NO08G01080, NO08G01080 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G01080 vs. NCBI_GenBank
Match: EWM26589.1 (magnesium and cobalt transport protein [Nannochloropsis gaditana]) HSP 1 Score: 473.0 bits (1216), Expect = 1.100e-129 Identity = 270/426 (63.38%), Postives = 287/426 (67.37%), Query Frame = 0 Query: 57 LRQQXXRNTGIIKSTAEAAXXLA----GARREEGREG-GKCNRKGKKPAGIGEGWSDFHFKVEWSKLCIFMAGRPSYDTIISLHSKWETFNNETDEMLWGEGGAARAPVG-RGRGEA-EGLRSR-------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGHIFENLVAALKVDYSVLRQGNSKHLLYRILDEAVDYLLPIARAYRTRVRLFQAHLHRNESKFTKEQMRLVLGMKSELQRLQRRIRPMKAVVRHLMDDEQIGHDMKVYLEDVLDHVVRGLEEIGGCIEMCDSTKEEFKSLRDQRTNEVLYTLTVVTTMFVPLQFLTGVYGMNFVNAEGHPTMPELLWPRGYLFFWCMAATLFSVSLYFFRTHLSY 463 LRQQ R + IIKSTAEAA LA G R G +G G+ + ++ G E WSDFHF+VEWSKLCIFMAG PSYDT+ISLH KWETFN+ETDEML GE G P G +G GE +G+ SR +GHIFE LV ALKVDYS LRQGNSKHLLYRILDE VD+L+PIA+AYRTRVRLFQA LHRNES F KE MRLVLGMKSELQRLQRRIRPM AVVRHLMDDEQIG DMKVYLEDVLDHVVRGLEEIGGCIEMCDSTKEEFKSLRDQRTNEVLYTLTVVTTMFVPLQFLTGVYGMNF+N EG PTMPELLWPRGYLFFWCMAATLFSVS YFFR HLSY Sbjct: 429 LRQQRRRYSSIIKSTAEAAALLAHGATGQRERGGLQGSGQASPNDRRHKG-KESWSDFHFRVEWSKLCIFMAGAPSYDTLISLHGKWETFNSETDEMLRGEEG----PGGKKGAGEEWKGMGSRTESSASMAKGGNSSFVGGSASTHGLRFRRGGGREAGDLDSGEDGLIKDDSMAASHYEHHVRYGWDGQESGSTSPYSGVGGANSSFSQGHIFERLVTALKVDYSTLRQGNSKHLLYRILDEVVDFLIPIAQAYRTRVRLFQAQLHRNESTFKKEHMRLVLGMKSELQRLQRRIRPMTAVVRHLMDDEQIGQDMKVYLEDVLDHVVRGLEEIGGCIEMCDSTKEEFKSLRDQRTNEVLYTLTVVTTMFVPLQFLTGVYGMNFMNKEGEPTMPELLWPRGYLFFWCMAATLFSVSWYFFRRHLSY 849
BLAST of NO08G01080 vs. NCBI_GenBank
Match: OLP95351.1 (Magnesium transport protein CorA [Symbiodinium microadriaticum]) HSP 1 Score: 155.2 bits (391), Expect = 4.900e-34 Identity = 82/213 (38.50%), Postives = 133/213 (62.44%), Query Frame = 0 Query: 251 FENLVAALKVDYSVLRQGNSKHLLYRILDEAVDYLLPIARAYRTRVRLFQAHLHRNESKFTKEQMRLVLGMKSELQRLQRRIRPMKAVVRHLMDDEQIGHDMKVYLEDVLDHVVRGLEEIGGCIEMCDSTKEEFKSLRDQRTNEVLYTLTVVTTMFVPLQFLTGVYGMNFVNAEGHPTMP---ELLWPRGYLFFWCMAATLFSVSLYFFRTHL 461 F +V ++ DYS+LR GN+ +L+R++D +D L PI AYR ++R F + + E++ +K+ + +L K EL +QR++RP+ V++HL+ D+ I D+ YLEDV DH+ LEE+ I +C+S ++E S RD++ +VLY LT+VTT+ +P LTG++GMN+++ EG P +P + RGY FW + T V FR ++ Sbjct: 634 FAGVVRQIQRDYSMLRAGNASWILWRLVDVTIDELSPILSAYRAQLRWFSSLITTQEARVSKDVEKRLLRSKVELDWVQRKVRPILKVLKHLIKDKAIDPDVTRYLEDVEDHLNLFLEEVSRIIGVCNSLRDEVNSYRDRQQQKVLYVLTLVTTLVMPTHLLTGIFGMNWIDEEGQPVVPGFGVMAENRGYYLFWGTSITFTFVIWTTFRRYI 846
BLAST of NO08G01080 vs. NCBI_GenBank
Match: XP_005855097.1 (magnesium and cobalt transport protein, partial [Nannochloropsis gaditana CCMP526] >EKU21263.1 magnesium and cobalt transport protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 137.1 bits (344), Expect = 1.400e-28 Identity = 71/194 (36.60%), Postives = 117/194 (60.31%), Query Frame = 0 Query: 249 HIFENLVAALKVDYSVLRQGNSKHLLYRILDEAVDYLLPIARAYRTRVRLFQAHLHRNESKFTKEQMRLVLGMKSELQRLQRRIRPMKAVVRHLMDDEQIGHDMKVYLEDVLDHVVRGLEEIGGCIEMCDSTKEEFKSLRDQRTNEVLYTLTVVTTMFVPLQFLTGVYGMNFVNAEGHPTMPELLWPRGYLFFW 443 H+ + + + + + ++ LL+ ILD VD L+PI AY+ RV FQ LH++ + F K + ++V+ K +L LQRR+ K ++R L+ ++++Y +DV DH+ R L+ + G M S +E + R++R NE+L +T++T++F P FL GV+GMNF ++G P+MPEL W GYL+FW Sbjct: 177 HVMLEVAEGMYHNRGTVEENSTHWLLHSILDYNVDRLVPIVEAYQIRVSYFQDMLHQSGANFGKGRTKMVMDTKLDLLWLQRRVALSKPIIRQLI--RIAPTELQLYYQDVDDHLERCLDGLSGLSNMAQSIIDEAHNHREERINEILLFITIITSIFTPASFLAGVFGMNFQTSQGDPSMPELSWEYGYLWFW 368
BLAST of NO08G01080 vs. NCBI_GenBank
Match: EWM26973.1 (magnesium and cobalt transport protein [Nannochloropsis gaditana]) HSP 1 Score: 137.1 bits (344), Expect = 1.400e-28 Identity = 71/194 (36.60%), Postives = 117/194 (60.31%), Query Frame = 0 Query: 249 HIFENLVAALKVDYSVLRQGNSKHLLYRILDEAVDYLLPIARAYRTRVRLFQAHLHRNESKFTKEQMRLVLGMKSELQRLQRRIRPMKAVVRHLMDDEQIGHDMKVYLEDVLDHVVRGLEEIGGCIEMCDSTKEEFKSLRDQRTNEVLYTLTVVTTMFVPLQFLTGVYGMNFVNAEGHPTMPELLWPRGYLFFW 443 H+ + + + + + ++ LL+ ILD VD L+PI AY+ RV FQ LH++ + F K + ++V+ K +L LQRR+ K ++R L+ ++++Y +DV DH+ R L+ + G M S +E + R++R NE+L +T++T++F P FL GV+GMNF ++G P+MPEL W GYL+FW Sbjct: 630 HVMLEVAEGMYHNRGTVEENSTHWLLHSILDYNVDRLVPIVEAYQIRVSYFQDMLHQSGANFGKGRTKMVMDTKLDLLWLQRRVALSKPIIRQLI--RIAPTELQLYYQDVDDHLERCLDGLSGLSNMAQSIIDEAHNHREERINEILLFITIITSIFTPASFLAGVFGMNFQTSQGDPSMPELSWEYGYLWFW 821
BLAST of NO08G01080 vs. NCBI_GenBank
Match: CEP03812.1 (hypothetical protein PBRA_003419 [Plasmodiophora brassicae]) HSP 1 Score: 135.6 bits (340), Expect = 4.000e-28 Identity = 69/209 (33.01%), Postives = 122/209 (58.37%), Query Frame = 0 Query: 250 IFENLVAALKVDYSVLRQGNSKHLLYRILDEAVDYLLPIARAYRTRVRLFQAHLHRNESKFTKEQMRLVLGMKSELQRLQRRIRPMKAVVRHLMDDEQIGHDMKVYLEDVLDHVVRGLEEIGGCIEMCDSTKEEFKSLRDQRTNEVLYTLTVVTTMFVPLQFLTGVYGMNFVNAEGH-PTMPELLWPRGYLFFWCMAATLFSVSLYFFR 458 +F +L+ L +YS+LR+G+++ L + +L+ L + A R + Q LH E+ + E +++++ + +L+ LQR++RP++ ++R + D+ + ++ YL D+ + + L ++ I C+S + E ++ +++R N +LYTLT VTT F+P QFLTGVYGMNF N + +PEL W GY FW + L + F R Sbjct: 392 MFADLMGQLSSNYSMLRRGSTQWLQFAMLEIISKNLTEVVDALRLFIIYHQDLLHTEEAGYKTENIKMIIALGDDLENLQRKVRPLRRIMRSVADETALEISLRRYLADLDEDINNSLLDMEQMISQCESLRNEVRTYKEERMNNILYTLTGVTTAFIPAQFLTGVYGMNFYNVQTELSPIPELTWTYGYPMFWVLVVLLSTTISVFVR 600
BLAST of NO08G01080 vs. NCBI_GenBank
Match: XP_002782308.1 (magnesium and cobalt transport protein, putative [Perkinsus marinus ATCC 50983] >EER14103.1 magnesium and cobalt transport protein, putative [Perkinsus marinus ATCC 50983]) HSP 1 Score: 131.3 bits (329), Expect = 7.500e-27 Identity = 77/210 (36.67%), Postives = 119/210 (56.67%), Query Frame = 0 Query: 250 IFENLVAALKVDYSVLRQGNSKHLLYRIL-DEAVDYLLPIARAYRTRVRLFQAHLHRNESKFTKEQMRLVLGMKSELQRLQRRIRPMKAVVRHLMDDEQIGHDMKVYLEDVLDHVVRGLEEIGGCIEMCDSTKEEFKSLRDQRTNEVLYTLTVVTTMFVPLQFLTGVYGMNFVN-AEGHPTMPELLWPRGYLFFWCMAATLFSVSLYFFR 458 IF N + LK YS +R G++ LL++IL D DY+L + +AY + + Q L R KF ++ ++ + + +L +L R +RP+ V+ + D ++Y D+ + R LEE E E+++ + +T+ +LY LT+VTT FVP QFLTGVYGMNF N G P MPEL+W GYL+FW + T+ S+ + +R Sbjct: 443 IFRNALGNLKTSYSNVRTGDTHTLLFKILCDITEDYIL-VGQAYDASLSVLQRRLDREMDKFYQKDVKRLRKIVRQLGQLYRMVRPVLDVLETAVSYRHWSPDSQMYTSDIRSNTHRFLEESLALRENARMMLEQYRQYCESKTSNILYVLTLVTTTFVPGQFLTGVYGMNFQNPVTGDPGMPELMWKYGYLYFWLLLLTITSLIFFLYR 651
BLAST of NO08G01080 vs. NCBI_GenBank
Match: XP_002778761.1 (magnesium and cobalt transport protein, putative [Perkinsus marinus ATCC 50983] >EER10556.1 magnesium and cobalt transport protein, putative [Perkinsus marinus ATCC 50983]) HSP 1 Score: 128.6 bits (322), Expect = 4.900e-26 Identity = 74/210 (35.24%), Postives = 120/210 (57.14%), Query Frame = 0 Query: 250 IFENLVAALKVDYSVLRQGNSKHLLYRIL-DEAVDYLLPIARAYRTRVRLFQAHLHRNESKFTKEQMRLVLGMKSELQRLQRRIRPMKAVVRHLMDDEQIGHDMKVYLEDVLDHVVRGLEEIGGCIEMCDSTKEEFKSLRDQRTNEVLYTLTVVTTMFVPLQFLTGVYGMNFVN-AEGHPTMPELLWPRGYLFFWCMAATLFSVSLYFFR 458 IF N + LK YS +R G++ LL+++L D DY+L + +AY + + Q L R KF ++ ++ + + +L +L R +RP+ V+ + D ++Y D+ + + LEE E E+++ + RT+ ++Y LT+VTT+FVP QFLTG+YGMNF N G P MPEL+W GYL+FW + T+ S+ + +R Sbjct: 352 IFRNALGNLKTSYSNVRTGDTHTLLFKVLCDITEDYIL-VGQAYDASLSVLQRRLDREMDKFYQKDVKRLRKIVRQLGQLYRMVRPVLDVLETAVGYRHWSPDSQMYTSDIRSNTHQFLEESLALRENARMMLEQYRQYCESRTSNIVYVLTLVTTIFVPGQFLTGIYGMNFQNPLTGDPGMPELMWNYGYLYFWLLLLTITSLIFFLYR 560
BLAST of NO08G01080 vs. NCBI_GenBank
Match: XP_002778762.1 (magnesium and cobalt transport protein, putative [Perkinsus marinus ATCC 50983] >EER10557.1 magnesium and cobalt transport protein, putative [Perkinsus marinus ATCC 50983]) HSP 1 Score: 128.3 bits (321), Expect = 6.400e-26 Identity = 76/210 (36.19%), Postives = 119/210 (56.67%), Query Frame = 0 Query: 250 IFENLVAALKVDYSVLRQGNSKHLLYRIL-DEAVDYLLPIARAYRTRVRLFQAHLHRNESKFTKEQMRLVLGMKSELQRLQRRIRPMKAVVRHLMDDEQIGHDMKVYLEDVLDHVVRGLEEIGGCIEMCDSTKEEFKSLRDQRTNEVLYTLTVVTTMFVPLQFLTGVYGMNFVN-AEGHPTMPELLWPRGYLFFWCMAATLFSVSLYFFR 458 IF + + LK YS +R G++ LL++IL D DY+L + +AY + + Q L R KF ++ ++ + + +L +L R +RP+ V+ + D ++Y D+ + + LEE E E+++ + RT+ +LY LT+VTT FVP QFLTGVYGMNF + G P MPELLW GYL+FW + T+ S+ + +R Sbjct: 457 IFRSALGNLKTSYSNVRTGDTHTLLFKILCDITEDYIL-VGQAYDASLSVLQRRLDREMDKFYQKDVKRLRKIVRQLGQLYRMVRPVLDVLETAVSYRHWSPDSQMYTSDIRSNTHQFLEESLALRENARMMLEQYRQYCESRTSNILYVLTLVTTTFVPGQFLTGVYGMNFQDPLTGKPGMPELLWSHGYLYFWLLLLTITSLIFFLYR 665
BLAST of NO08G01080 vs. NCBI_GenBank
Match: XP_002782312.1 (magnesium and cobalt transport protein, putative [Perkinsus marinus ATCC 50983] >EER14107.1 magnesium and cobalt transport protein, putative [Perkinsus marinus ATCC 50983]) HSP 1 Score: 127.5 bits (319), Expect = 1.100e-25 Identity = 76/210 (36.19%), Postives = 117/210 (55.71%), Query Frame = 0 Query: 250 IFENLVAALKVDYSVLRQGNSKHLLYRIL-DEAVDYLLPIARAYRTRVRLFQAHLHRNESKFTKEQMRLVLGMKSELQRLQRRIRPMKAVVRHLMDDEQIGHDMKVYLEDVLDHVVRGLEEIGGCIEMCDSTKEEFKSLRDQRTNEVLYTLTVVTTMFVPLQFLTGVYGMNFVN-AEGHPTMPELLWPRGYLFFWCMAATLFSVSLYFFR 458 IF N + LK YS +R G++ LL++IL D DY+L + +AY + + Q L R KF ++ ++ + + +L +L R RP+ V+ + D ++Y D+ + R +EE E E+++ + +T+ +LY LT+VTT FVP QFLTGVYGMNF N G P MPEL+W GYL+FW + T+ S+ +R Sbjct: 454 IFRNALGNLKTSYSNVRTGDTHTLLFKILCDITEDYIL-VGQAYDASLSVLQRRLDREMDKFYQKDVKRLRKIVRQLGQLYRMARPVLDVLETAVSYRHWSPDSQMYTSDIRSNTHRFVEESLALRENARMMLEQYRQYCESKTSNILYVLTLVTTTFVPGQFLTGVYGMNFQNPVTGDPGMPELMWSHGYLYFWLLLLTITSLIFSLYR 662
BLAST of NO08G01080 vs. NCBI_GenBank
Match: XP_002782310.1 (hypothetical protein Pmar_PMAR020888 [Perkinsus marinus ATCC 50983] >EER14105.1 hypothetical protein Pmar_PMAR020888 [Perkinsus marinus ATCC 50983]) HSP 1 Score: 125.2 bits (313), Expect = 5.400e-25 Identity = 73/210 (34.76%), Postives = 118/210 (56.19%), Query Frame = 0 Query: 250 IFENLVAALKVDYSVLRQGNSKHLLYRIL-DEAVDYLLPIARAYRTRVRLFQAHLHRNESKFTKEQMRLVLGMKSELQRLQRRIRPMKAVVRHLMDDEQIGHDMKVYLEDVLDHVVRGLEEIGGCIEMCDSTKEEFKSLRDQRTNEVLYTLTVVTTMFVPLQFLTGVYGMNFVN-AEGHPTMPELLWPRGYLFFWCMAATLFSVSLYFFR 458 IF N + LK YS +R G++ LL++IL D DY+L + +AY + + Q L R KF ++ ++ + + +L +L R RP+ V+ + D ++Y D+ + R LEE E E+++ + +T+ +LY LT+VTT FVP+ FLTG+YGMN+ N G P +PEL+W GYL+FW + T+ S+ + +R Sbjct: 455 IFRNALGNLKTSYSNVRTGDTHTLLFKILCDITEDYIL-VGQAYDASLSVLQRRLEREMDKFYQKDVKRLRKIVRQLGQLYRMSRPVLDVLDTAVGYRYWSPDSQMYTSDIRSNTHRFLEESLALRENSRMMLEQYRQYCESKTSNILYALTLVTTTFVPMHFLTGIYGMNYQNPTTGDPGIPELMWTYGYLYFWLLLLTISSLIFFLYR 663 The following BLAST results are available for this feature:
BLAST of NO08G01080 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G01080 ID=NO08G01080|Name=NO08G01080|organism=Nannochloropsis oceanica|type=gene|length=3457bpback to top protein sequence of NO08G01080.1 >NO08G01080.1-protein ID=NO08G01080.1-protein|Name=NO08G01080.1|organism=Nannochloropsis oceanica|type=polypeptide|length=464bpback to top protein sequence of NO08G01080.2 >NO08G01080.2-protein ID=NO08G01080.2-protein|Name=NO08G01080.2|organism=Nannochloropsis oceanica|type=polypeptide|length=514bpback to top protein sequence of NO08G01080.3 >NO08G01080.3-protein ID=NO08G01080.3-protein|Name=NO08G01080.3|organism=Nannochloropsis oceanica|type=polypeptide|length=518bpback to top protein sequence of NO08G01080.4 >NO08G01080.4-protein ID=NO08G01080.4-protein|Name=NO08G01080.4|organism=Nannochloropsis oceanica|type=polypeptide|length=518bpback to top Synonyms
Publications
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