVSAFEANEMPRGKEEDFAALWKAWVKAVGKKMGRKGKQLFHPIRLALTGRMSGPDVGEQIRMLHLAETGATSVVDLPTRIEKLREILRKAPVEAKEPVAG 592
BLAST of NO08G03520 vs. NCBI_GenBank
Match: CBJ28170.1 (Glutamyl-tRNA Synthetase, chloroplast precursor [Ectocarpus siliculosus]) HSP 1 Score: 649.0 bits (1673), Expect = 1.400e-182 Identity = 324/502 (64.54%), Postives = 392/502 (78.09%), Query Frame = 0 Query: 74 AAVRVRFAPSPTGTLHVGGARTALYNYLVARQSKDGAFVLRIEDTDTARSTRESEESMLADLRFLGLDWDEGPDKPGAVGPYRQSERIDIYKKIAQQLLDSGDAYPCFCSEEELEEKRKAAEAAGKPPQYDRTWRDADPVEVKKRMDAGEPYTVRFKVAPGRRVEIDDAVRGTVGWDADATVGDFILLRSSGMPVYNFCVAVDDALMGITTVIRAEEHLTNTLRQCLILEALKYPPPKYAHCSLILGEDRSKLSKRHGATSVDQFKAEGFLPDAMLNYLALLGWNDGTEQEVFDRSELIKKFSLNRVVKSPSVFDMAKLRWINGQHLRALSDEELVPLVEAQLISAGVAKEGAGEDGKTFVVHATQVAKGSMELVNDATTIVGDVLTYPLASTLEAGEAETLVAEGLWDMAREVVRAYEANEMPTGGEEDFQVLWKAWIKAVGKKMGKKGKQLFHPIRLALTGRMSGPDVGEQVKLLHLADKAAVNMVGLPARIGELKEVLS 576 A VRVRFAPSPTGTLHVGGARTAL+N+L A+ + G F+LRIEDTD ARS+RESEESMLADLR+LGL+WDEGPDK G VGPYRQSER +IYK++A +L+++G AYPCFC+EEEL KR+ AE + PQYD TWRDADP EVK +M+ G PYT RFKV G+R+ I D VRG V WDA+ATVGDFILLRS+G+PVYNFCVAVDDA MGIT V+RAEEHLTN+LRQCLIL+AL++P P+YAHCSLILGEDRSKLSKRHGATSV QF+ +GFLP AM NYL+LLGWNDGTE+E+F EL + F L RVVKS +VFDM KL+W+NGQHLRAL+ EELVP+V + L+ AGV K+ G FV+ A + +GS+ELV DA + D+L Y T+ + E+ LV +G ++ +V ++A EMP G EDF +K WIKA GK + +KGK+LFHPIRLALTG MSGPD+GEQ+KLL LA + V V L ARI LK L+ Sbjct: 71 ADVRVRFAPSPTGTLHVGGARTALFNFLQAKNA-GGKFILRIEDTDEARSSRESEESMLADLRWLGLEWDEGPDKGGEVGPYRQSERGEIYKEMADKLVEAGWAYPCFCTEEELIAKREQAENKNEAPQYDGTWRDADPAEVKAKMEEGVPYTYRFKVPKGKRIVIQDLVRGQVAWDAEATVGDFILLRSTGVPVYNFCVAVDDAQMGITHVVRAEEHLTNSLRQCLILDALEFPRPQYAHCSLILGEDRSKLSKRHGATSVGQFRQQGFLPSAMKNYLSLLGWNDGTEKEIFTEEELHEAFDLRRVVKSSAVFDMTKLKWMNGQHLRALAVEELVPMVGSTLVEAGVCKDAGG----PFVMSAATLVQGSLELVTDAISQTQDMLGYKFDETISSEESTELVGDGFSEVVAAIVADFDAGEMPKPGAEDFSPAFKKWIKAKGKALTRKGKRLFHPIRLALTGSMSGPDIGEQLKLLELASEEGVENVSLAARIETLKAWLA 567
BLAST of NO08G03520 vs. NCBI_GenBank
Match: XP_005718553.1 (Glutamyl-tRNA Synthetase, chloroplast [Chondrus crispus] >CDF38648.1 Glutamyl-tRNA Synthetase, chloroplast [Chondrus crispus]) HSP 1 Score: 614.0 bits (1582), Expect = 4.800e-172 Identity = 315/535 (58.88%), Postives = 397/535 (74.21%), Query Frame = 0 Query: 45 AITRPFLKQRLLQQHQASTNFARRMTTCMAAVRVRFAPSPTGTLHVGGARTALYNYLVARQSKDGAFVLRIEDTDTARSTRESEESMLADLRFLGLDWDEGPDKPGAVGPYRQSERIDIYKKIAQQLLDSGDAYPCFCSEEELEEKRKAAEAAGKPPQYDRTWRDADPVEVKKRMDAGEPYTVRFKVAPGRRVEIDDAVRGTVGWDADATVGDFILLRSSGMPVYNFCVAVDDALMGITTVIRAEEHLTNTLRQCLILEALKYPPPKYAHCSLILGEDRSKLSKRHGATSVDQFKAEGFLPDAMLNYLALLGWNDGTEQEVFDRSELIKKFSLNRVVKSPSVFDMAKLRWINGQHLRALSDEELVPLVEAQLISAGVAKEGAGEDGKTFVVHATQVAKGSMELVNDATTIVGDVLTYPLASTLEAGEAETLVAE--GLWDMAREVVRAYEANEMPTGGE-EDFQVLWKAWIKAVGKKMGKKGKQLFHPIRLALTGRMSGPDVGEQVKLLHLADK--AAVNMVGLPARIGELKEVL 575 +++RP L + + + + + VRVRFAPSPTG LHVGGARTALYN+L+ARQ+K GAF++R+EDTD RSTRESE+ +L DL +LGL WDEGP G GPYRQSER IY ++A +L+ G AYPCFC+EEEL+ KR+ AE G+PPQYD TWRDADP EVKKR+D GE YTVRFKV G RV IDDAVRG V WDAD+TVGDFI+LRS+G+PVYNFCVAVDDALMG++TV+RAEEHLTNTLRQ LIL AL + P+YAHCSLILG DRSKLSKRHGATSV F+ EG+LP AM+NYLA+LGWNDGTE+E++ ELI+ F ++R+ KSP++FD KLR+INGQHLRAL +EL LV A+ +GV + D A + +GS+ELVNDA + YPL TL +GEA+ L+ E G ++A +RAY+A E+P G + E+ + WK W+KAVGK+ G+KGK+LFHP+RLALTG+MSGPDVGE +++L+L +K AA + V L R+ L+ L Sbjct: 30 SLSRPVLWRSAALRSRRFATPSATVAPATKQVRVRFAPSPTGALHVGGARTALYNWLLARQTK-GAFLVRVEDTDVVRSTRESEDMVLEDLTWLGLHWDEGPRVGGDRGPYRQSERSTIYVELADKLVREGKAYPCFCTEEELDRKREEAEREGRPPQYDGTWRDADPEEVKKRIDNGEQYTVRFKVPSGSRVIIDDAVRGKVAWDADSTVGDFIILRSTGVPVYNFCVAVDDALMGVSTVLRAEEHLTNTLRQVLILRALDFETPEYAHCSLILGSDRSKLSKRHGATSVTLFREEGYLPVAMINYLAMLGWNDGTEKEIYTVEELIEVFDIHRITKSPAMFDGDKLRYINGQHLRALPSKELEDLVLAEWKLSGVFNDTLEAD-SPLAQAAVALVRGSLELVNDANEEMQKAFAYPLDETLASGEADELIGEDGGFNEVASAALRAYDAGELPIGDDGEEHKGKWKKWVKAVGKEYGRKGKRLFHPLRLALTGKMSGPDVGEILQILYLTEKGEAATSFVPLAERMEALRNKL 562
BLAST of NO08G03520 vs. NCBI_GenBank
Match: CEM22119.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 590.5 bits (1521), Expect = 5.700e-165 Identity = 297/504 (58.93%), Postives = 374/504 (74.21%), Query Frame = 0 Query: 76 VRVRFAPSPTGTLHVGGARTALYNYLVARQSKDGAFVLRIEDTDTARSTRESEESMLADLRFLGLDWDEGPDKPGAVGPYRQSERIDIYKKIAQQLLDSGDAYPCFCSEEELEEKRKAAEAAGKPPQYDRTWRDADPVEVKKRMDAGEPYTVRFKVAPGRRVEIDDAVRGTVGWDADATVGDFILLRSSGMPVYNFCVAVDDALMGITTVIRAEEHLTNTLRQCLILEALKYPPPKYAHCSLILGEDRSKLSKRHGATSVDQFKAEGFLPDAMLNYLALLGWND--GTEQEVFDRSELIKKFSLNRVVKSPSVFDMAKLRWINGQHLRALSDEELVPLVEAQLISAGVAKEGAGEDGKTFVVHATQVAKGSMELVNDATTIVGDVLTYPLASTLEAGEAETLVAEGLWDMAREVVRAYEANEMPTGGEED---FQVLWKAWIKAVGKKMGKKGKQLFHPIRLALTGRMSGPDVGEQVKLLHLADKAAVNMVGLPARIGELKEVL 575 VRVRFAPSPTG+LHVGGARTALYNYL+A+Q+K G FV+R+EDTDTARSTRESE ++ DLR+LGL+ +EGP GPYRQSER IYK +A +L+ +G AYPCFC+++ELE R+ AE G+PP YD TWRDADP E+ K + G PYT+RF+V G+RV ++D VRG V WDA + VGDFI+LRSSGMPVYNFCVAVDDALM IT VIRAEEHL+NTLRQ LIL+ L YP P+YAHCSLILG DRSKLSKRHGATSV QF+ +G+LP A+ NYLALLGWN+ GTE+E++ EL+ FSL+RV S +VFD+ KL W+N QHL+A ++ + QL AG+ G E F A + + ++L ++A +V +L +PL T+ +GEA L+ +G D+AR VV A+++ +PTG D F+ WK W+K VGK +G+KGK+LFHPIRLALTGRMSGPDVG+QV+LL LA K V V L RIG+L+E L Sbjct: 124 VRVRFAPSPTGSLHVGGARTALYNYLLAKQTK-GKFVIRVEDTDTARSTRESENGIMEDLRWLGLEANEGPGTESKYGPYRQSERTHIYKDMADRLVQAGLAYPCFCTDQELEAMRQRAEEEGRPPHYDGTWRDADPDEIAKMKEQGVPYTIRFRVPSGKRVTVNDHVRGEVSWDAGSAVGDFIILRSSGMPVYNFCVAVDDALMEITHVIRAEEHLSNTLRQLLILDGLGYPAPEYAHCSLILGTDRSKLSKRHGATSVGQFREQGYLPQALNNYLALLGWNEGTGTEKEIYTMDELVSSFSLDRVGSSGAVFDLQKLNWVNSQHLKAQDPALILEQLGRQLDKAGI---GGNEGTGGFRELAVDMVREPLQLAHEAPGLVSALLEHPLDDTISSGEASELLEDGFVDVARAVVEAHDSGALPTGDGRDGAEFESAWKGWVKNVGKSLGRKGKRLFHPIRLALTGRMSGPDVGQQVRLLSLAVKEGVPCVCLDDRIGKLREWL 623
BLAST of NO08G03520 vs. NCBI_GenBank
Match: EJK50060.1 (hypothetical protein THAOC_31011 [Thalassiosira oceanica]) HSP 1 Score: 587.8 bits (1514), Expect = 3.700e-164 Identity = 313/549 (57.01%), Postives = 386/549 (70.31%), Query Frame = 0 Query: 77 RVRFAPSPTGTLHVGGARTALYNYLVARQSK------DGAFVLRIEDTDTARSTRESEESMLADLRFLGLDWDEGPDKPGA-VGPYRQSERIDIYKKIAQQLLDSGDAYPCFCSEEELEEKRKAAEAAGKPPQYDRTWRDADPVEVKKRMDAGEPYTVRFKVAPGRRVEIDDAVRGTVGWDADATVGDFILLRSSGMPVYNFCVAVDDALMGITTVIRAEEHLTNTLRQCLILEALKYPPPKYAHCSLILGEDRSKLSKRHGATSVDQFKAEGFLPDAMLNYLALLGWNDGTEQEVFDRSELIKKFSLNRVVKSPSVFDMAKLRWINGQHLRALSDEELVPLVEAQLISAGVAKEGAGEDGK-TFVVHATQVAKGSMELVNDATTIVGDVLTYPLASTL----EAGEAETLVAEG-LWDMAREVVRAYEANEMPT-------------------------GGEEDFQVLWKAWIKAVGKKMGKKGKQLFHPIRLALTGRMSGPDVGEQVKLLHLA--DKAAVN-----MVGLPARIGELKEVLSKHPAE 581 R+RFAPSPTG+LHVGGARTALYN+LVA++ + +G FVLR+EDTD ARST+ESE+S+LADL +LGL WDEGPD P A GPYRQSER +Y K+AQ L+D G AYPCFC+ EELEE + EA G PP+YD TWRDADP VK++M AG+PYTVRFKV G RV IDDAVRGTV WDA+ATVGDFILLRSSG+PVYNFCVAVDDA MGITTVIRAEEHLTNTLRQ LIL+AL P P+YAHCSLILGED+ KLSKRHGATS +QF+ +GFLPDAM+NYLALLGWNDGT+ E+F R ELI+ F ++R+VKSPSVFDM KL+W+N QHL+A+ EE+ LVE QL + KEGA + K FV T +AK ME + DA T VL Y L +T + GEA+ ++ G +++A V+ +++ PT G E + +KA +K++ K M KGK LFHP+RLALTG MSG DV +Q+ LL ++ D +A+N +V R+ L++ P E Sbjct: 125 RMRFAPSPTGSLHVGGARTALYNWLVAKKGQLDHPNTEGGFVLRVEDTDLARSTKESEDSVLADLSWLGLTWDEGPDMPLAKYGPYRQSERSSLYSKLAQTLIDEGKAYPCFCTAEELEEMKVRMEAEGIPPRYDGTWRDADPALVKEKMAAGDPYTVRFKVPDGVRVVIDDAVRGTVSWDAEATVGDFILLRSSGVPVYNFCVAVDDASMGITTVIRAEEHLTNTLRQGLILDALGAPRPRYAHCSLILGEDKQKLSKRHGATSCNQFRLDGFLPDAMVNYLALLGWNDGTDNEIFTRDELIEAFDVDRIVKSPSVFDMDKLKWVNSQHLKAMEVEEIQDLVEEQLNFLDMIKEGADDSAKRDFVFATTTLAKQMMETLQDAATNARTVLGYNLPATFGDLEDGGEAKEMIELGNFYNIATRVLEMHDSKSFPTPAADNLLTAFVDGSNKAIVEDNDVGGDETSYPQEYKATMKSMAKDMKVKGKNLFHPVRLALTGEMSGQDVTKQLSLLAMSETDNSAINADSAGVVSFETRMERLRKFCESIPEE 673
BLAST of NO08G03520 vs. NCBI_GenBank
Match: XP_002295319.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED87385.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 584.3 bits (1505), Expect = 4.100e-163 Identity = 311/523 (59.46%), Postives = 383/523 (73.23%), Query Frame = 0 Query: 77 RVRFAPSPTGTLHVGGARTALYNYLVAR-------QSKDGAFVLRIEDTDTARSTRESEESMLADLRFLGLDWDEGPDKPGA-VGPYRQSERIDIYKKIAQQLLDSGDAYPCFCSEEELEEKRKAAEAAGKPPQYDRTWRDADPVEVKKRMDAGEPYTVRFKVAPGRRVEIDDAVRGTVGWDADATVGDFILLRSSGMPVYNFCVAVDDALMGITTVIRAEEHLTNTLRQCLILEALKYPPPKYAHCSLILGEDRSKLSKRHGATSVDQFKAEGFLPDAMLNYLALLGWNDGTEQEVFDRSELIKKFSLNRVVKSPSVFDMAKLRWINGQHLRALSDEELVPLVEAQLISAGVAKEGAGEDGKT--FVVHATQVAKGSMELVNDATTIVGDVLTYPLAST---LEAGEAETLVAEG-LWDMAREVVRAYEANEMPTGGEEDFQVLWK-------AWIKAVGKKMGKKGKQLFHPIRLALTGRMSGPDVGEQVKLLHLA--DKAAVN-----MVGLPARIGELK 572 R+RFAPSPTG+LHVGGARTALYN+LVA+ + + G FVLR+EDTD ARST+ESE+S+LADL +LGL WDEGPD P A GPYRQSER +Y K+A +L+ G AYPCFC+ EEL+E + EA G PP+YD TWRDADP V K++ GEPYTVRFKV PG RV IDDAVRGTV WDA+ATVGDFILLRSSG+PVYNFCVAVDDA MGITTVIRAEEHLTNTLRQ LIL+AL P P+YAHCSLILGED+ KLSKRHGATS +QF+ +GFLPDAM+NYLALLGWNDGT+ E+F R ELI+ F ++R+VKSPSVFDM KL+W+N QHL+ + E+L+ LV+ QL + KEG G++ KT FV+ +T +AK ME DA T VL Y L +T L EA+T+V +G + +A +++ +EA P + + A +KA+ K+MG KGK LFHP+RLALTG MSG DV +Q+ LL +A D +AVN +V +R+ LK Sbjct: 1 RMRFAPSPTGSLHVGGARTALYNWLVAKKGLLDYGEERGGGFVLRVEDTDLARSTKESEDSVLADLSWLGLLWDEGPDTPLAKYGPYRQSERSALYSKVANRLIAQGKAYPCFCTTEELDEMKARMEAEGIPPRYDGTWRDADPEVVAKKIADGEPYTVRFKVPPGARVVIDDAVRGTVAWDAEATVGDFILLRSSGVPVYNFCVAVDDATMGITTVIRAEEHLTNTLRQGLILDALGAPRPRYAHCSLILGEDKQKLSKRHGATSCNQFRLDGFLPDAMINYLALLGWNDGTDNEIFTREELIEAFDIDRIVKSPSVFDMDKLKWVNSQHLKKMEVEDLLGLVQEQLEFMEMIKEG-GDEKKTRDFVLASTALAKQMMETTQDAATNAKTVLGYDLPATFDGLSDAEAKTMVEQGNFYGIAVKIIEMHEAGSFPMPDANNMLAAFMDGSNKAIATMKALAKEMGVKGKDLFHPVRLALTGEMSGQDVTKQMSLLAMASEDDSAVNVEKAGVVAFESRVEMLK 522
BLAST of NO08G03520 vs. NCBI_GenBank
Match: XP_005538846.1 (glutamate--tRNA ligase, chloroplast or mitochondrial [Cyanidioschyzon merolae strain 10D] >BAM82810.1 glutamate--tRNA ligase, chloroplast or mitochondrial [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 572.0 bits (1473), Expect = 2.100e-159 Identity = 300/557 (53.86%), Postives = 387/557 (69.48%), Query Frame = 0 Query: 76 VRVRFAPSPTGTLHVGGARTALYNYLVARQSKDGAFVLRIEDTDTARSTRESEESMLADLRFLGLDWDEG---PDKP------GAVGPYRQSERIDIYKKIAQQLLDSGDAYPCFCSEEELEEKRKAAEAAGKPPQYDRTWRDADPVEVKKRMDAGEPYTVRFKVAPGRRVEIDDAVRGTVGWDADATVGDFILLRSSGMPVYNFCVAVDDALMGITTVIRAEEHLTNTLRQCLILEALKYPPPKYAHCSLILGEDRSKLSKRHGATSVDQFKAEGFLPDAMLNYLALLGWNDGTEQEVFDRSELIKKFSLNRVVKSPSVFDMAKLRWINGQHLRALSDEELVPL-----VEAQLI---------------SAGVAKEGAGEDGKTFVVHATQVAKGSMELVNDATTIVGDVLTYPLASTLEAGEAETLVAE--GLWDMAREVVRAYEANEMPTG------------------GEEDFQVLWKAWIKAVGKKMGKKGKQLFHPIRLALTGRMSGPDVGEQVKLLHLADKAA-VNMVGLPARIGELKEVLSKHPAEKE 583 VRVRFAPSPTG LHVGGARTAL+N+L AR ++ G F++RIEDTD ARS+R SE ++L DLR+LGLDWDEG PD+P G GPYRQSER IY+ A +L++SG YPCFC+EE+LE KR+ AEA + PQYD T RDADP ++KR+ G+PYT+RF+V G RVEI D +RG + WDA+AT+GDFI++RSSG+PVYNFCVAVDDALMGITTVIRAEEHLTNTLRQ LIL+AL Y P+YAH SLILG DR KLSKRHGATS+DQ+ EGFLP+AM+NYLALLGWNDGTE+E++ ELIK FSL+R+ KS +VFD KLRW+NG HLR++ E+L + ++A +I +AGVA+ + F AT++ +GS+EL D ++ D+L YPL T+E+G+++ L+ G D+A V+ Y E+P G E+ F WKAW+K +G ++G+K K+LFHPIRL +TGRM+GPDVGE +++L LA V V L R+ L+ V+ K E+E Sbjct: 195 VRVRFAPSPTGNLHVGGARTALFNWLYAR-NQGGYFIIRIEDTDQARSSRASELAVLRDLRWLGLDWDEGPAYPDEPTTEPYRGERGPYRQSERSAIYEAAAAKLIESGAVYPCFCTEEQLERKRRLAEAEHRAPQYDGTCRDADPALIRKRLQRGDPYTLRFRVPAGTRVEIRDVIRGDIAWDANATIGDFIIVRSSGLPVYNFCVAVDDALMGITTVIRAEEHLTNTLRQALILDALGYDRPQYAHVSLILGADRQKLSKRHGATSIDQYAREGFLPEAMMNYLALLGWNDGTEREIYSVEELIKAFSLDRITKSAAVFDANKLRWMNGLHLRSMPPEKLCGVLIRFWLDANVIQRPAEEIDVDVPTRAAAGVAQSASALRFWVFTSRATELLRGSIELAKDCVPLLQDILEYPLEETIESGDSDELLTPQGGFLDIATAVLERYRKGEIPFGDEIEPDPEMMVPNAPSLTSEDPFIEDWKAWVKGIGTQLGRKSKRLFHPIRLVMTGRMTGPDVGEIMRILGLAKGVVQVPYVPLSERMRILERVVKKLRTERE 750
BLAST of NO08G03520 vs. NCBI_GenBank
Match: XP_002184854.1 (glutamyl-trna synthase, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC43590.1 glutamyl-trna synthase, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 557.0 bits (1434), Expect = 7.000e-155 Identity = 289/503 (57.46%), Postives = 362/503 (71.97%), Query Frame = 0 Query: 77 RVRFAPSPTGTLHVGGARTALYNYLVARQSK------DGAFVLRIEDTDTARSTRESEESMLADLRFLGLDWDEGPDKPGAV---GPYRQSERIDIYKKIAQQLLDSGDAYPCFCSEEELEEKRKAAEAAGKPPQYDRTWRDADPVEVKKRMDAGEPYTVRFKVAPGRRVEIDDAVRGTVGWDADATVGDFILLRSSGMPVYNFCVAVDDALMGITTVIRAEEHLTNTLRQCLILEALKYPPPKYAHCSLILGEDRSKLSKRHGATSVDQFKAEGFLPDAMLNYLALLGWNDGTEQEVFDRSELIKKFSLNRVVKSPSVFDMAKLRWINGQHLRALSDEELVPLVEAQLISAGVAKEGAGEDGKT------FVVHATQVAKGSMELVNDATTIVGDVLTYPLAST---LEAGEAETLVAEG-LWDMAREVVRAYEANEMPTGGEE----DFQVLWKAWIKAVGKKMGKKGKQLFHPIRLALTGRMSGPDVGEQVKLLHLADKA 557 R+RFAPSPTG+LHVGGARTALYN+LVAR+ + + AFVLR+EDTD ARST+ESE S+LADL +LGL WDEGPD P GPYRQSER ++Y +AQ+L+D G AY CFC+ EEL+ + EA G+ P+YD WRDA +V++ +D G+ YTVRFKV RV IDD VRG V WDA ATVGDFILLRSSG+PVYNFCVAVDDA MGITTV+RAEEHLTNT+RQ L+L+AL P P+YAHCSLILGED+ KLSKRHGATS DQ++ +GFLPDAM+NYLALLGWNDGT+ E+F R ELI F L+RVVKSPSVFD+ KL+W+N QHL+ + E+LVPLV+ Q++ G+ K+G D F AT +AK ME DA VL Y L +T + EA T++A G + +A+++V Y + E P ++ F + A +K++ K++G KG+ LFHP+RLALTG MSG DV +Q+ LL LA KA Sbjct: 70 RMRFAPSPTGSLHVGGARTALYNWLVARKGQAEEPQSNAAFVLRVEDTDLARSTKESENSVLADLEWLGLLWDEGPDMPSETAPYGPYRQSERGEVYYAVAQKLMDDGKAYRCFCTPEELDAMKADQEARGETPRYDGRWRDASVDDVQQALDEGKAYTVRFKVTDNSRVVIDDVVRGMVSWDAQATVGDFILLRSSGVPVYNFCVAVDDACMGITTVVRAEEHLTNTVRQALVLDALGAPRPRYAHCSLILGEDKQKLSKRHGATSCDQYRLDGFLPDAMINYLALLGWNDGTDNEIFARDELIDAFELDRVVKSPSVFDLEKLKWVNAQHLKLRTVEDLVPLVKQQILWQGMFKDGLVSDDSVDLGVIDFTYAATALAKQMMETTKDAALNAKTVLGYGLPATFTDVRDEEARTMIATGNFYALAQKLVAQYRSGEFPQDTQKGPACQFTQDYMAHMKSLAKELGLKGRHLFHPVRLALTGEMSGQDVTKQMSLLALATKA 572
BLAST of NO08G03520 vs. NCBI_GenBank
Match: GAX20152.1 (glutamyl-tRNA synthetase [Fistulifera solaris]) HSP 1 Score: 551.6 bits (1420), Expect = 3.000e-153 Identity = 296/554 (53.43%), Postives = 372/554 (67.15%), Query Frame = 0 Query: 77 RVRFAPSPTGTLHVGGARTALYNYLVARQSK------DGAFVLRIEDTDTARSTRESEESMLADLRFLGLDWDEGPDKPGA-VGPYRQSERIDIYKKIAQQLLDSGDAYPCFCSEEELEEKRKAAEAAGKPPQYDRTWRDADPVEVKKRMDAGEPYTVRFKVAPGRRVEIDDAVRGTVGWDADATVGDFILLRSSGMPVYNFCVAVDDALMGITTVIRAEEHLTNTLRQCLILEALKYPPPKYAHCSLILGEDRSKLSKRHGATSVDQFKAEGFLPDAMLNYLALLGWNDGTEQEVFDRSELIKKFSLNRVVKSPSVFDMAKLRWINGQHLRALSDEELVPLVEAQLISAGVAKEGAGEDGK---TFVVHATQVAKGSMELVNDATTIVGDVLTYPLASTLE----AGEAETLVAEG-LWDMAREVVRAYE---------ANEMPTGGEEDFQVL-------------WKAWIKAVGKKMGKKGKQLFHPIRLALTGRMSGPDVGEQVKLLHLA-------DKAAVNMVGLPARIGELKEVLSKHPAEKEPVAG 587 R+RFAPSPTG+LHVGGARTALYN+LVA++ + + AFVLR+EDTD ARST+ESE S++ADL++LGL WDEGPD G GPYRQSER DIY AQ+LL G AY CFC+ EELEE + E+ G+ P+YD WRDADP VKK MD G PYTVRFKV R+ I+D +RGTV WDA+ATVGDFILLRSSG+PVYNFCVAVDDA MGITTV+RAEEHLTNT+RQ L L+AL P P+YAHCSLILGED+ KLSKRHGATS DQ++ +GFLPDAM+NYLALLGWNDGT+ E+F R ELI F LNRVVKSPSVFD+ KL+W+NGQHL+ +S ++ P V+ QL AG K A + + F T +AK M+ DA T VL Y L E EA+ ++ +G + +A++++ ++ AN + +ED Q + + +K + K++G KGK LFHP RLALTG MSG DV +Q+ LL LA D + +V R+ L++ P E + +G Sbjct: 109 RMRFAPSPTGSLHVGGARTALYNWLVAKKGQMDYPGSNAAFVLRVEDTDVARSTKESEASVIADLKWLGLIWDEGPDMEGTNYGPYRQSERSDIYFAAAQRLLQDGKAYRCFCTPEELEEMKAEQESRGETPRYDGRWRDADPALVKKMMDEGRPYTVRFKVPSNSRIVIEDVIRGTVAWDAEATVGDFILLRSSGVPVYNFCVAVDDAAMGITTVVRAEEHLTNTVRQALALDALNAPRPRYAHCSLILGEDKQKLSKRHGATSCDQYRLDGFLPDAMINYLALLGWNDGTDNEIFTREELIDAFDLNRVVKSPSVFDIEKLKWVNGQHLKMMSVADVCPYVQDQLQWAGFFKADANMESQPVSDFTFACTSLAKTMMDTTKDAATNAKAVLGYGLPLRFEDLADNSEAKEMIKKGNFYVIAQKLLSMHDEGLLVMPDPANLLSAFADEDAQKVDTANGHSCQYTADYMKQMKVLAKELGVKGKNLFHPARLALTGEMSGQDVTKQLSLLELAVQADDVIDMNGIGVVPFAERMERLRKFCESIPTEFQTPSG 662
BLAST of NO08G03520 vs. NCBI_GenBank
Match: GAX13173.1 (glutamyl-tRNA synthetase [Fistulifera solaris]) HSP 1 Score: 550.1 bits (1416), Expect = 8.600e-153 Identity = 298/554 (53.79%), Postives = 370/554 (66.79%), Query Frame = 0 Query: 77 RVRFAPSPTGTLHVGGARTALYNYLVARQSK------DGAFVLRIEDTDTARSTRESEESMLADLRFLGLDWDEGPDKPGA-VGPYRQSERIDIYKKIAQQLLDSGDAYPCFCSEEELEEKRKAAEAAGKPPQYDRTWRDADPVEVKKRMDAGEPYTVRFKVAPGRRVEIDDAVRGTVGWDADATVGDFILLRSSGMPVYNFCVAVDDALMGITTVIRAEEHLTNTLRQCLILEALKYPPPKYAHCSLILGEDRSKLSKRHGATSVDQFKAEGFLPDAMLNYLALLGWNDGTEQEVFDRSELIKKFSLNRVVKSPSVFDMAKLRWINGQHLRALSDEELVPLVEAQLISAGVAKEGAGEDGKT---FVVHATQVAKGSMELVNDATTIVGDVLTYPLASTLE--AGEAET----------LVAEGLWDMARE--VVRAYEANEMPTGGEEDFQVL-------------WKAWIKAVGKKMGKKGKQLFHPIRLALTGRMSGPDVGEQVKLLHLA-------DKAAVNMVGLPARIGELKEVLSKHPAEKEPVAG 587 R+RFAPSPTG+LHVGGARTALYN+LVA++ + + AFVLR+EDTD ARST+ESE S++ADL++LGL WDEGPD G GPYRQSER DIY AQ+LL G AY CFC+ EELEE + E+ G+ P+YD WRDADP VKK MD G PYTVRFKV R+ I+D +RGTV WDA+ATVGDFILLRSSG+PVYNFCVAVDDA MGITTV+RAEEHLTNT+RQ L L+AL P P+YAHCSLILGED+ KLSKRHGATS DQ++ +GFLPDAM+NYLALLGWNDGT+ E+F R ELI F LNRVVKSPSVFD+ KL+W+NGQHL+ +S ++ P V+ QL AG K A + ++ F T +AK M+ DA VL Y L E A ++E ++A+ L M E +V AN + +ED Q + + +K + K++G KGK LFHP RLALTG MSG DV +Q+ LL LA D ++ +V R+ L++ P E + +G Sbjct: 109 RMRFAPSPTGSLHVGGARTALYNWLVAKKGQMDYPGSNAAFVLRVEDTDVARSTKESEASVIADLKWLGLIWDEGPDMEGTNYGPYRQSERSDIYFAAAQRLLQDGKAYRCFCTPEELEEMKAEQESRGETPRYDGRWRDADPALVKKMMDEGRPYTVRFKVPSNSRIVIEDVIRGTVAWDAEATVGDFILLRSSGVPVYNFCVAVDDAAMGITTVVRAEEHLTNTVRQALALDALNAPRPRYAHCSLILGEDKQKLSKRHGATSCDQYRLDGFLPDAMINYLALLGWNDGTDNEIFTREELIDAFDLNRVVKSPSVFDIEKLKWVNGQHLKMMSVTDVCPYVQDQLQWAGFFKADANMESQSVSDFTFACTSLAKTMMDTTKDAAINAKTVLGYGLPPKFEDLADDSEAKEMIKRGNFYVIAQKLLSMQDEGLLVMPDPANLLSAFADEDAQKVDTANGHSCQYTADYMKQMKVLAKELGVKGKNLFHPARLALTGEMSGQDVTKQLSLLELAVQADDVIDLDSIGVVPFGERMERLRKFCESIPTEFQTPSG 662 The following BLAST results are available for this feature:
BLAST of NO08G03520 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G03520 ID=NO08G03520|Name=NO08G03520|organism=Nannochloropsis oceanica|type=gene|length=1761bpback to top protein sequence of NO08G03520.1 >NO08G03520.1-protein ID=NO08G03520.1-protein|Name=NO08G03520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=587bpback to top Synonyms
Publications
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