GTS, gene3713 (gene) Nannochloropsis gaditana

Overview
NameGTS
Unique Namegene3713
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:261372..263150 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100018g48
Gene biotypeprotein_coding
GeneGTS
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:261372..263150 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003824catalytic activity
GO:0000166nucleotide binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005737cytoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL141ngnoL141Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G03520NO08G03520Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3859rna3859-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3859rna3859Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3859

>rna3859-protein ID=rna3859-protein|Name=rna3859|organism=Nannochloropsis gaditana|type=polypeptide|length=592bp
MKVIAFMTLTVTGLISCCSGRALASITYAAGRRQNIAGFLGRARISTFRS
PTSTKQPLQQIDQPKSSPDALFARRMSTLMAAVRVRFAPSPTGTLHVGGA
RTALYNYLVARQHKDGVFVLRIEDTDTARSTRESEESMLADLRFLGLDWD
EGPDKPGAVGPYRQSERIDVYKKVAQQLLESGDAYPCFCTEEELEAKRQA
AEAAGKPPQYDRTWRDADPALVKEKIEAGEPYTVRFKVAPGRRVEIDDAV
RGTVGWDADATVGDFILLRSSGMPVYNFCVAVDDALMGITTVIRAEEHLT
NTLRQCLILEALKYPAPKYAHCSLILGEDRSKLSKRHGATSVDQFRAQGF
LPDAMLNYLALLGWNDGTEQEVFSRQELIDRFSLNRVVKSPSVFDMAKLR
WVNGQHLRALPDENLVPLVGACLEEEGMVKVGAEGAAFVSYATQVAKGSM
ELVNDAATIVGDVLTYPLEETLASGEADALVAEGLWEMAREVVSAFEANE
MPRGKEEDFAALWKAWVKAVGKKMGRKGKQLFHPIRLALTGRMSGPDVGE
QIRMLHLAETGATSVVDLPTRIEKLREILRKAPVEAKEPVAG
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Synonyms
Publications