NO07G02500, NO07G02500 (gene) Nannochloropsis oceanica

Overview
NameNO07G02500
Unique NameNO07G02500
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1959
Alignment locationchr7:724810..726768 -

Link to JBrowse

Properties
Property NameValue
DescriptionHistidyl-trna synthetase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:724810..726768 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR006195aa-tRNA-synth_II
IPR004516HisRS/HisZ
IPR004154Anticodon-bd
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0000166nucleotide binding
Homology
BLAST of NO07G02500 vs. NCBI_GenBank
Match: EJK74067.1 (hypothetical protein THAOC_04281 [Thalassiosira oceanica])

HSP 1 Score: 547.7 bits (1410), Expect = 4.300e-152
Identity = 281/473 (59.41%), Postives = 345/473 (72.94%), Query Frame = 0
Query:  128 DGGRASAAVKQDSNKRADKKGTSQPQKAK--LDLQPPRGTRDFYPEEMRLRNWLFGHWRQVAREHGFEEYDAPVLESEALYVRKAGEEVTEQLYNFEDKGGRRVALRPEMTPSLARMVMAKRNGLVLPVKWFSFPQCWRYERMTRGRRREHYQWNMDVWGISGVEAEAELLAAIVSFFARVGLTANDVGIKVNSRGVLTEVLAALGVPEENFAATCVLVDKLE-------------------KIPLSAIQDDLTALGLEESVVLRLLEVIQSKDVEGLEKAIGKDSAALGQLRQLFEYARAYGFDDWLVLDASVVRGLAYYTGVVFEAFDRQGELRAICGGGRYDKLLEAFGGEALPAVGFGFGDAVIIELLESKKLVPALP-LRLDASVFAMETGLQTTAIAAATSLRSAGLMVDLQLEARKTKWAFKHADRLGATYVVLVGAGEAAEGKVKVKHMATGQQETLPVVDLGNW 579
            + GR+SAAV         K G+ +  +AK  LD  PP+GTRDFYP +MRLR WLF  WR VA  +GF EYDAPVLESE+LY RKAGEEVT+QLYNF DKG R VALRPEMTPSLARMVMAK+ GL LP+KWFS PQCWRYERMTRGRRREH+QWNMD+WG++G+EAEAELL+A+V+FF  VGLT+ DVGIK+NSRGV+ EVL  LGVPEE FAATCVLVDKLE                   K+P++AIQ +L  LGLE S + +L +V+ +  +E +   + KDS A+ +L QLFE  +AYG +DW++ DASVVRGLAYYTGVVFEAFDR+G LRAI GGGRYDKLLE FGG+  PA GFGFGDAVI+ELL+ + ++P       D  VFAM + L   AI  A++LR+ G  VDL LEA+KTKW FKHA R  A + V+V   E   G+V +K ++ G+Q+T+ +  L +W
Sbjct:   48 ENGRSSAAVA--DKDLLSKTGSEKNNRAKVALDTNPPKGTRDFYPPDMRLRTWLFNQWRDVAALYGFSEYDAPVLESESLYTRKAGEEVTQQLYNFVDKGDRAVALRPEMTPSLARMVMAKKGGLNLPLKWFSIPQCWRYERMTRGRRREHFQWNMDIWGVNGIEAEAELLSAMVTFFKNVGLTSEDVGIKLNSRGVIGEVLTELGVPEEKFAATCVLVDKLEKVRRYFTDVICCRHSQEKFKVPIAAIQGELEELGLETSTIEKLTDVLTNTSIESISAVLPKDSVAVKELTQLFELCKAYGIEDWVMFDASVVRGLAYYTGVVFEAFDRKGVLRAIAGGGRYDKLLETFGGDPTPAAGFGFGDAVIVELLKERDVLPTFEGSGYDTVVFAMNSDLYGVAINVASTLRAEGQSVDLILEAKKTKWVFKHASRNEAKHCVIVAGNEYENGEVSIKDLSIGEQKTVKIDALSDW 518          
BLAST of NO07G02500 vs. NCBI_GenBank
Match: OEU21431.1 (histidyl-tRNA synthetase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 540.4 bits (1391), Expect = 6.900e-150
Identity = 276/462 (59.74%), Postives = 335/462 (72.51%), Query Frame = 0
Query:  120 TLMASDAADGGRASAAVKQDSNKRADKKGTSQPQKAKLDLQPPRGTRDFYPEEMRLRNWLFGHWRQVAREHGFEEYDAPVLESEALYVRKAGEEVTEQLYNFEDKGGRRVALRPEMTPSLARMVMAKRNGLVLPVKWFSFPQCWRYERMTRGRRREHYQWNMDVWGISGVEAEAELLAAIVSFFARVGLTANDVGIKVNSRGVLTEVLAALGVPEENFAATCVLVDKLEKIPLSAIQDDLTALGLEESVVLRLLEVIQSKDVEGLEKAIGKDSAALGQLRQLFEYARAYGFDDWLVLDASVVRGLAYYTGVVFEAFDRQGELRAICGGGRYDKLLEAFGGEALPAVGFGFGDAVIIELLESKKLVPAL-PLRLDASVFAMETGLQTTAIAAATSLRSAGLMVDLQLEA-RKTKWAFKHADRLGATYVVLVGAGEAAEGKVKVKHMATGQQETLPVVDLGNWM 580
            T+  S+   GGR SA+V QD N      G  + +  KLD  PP+GTRDFYPE+MRLRNWLF  WR VA+ +GF EYDAPVLESEAL+ RKAGEEVT+QLYNF DKG R VALRPEMTPSLARMVMAK+ G+ LP+KWFS PQCWRYERMTRGRRREHYQWNMD+WG++G EA+AELL+A+V+FF  VGLT++DVGIKVNSR V+ EVL  LG+PEE FAATCVLVDKLEK+PL AIQ DL  +GL+ SVV +L +V+                             + Y  +DW++ DASVVRGLAYYTGVVFEAFDR+G LRAI GGGRYDKLLE FGG+  PA GFGFGDAVI+ELL+ + L+P+     +D  VFA    L  TAI+ AT LR AG  V+L LE  +K+KW FKHADRLGA YV ++G+ E    +V +K++  G+Q  + + +L  W+
Sbjct:   13 TIENSNGGGGGRVSASV-QDKNVLDKTNGKKKQKVTKLDTNPPKGTRDFYPEDMRLRNWLFDQWRDVAKTYGFSEYDAPVLESEALFTRKAGEEVTQQLYNFVDKGDRNVALRPEMTPSLARMVMAKKGGIPLPLKWFSIPQCWRYERMTRGRRREHYQWNMDIWGVAGEEADAELLSAMVTFFKSVGLTSDDVGIKVNSRLVIGEVLTELGIPEEKFAATCVLVDKLEKVPLDAIQGDLEEIGLDRSVVEKLTKVLTXXXXXXXXXXXXXXXXXXXXXXXXXXXCKTYEIEDWIIFDASVVRGLAYYTGVVFEAFDRKGVLRAIAGGGRYDKLLETFGGDPTPAAGFGFGDAVIVELLKDRDLLPSFASTGIDTVVFAQGPDLYNTAISVATKLRQAGQTVELVLEKNKKSKWVFKHADRLGAKYVAIIGSEEFENEQVAIKNLQDGEQSKISMNELSKWV 473          
BLAST of NO07G02500 vs. NCBI_GenBank
Match: XP_001699897.1 (histidine-tRNA ligase, partial [Chlamydomonas reinhardtii])

HSP 1 Score: 518.8 bits (1335), Expect = 2.100e-143
Identity = 262/424 (61.79%), Postives = 322/424 (75.94%), Query Frame = 0
Query:  153 QKAKLDLQPPRGTRDFYPEEMRLRNWLFGHWRQVAREHGFEEYDAPVLESEALYVRKAGEEVTEQLYNFEDKGGRRVALRPEMTPSLARMVMAKRNGLVLPVKWFSFPQCWRYERMTRGRRREHYQWNMDVWGISGVEAEAELLAAIVSFFARVGLTANDVGIKVNSRGVLTEVLAALGVPEENFAATCVLVDKLEKIPLSAIQDDLTALGLEESVVLRLLEVIQSKDVEGLEKAIGKDSAALGQLRQLFEYARAYGFDDWLVLDASVVRGLAYYTGVVFEAFDRQGELRAICGGGRYDKLLEAFG-GEALPAVGFGFGDAVIIELLESKKLVPALPLRLDASVFAMETGLQTTAIAAATSLRSAGLMVDLQLEARKTKWAFKHADRLGATYVVLVGAGEAAEGKVKVKHMATGQQETLPVVDL 576
            +K  +D QPPRGTRDF PE+MRLRNWLFG +  V+   GFE++DAPVLESE L+VRKAGEE+T+QLYNFEDKGGRRVALRPE+TPSLAR+V+ +   L LP KWF+  QCWRYERMTRGRRREHYQWNMD+ G+ GVEAEAELLAAIV+FF RVGLTA DVGIKV++R VL  VL   GVP E+FA  CV+VDKL+K+P   ++++L  LG+E S +  +L  +Q +D++ L   +G DS A+ +LR+L+E A  YGF DWLV D SVVRGLAYYTG VFEA DR G+LRAICGGGRYDKLL  FG  E  P  GFGFGDAVI+ELL+ + L+PA   R+D  V  ++ GL+  A   AT+LR  G  VDL LEA+K KWAFKHA++LGA+ +VLVGA E   G V VK +A  +Q+ + V +L
Sbjct:    5 RKGMIDTQPPRGTRDFPPEDMRLRNWLFGEFAAVSAAFGFEQFDAPVLESEELFVRKAGEEITDQLYNFEDKGGRRVALRPELTPSLARLVLQRGKQLPLPAKWFAIGQCWRYERMTRGRRREHYQWNMDIVGVPGVEAEAELLAAIVAFFERVGLTAADVGIKVSNRKVLQAVLTQYGVPPESFAKVCVIVDKLDKLPREKVEEELRVLGVEASTIDGVLGALQLRDLDQLAALLGADSEAVAELRRLWELAAGYGFQDWLVFDPSVVRGLAYYTGTVFEARDRAGQLRAICGGGRYDKLLATFGAAEDTPMAGFGFGDAVIVELLKDRGLLPAPAHRVDDVVVPLDGGLRPAAAGVATALRRGGRRVDLVLEAKKMKWAFKHAEKLGASRLVLVGASEWERGAVVVKDLAKFEQKEIQVAEL 428          
BLAST of NO07G02500 vs. NCBI_GenBank
Match: PRW20175.1 (histidine--tRNA chloroplastic mitochondrial [Chlorella sorokiniana])

HSP 1 Score: 515.0 bits (1325), Expect = 3.100e-142
Identity = 255/419 (60.86%), Postives = 313/419 (74.70%), Query Frame = 0
Query:  157 LDLQPPRGTRDFYPEEMRLRNWLFGHWRQVAREHGFEEYDAPVLESEALYVRKAGEEVTEQLYNFEDKGGRRVALRPEMTPSLARMVMAKRNGLVLPVKWFSFPQCWRYERMTRGRRREHYQWNMDVWGISGVEAEAELLAAIVSFFARVGLTANDVGIKVNSRGVLTEVLAALGVPEENFAATCVLVDKLEKIPLSAIQDDLTALGLEESVVLRLLEVIQSKDVEGLEKAIGKDSAALGQLRQLFEYARAYGFDDWLVLDASVVRGLAYYTGVVFEAFDRQGELRAICGGGRYDKLLEAFGGEALPAVGFGFGDAVIIELLESKKLVPALPLRLDASVFAMETGLQTTAIAAATSLRSAGLMVDLQLEARKTKWAFKHADRLGATYVVLVGAGEAAEGKVKVKHMATGQQETLPVVDL 576
            +D+ PPRGTRDF+PE+ R++NWLFG W  V+   GFE+ D PVLESE LYVRKAGEE+T+QLYNFEDKGGRRVALRPE+TPSLAR+V+ K  GL LP KWFS  QCWRYER TRGRRREHYQWNMD+ G++GVEAE+ELLAAIV+FF R+GL  +DVG+KV+SR VL  VLA  G+PE +F   CV+VDK+EKIP   + ++L  LG+    +  +L+ +  K VE LE  +G D+ A+  LRQLF  A AYG+ DWLV DASVVRGLAYYTGVVFE FDR G LRAICGGGRYDKLL  FGGE  P  GFGFGDAVI+ELL+ KKL+P L   +D  V   +  L+T A A A  LR+AG  VDL LE ++ KWAFK A+R  A  +VLV   E A+G V+VK++A+ ++  +P+  L
Sbjct:   99 VDINPPRGTRDFFPEDKRVQNWLFGEWAAVSEAFGFEQVDFPVLESEELYVRKAGEEITDQLYNFEDKGGRRVALRPELTPSLARLVLQKGKGLALPAKWFSIGQCWRYERATRGRRREHYQWNMDIVGVAGVEAESELLAAIVTFFQRLGLGPSDVGLKVSSRKVLQAVLARYGIPEASFGPVCVIVDKMEKIPREKVVEELAKLGVAADAIEGILQALAIKTVEELEALLGADNHAVADLRQLFSLAAAYGYADWLVFDASVVRGLAYYTGVVFEGFDRAGTLRAICGGGRYDKLLGTFGGEDQPCTGFGFGDAVIVELLKDKKLLPQLQHTVDDLVMPQDESLRTEATAIAQRLRAAGRRVDLVLEPKRLKWAFKQAERCNAARLVLVAPDEWAKGTVRVKNLASREEADVPLDQL 517          
BLAST of NO07G02500 vs. NCBI_GenBank
Match: PTQ47733.1 (hypothetical protein MARPO_0007s0136 [Marchantia polymorpha])

HSP 1 Score: 511.9 bits (1317), Expect = 2.600e-141
Identity = 255/444 (57.43%), Postives = 332/444 (74.77%), Query Frame = 0
Query:  132 ASAAVKQDSNKRADKKGTSQPQKAKLDLQPPRGTRDFYPEEMRLRNWLFGHWRQVAREHGFEEYDAPVLESEALYVRKAGEEVTEQLYNFEDKGGRRVALRPEMTPSLARMVMAKRNGLVLPVKWFSFPQCWRYERMTRGRRREHYQWNMDVWGISGVEAEAELLAAIVSFFARVGLTANDVGIKVNSRGVLTEVLAALGVPEENFAATCVLVDKLEKIPLSAIQDDLTALGLEESVVLRLLEVIQSKDVEGLEKAIGKDSAALGQLRQLFEYARAYGFDDWLVLDASVVRGLAYYTGVVFEAFDRQGELRAICGGGRYDKLLEAFGGEALPAVGFGFGDAVIIELLESKKLVPALPLRLDASVFAMETGLQTTAIAAATSLRSAGLMVDLQLEARKTKWAFKHADRLGATYVVLVGAGEAAEGKVKVKHMATGQQETLPVVDL 576
            +++A  Q+S +   + G        +D  PPRGTRDF PE+MRLR WLF ++R+V+   GFEE D PVLESE LY+RKAGEE+T+QLYNFEDKGGRRV LRPE+TPSLAR+V+ K     LP+KWF+  QCWRYERMTRGRRREHYQWNMD+ GI GVEAEAELL+AIV+FF+++G+T++DVGIK+++R VL EVL    +PE +FAA CV+VDK+EKIP + ++ +LTALGL    V  +L  +  + ++ LE+ +G D+ A+ +L+QLFE AR YGF+DWL  DASVVRGLAYYTG VFEAFDR G LRAICGGGRYDKLL  FGG   PA GFGFGDAVI+ELL+ KKL+P L   +D  V  +E  L+  A   A  LR+ G  VD+ +  +K KWAFKHA+RL A  +V++G+ E A+G V+VK +++ +++ LP+ +L
Sbjct:   79 SASATTQESVRGPSQAGPPSTDGGVIDTSPPRGTRDFPPEDMRLRTWLFNNFREVSSLFGFEEIDFPVLESEELYIRKAGEEITQQLYNFEDKGGRRVTLRPELTPSLARLVLQKGKSASLPLKWFAIGQCWRYERMTRGRRREHYQWNMDIIGIPGVEAEAELLSAIVAFFSKLGITSSDVGIKISNRKVLQEVLGRSVIPESSFAAVCVIVDKIEKIPRAEVEKELTALGLPVEAVDTILRALTLRSLDDLEELLGSDNEAVVELKQLFELARGYGFEDWLQFDASVVRGLAYYTGTVFEAFDRTGTLRAICGGGRYDKLLSTFGGVDTPACGFGFGDAVIVELLKEKKLLPELNHEVDDIVMPLEEELRPQAAIVAARLRTQGRRVDVVMGNKKMKWAFKHAERLQAKRMVILGSTEWAKGSVRVKDLSSREEKDLPLEEL 522          
BLAST of NO07G02500 vs. NCBI_GenBank
Match: OAE35711.1 (hypothetical protein AXG93_1154s1660 [Marchantia polymorpha subsp. ruderalis])

HSP 1 Score: 510.4 bits (1313), Expect = 7.600e-141
Identity = 254/444 (57.21%), Postives = 331/444 (74.55%), Query Frame = 0
Query:  132 ASAAVKQDSNKRADKKGTSQPQKAKLDLQPPRGTRDFYPEEMRLRNWLFGHWRQVAREHGFEEYDAPVLESEALYVRKAGEEVTEQLYNFEDKGGRRVALRPEMTPSLARMVMAKRNGLVLPVKWFSFPQCWRYERMTRGRRREHYQWNMDVWGISGVEAEAELLAAIVSFFARVGLTANDVGIKVNSRGVLTEVLAALGVPEENFAATCVLVDKLEKIPLSAIQDDLTALGLEESVVLRLLEVIQSKDVEGLEKAIGKDSAALGQLRQLFEYARAYGFDDWLVLDASVVRGLAYYTGVVFEAFDRQGELRAICGGGRYDKLLEAFGGEALPAVGFGFGDAVIIELLESKKLVPALPLRLDASVFAMETGLQTTAIAAATSLRSAGLMVDLQLEARKTKWAFKHADRLGATYVVLVGAGEAAEGKVKVKHMATGQQETLPVVDL 576
            +++A  Q+S +   + G        +D  PPRGTRDF PE+MRLR WLF ++R+V+   GFEE D PVLESE LY+RKAGEE+T+QLYNFEDKGGRRV LRPE+TPSLAR+V+ K     LP+KWF+  QCWRYERMTRGRRREHYQWNMD+ GI GVEAEAELL+AIV+FF+++G+T++DVGIK+++R VL EVL    +PE +FAA CV+VDK+EKIP + ++ +LTALGL    V  +L  +  + ++ LE+ +G D+ A+ +L+QLFE AR YGF+DWL  DASVVRGLAYYTG VFEAFDR G LRAICGGGRYDKLL  FGG   PA GFGFGDAVI+ELL+ KKL+P L   +D  V  +E  L+  A   A  LR+ G  VD+ +  +K KWAFKHA+RL A  +V++G+ E  +G V+VK +++ +++ LP+ +L
Sbjct:   62 SASATTQESVRGPSQAGPPSTDGGVIDTSPPRGTRDFPPEDMRLRTWLFNNFREVSSLFGFEEIDFPVLESEELYIRKAGEEITQQLYNFEDKGGRRVTLRPELTPSLARLVLQKGKSASLPLKWFAIGQCWRYERMTRGRRREHYQWNMDIIGIPGVEAEAELLSAIVAFFSKLGITSSDVGIKISNRKVLQEVLGRSVIPESSFAAVCVIVDKIEKIPRAEVEKELTALGLPVEAVDTILRALTLRSLDDLEELLGSDNEAVVELKQLFELARGYGFEDWLQFDASVVRGLAYYTGTVFEAFDRTGTLRAICGGGRYDKLLSTFGGVDTPACGFGFGDAVIVELLKEKKLLPELNHEVDDIVMPLEEELRPQAAIVAARLRTQGRRVDVVMGNKKMKWAFKHAERLQAKRMVILGSTEWTKGSVRVKDLSSREEKDLPLEEL 505          
BLAST of NO07G02500 vs. NCBI_GenBank
Match: KXZ54423.1 (hypothetical protein GPECTOR_5g77 [Gonium pectorale])

HSP 1 Score: 509.6 bits (1311), Expect = 1.300e-140
Identity = 253/419 (60.38%), Postives = 311/419 (74.22%), Query Frame = 0
Query:  157 LDLQPPRGTRDFYPEEMRLRNWLFGHWRQVAREHGFEEYDAPVLESEALYVRKAGEEVTEQLYNFEDKGGRRVALRPEMTPSLARMVMAKRNGLVLPVKWFSFPQCWRYERMTRGRRREHYQWNMDVWGISGVEAEAELLAAIVSFFARVGLTANDVGIKVNSRGVLTEVLAALGVPEENFAATCVLVDKLEKIPLSAIQDDLTALGLEESVVLRLLEVIQSKDVEGLEKAIGKDSAALGQLRQLFEYARAYGFDDWLVLDASVVRGLAYYTGVVFEAFDRQGELRAICGGGRYDKLLEAFGGEALPAVGFGFGDAVIIELLESKKLVPALPLRLDASVFAMETGLQTTAIAAATSLRSAGLMVDLQLEARKTKWAFKHADRLGATYVVLVGAGEAAEGKVKVKHMATGQQETLPVVDL 576
            +D QPPRGTRDF+PE+MRLRNWLFG +  V+   GFE++DAPVLESE L+VRKAGEE+T+QLYNFEDKG RRVALRPE+TPSLAR+V+ +   L LP KWF+  QCWRYER TRGRRREHYQWNMD+ G+ GVEAEAELLAAIV+ F RVGLT  DVGIKV+SR VL  VL   GVP E+FA  CV+VDKL+K+P   ++++L ALG+  + +  +L  +  + +E L   +G+DS A+  L +LFE A  YG+ DWLV D SVVRGLAYYTGVVFE FDR G+LRAICGGGRYD+LL + GG   P VGFGFGDAVI+ELL+ K  +PA P  +D  V  ++  L+  A   A+ LR AG  VDL LEA+K KWAFKHA++L A+ +VLVGA E   G V VK +A  +Q  +P   L
Sbjct:    2 IDTQPPRGTRDFFPEDMRLRNWLFGEFAAVSASFGFEQFDAPVLESEELFVRKAGEEITDQLYNFEDKGQRRVALRPELTPSLARLVLQRGKALTLPAKWFAIGQCWRYERTTRGRRREHYQWNMDIIGVPGVEAEAELLAAIVALFERVGLTKEDVGIKVSSRKVLQSVLTQYGVPPESFARVCVIVDKLDKLPREKVEEELAALGVPAATIDGVLSALSLRSLEALGDLVGRDSEAVADLNRLFELAEGYGYKDWLVFDPSVVRGLAYYTGVVFEGFDRAGQLRAICGGGRYDRLLGSLGGADSPMVGFGFGDAVIVELLKDKGKLPAPPHTVDDVVVPLDASLRPAAAGIASRLRRAGRRVDLVLEAKKMKWAFKHAEKLHASRLVLVGASEWERGNVVVKDLAKFEQAEVPADSL 420          
BLAST of NO07G02500 vs. NCBI_GenBank
Match: XP_005844064.1 (hypothetical protein CHLNCDRAFT_56349 [Chlorella variabilis] >EFN51962.1 hypothetical protein CHLNCDRAFT_56349 [Chlorella variabilis])

HSP 1 Score: 508.8 bits (1309), Expect = 2.200e-140
Identity = 256/419 (61.10%), Postives = 310/419 (73.99%), Query Frame = 0
Query:  157 LDLQPPRGTRDFYPEEMRLRNWLFGHWRQVAREHGFEEYDAPVLESEALYVRKAGEEVTEQLYNFEDKGGRRVALRPEMTPSLARMVMAKRNGLVLPVKWFSFPQCWRYERMTRGRRREHYQWNMDVWGISGVEAEAELLAAIVSFFARVGLTANDVGIKVNSRGVLTEVLAALGVPEENFAATCVLVDKLEKIPLSAIQDDLTALGLEESVVLRLLEVIQSKDVEGLEKAIGKDSAALGQLRQLFEYARAYGFDDWLVLDASVVRGLAYYTGVVFEAFDRQGELRAICGGGRYDKLLEAFGGEALPAVGFGFGDAVIIELLESKKLVPALPLRLDASVFAMETGLQTTAIAAATSLRSAGLMVDLQLEARKTKWAFKHADRLGATYVVLVGAGEAAEGKVKVKHMATGQQETLPVVDL 576
            +DL PPRGTRDF+PE+ RL+NWLF  +  V+R +GF++ D PVLESE LYVRKAGEE+TEQLYNFEDKGGRRV LRPE+TPSLAR+ + K  GL LP KWFS  QCWRYER TRGRRREHYQWNMDV G+ GVEAEAELLAAIV+FF R+GL A DVG+KV+SR VL  VL   GV E +F   CV+VDK+EKIP   + ++L  LG+    +  +L+ +    VE LE  +G D+ A+  LR+LFE A AYG+ DWLV DASVVRGLAYYTG+VFE FDR G+LRAICGGGRYD+LL  FGGE  P  GFGFGDAVI+ELL+ +KL+P L   +D  V A E GL+  A A A  LR+AG  VDL LE ++ KWAFK A+R  A  +VLV   E A G V+VK +A+ Q+  +PV +L
Sbjct:    2 VDLNPPRGTRDFFPEDKRLQNWLFDEFAAVSRLYGFQQIDFPVLESEELYVRKAGEEITEQLYNFEDKGGRRVTLRPELTPSLARLALQKGKGLALPAKWFSIGQCWRYERATRGRRREHYQWNMDVIGVPGVEAEAELLAAIVTFFQRLGLGAADVGLKVSSRKVLQAVLQRYGVAEASFGPVCVVVDKMEKIPRDKVVEELAKLGVAADAIDGILQALALSSVEELEGLLGGDNVAVADLRRLFELAAAYGYADWLVFDASVVRGLAYYTGMVFEGFDRAGQLRAICGGGRYDRLLGTFGGEDQPCAGFGFGDAVIVELLKDRKLLPQLRHEVDDLVMAQEEGLRAEATALAARLRAAGRRVDLVLEPKRIKWAFKQAERCSAARLVLVAPDEWANGTVRVKDLASRQERDVPVEEL 420          
BLAST of NO07G02500 vs. NCBI_GenBank
Match: GAQ86789.1 (Histidyl-tRNA synthetase [Klebsormidium nitens])

HSP 1 Score: 508.8 bits (1309), Expect = 2.200e-140
Identity = 252/445 (56.63%), Postives = 328/445 (73.71%), Query Frame = 0
Query:  131 RASAAVKQDSNKRADKKGTSQPQKAKLDLQPPRGTRDFYPEEMRLRNWLFGHWRQVAREHGFEEYDAPVLESEALYVRKAGEEVTEQLYNFEDKGGRRVALRPEMTPSLARMVMAKRNGLVLPVKWFSFPQCWRYERMTRGRRREHYQWNMDVWGISGVEAEAELLAAIVSFFARVGLTANDVGIKVNSRGVLTEVLAALGVPEENFAATCVLVDKLEKIPLSAIQDDLTALGLEESVVLRLLEVIQSKDVEGLEKAIGKDSAALGQLRQLFEYARAYGFDDWLVLDASVVRGLAYYTGVVFEAFDRQGELRAICGGGRYDKLLEAFGGEALPAVGFGFGDAVIIELLESKKLVPALPLRLDASVFAMETGLQTTAIAAATSLRSAGLMVDLQLEARKTKWAFKHADRLGATYVVLVGAGEAAEGKVKVKHMATGQQETLPVVDL 576
            RA  A    + K       S  ++A +D QPPRGTRDF PEEMRLR WLF H+R+V+R  GFEE+DAPVLESE L+ RKAGEE+  QLYNF+DKGGRRVALRPE+TPSLAR++++K  GL LP KWF   QCWRYER TRGRRREHYQWNMDV+G+ GVEAEAELL+AIV+FF+R+GLTA DVG +V+SR +L +VL    +P E+FA+ CV+VDK++K+P   I+ +L AL +    V  +L+ +  K + GLE  +G DS A+ +L+QLF  A  YG  DWL  DASVVRGLAYYTGVVFEAFDR+G+LRAICGGGRYDKLL  FGG+  PA GFGFGDAVI+ELL+ + L+P LP  +D  +  ++   +    + A  LR+AG  V+L LE++K KW FK  +++GA+ ++++G+ EAA+  VKVK +AT ++  + + DL
Sbjct:   85 RAEKAASSTALKTPSVSAPSSKKQALIDTQPPRGTRDFPPEEMRLRTWLFNHFREVSRLFGFEEFDAPVLESEELFTRKAGEEIVGQLYNFDDKGGRRVALRPELTPSLARIILSKGKGLSLPAKWFGIGQCWRYERTTRGRRREHYQWNMDVFGVQGVEAEAELLSAIVTFFSRLGLTAKDVGFRVSSRKLLQDVLGRYSIPSESFASVCVVVDKIDKLPREEIEKELGALSVPPEAVTGILQALTLKSLSGLEDLLGADSDAVRELKQLFALADGYGIADWLQFDASVVRGLAYYTGVVFEAFDREGKLRAICGGGRYDKLLSTFGGDDTPACGFGFGDAVIVELLKERGLLPDLPHVVDDVLVTLDEECRPMLNSVAAKLRAAGRSVELVLESKKMKWVFKRVEQVGASRLIVIGSDEAAQEAVKVKDLATREETLVMIKDL 529          
BLAST of NO07G02500 vs. NCBI_GenBank
Match: XP_003063705.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH52078.1 predicted protein [Micromonas pusilla CCMP1545])

HSP 1 Score: 501.5 bits (1290), Expect = 3.500e-138
Identity = 253/414 (61.11%), Postives = 309/414 (74.64%), Query Frame = 0
Query:  157 LDLQPPRGTRDFYPEEMRLRNWLFGHWRQVAREHGFEEYDAPVLESEALYVRKAGEEVTEQLYNFEDKGGRRVALRPEMTPSLARMVMAKRNGLVLPVKWFSFPQCWRYERMTRGRRREHYQWNMDVWGISGVEAEAELLAAIVSFFARVGLTANDVGIKVNSRGVLTEVLAALGVPEENFAATCVLVDKLEKIPLSAIQDDLTALGLEESVVLRLLEVIQSKDVEGLEKAIGKDSAALGQLRQLFEYARAYGFDDWLVLDASVVRGLAYYTGVVFEAFDRQGELRAICGGGRYDKLLEAFGGEALPAVGFGFGDAVIIELLESKKLVPALPLR--LDASVFAMETGLQTTAIAAATSLRSAGLMVDLQLE-ARKTKWAFKHADRLGATYVVLVGAGEAAEGKVKVKHMATGQQ 568
            +DLQPP+GTRDF PEEMR+RNWLFGH+R VAR  GFEE+DAPVLE+E LYVRKAGEE+T QLYNFEDKG RRVALRPE+TPS AR+++ +   L LP KWF+  QCWRYERMTRGRRREHYQWNMD+ G+ GVEAEAELLAAIV FF R+G+T+ DVG+KV+SR VL  VL    VPE +FA  CV+VDK+EK+P   I ++L  LG+ E  +  +L  ++ K ++ L   +G D+ A+  L  LF +A AYG+ DWLV DASVVRGL+YYTGVVFE FDR GELRAICGGGRYDKLL A GGE    VGFGFGDAVI+EL+  + L+P       +D  V+ M   L+  A+A A  LR AG  VDL +E  +K KW FKHA+R GA  VVL+G  E AEGKV+VK +A+ ++
Sbjct:   81 IDLQPPKGTRDFAPEEMRVRNWLFGHFRDVARTFGFEEWDAPVLETEELYVRKAGEEITTQLYNFEDKGNRRVALRPELTPSFARLILQQGKSLALPAKWFAIGQCWRYERMTRGRRREHYQWNMDIVGVDGVEAEAELLAAIVEFFTRLGITSADVGLKVSSRKVLQAVLTRYDVPEASFAPVCVVVDKIEKLPREKIVEELAGLGVTEDAIDGILAAMEMKTIDDLAALLGADADAVKDLTTLFSHAEAYGYADWLVFDASVVRGLSYYTGVVFEGFDRAGELRAICGGGRYDKLLGALGGEDRSMVGFGFGDAVIMELVNDRGLLPESLKTGCVDDLVYPMTAALRPAAMAIAARLRKAGRRVDLVIEDGKKPKWVFKHAERSGAARVVLLGEKEWAEGKVRVKDLASREE 494          
The following BLAST results are available for this feature:
BLAST of NO07G02500 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EJK74067.14.300e-15259.41hypothetical protein THAOC_04281 [Thalassiosira oc... [more]
OEU21431.16.900e-15059.74histidyl-tRNA synthetase [Fragilariopsis cylindrus... [more]
XP_001699897.12.100e-14361.79histidine-tRNA ligase, partial [Chlamydomonas rein... [more]
PRW20175.13.100e-14260.86histidine--tRNA chloroplastic mitochondrial [Chlor... [more]
PTQ47733.12.600e-14157.43hypothetical protein MARPO_0007s0136 [Marchantia p... [more]
OAE35711.17.600e-14157.21hypothetical protein AXG93_1154s1660 [Marchantia p... [more]
KXZ54423.11.300e-14060.38hypothetical protein GPECTOR_5g77 [Gonium pectoral... [more]
XP_005844064.12.200e-14061.10hypothetical protein CHLNCDRAFT_56349 [Chlorella v... [more]
GAQ86789.12.200e-14056.63Histidyl-tRNA synthetase [Klebsormidium nitens][more]
XP_003063705.13.500e-13861.11predicted protein [Micromonas pusilla CCMP1545] >E... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL100nonsL100Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR072ncniR072Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000609NSK000609Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G02500.1NO07G02500.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|580814gene_2576Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100046g1gene3427Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G02500.1NO07G02500.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G02500 ID=NO07G02500|Name=NO07G02500|organism=Nannochloropsis oceanica|type=gene|length=1959bp
AGCAGGATTCAATTGTGTATTTTTATGTTTACTCACTTTTAATGAGAAGT
CAGGCTTACACTCTCACAAACACGTTCTTTCGGCTTGCGCACAGGTGTCT
TTTTGTCGGGTTGGGCGCCTTTTGTGTGGTGCAACCTGTCCACAAGCCCC
TCATCTCCTTTCTGCTTCCCATGACCAAACGCGTGCGTGGTGCCTCTAGC
AGCAGTAGCCAGAGCGTCCTTGTCACCATCTTCTTGGCTGCGGCCTGCGC
TATTTTCATGAAGGCCGCAACATGCCTAGCCTGGAGGTGTTATGGCGCGG
CGGCGGGCAGAAGAGCCTCGGTGTCCGAAGTCCCCCTTTTGTCACGCCGT
CTCCCCTCCTCCGCTAGCCTCGTCAGGGTCAGAAGCCTTGGGCACCAGAC
CCTTATGGCGTCAGATGCCGCAGATGGCGGACGCGCTAGTGCTGCTGTCA
AACAGGACTCTAATAAGAGgtgcgtcttgaggatggcaggaggggaaacg
aaaatgcgtgcgtcttactgactccttttaaccaaatctcaacccaccgc
agAGCCGACAAGAAAGGCACAAGCCAACCACAGAAGGCCAAGCTCGACCT
CCAACCTCCCCGGGGCACGCGAGACTTCTATCCCGAAGAAATGCGCCTGC
GCAATTGGCTCTTTGGACATTGGCGGCAAGTGGCAAGGGAGCATGGCTTT
GAGGAATATGATGCCCCTGTGCTTGAATCAGAAGCTCTATATGTCCGCAA
GGCCGGGGAGGAAGTGACAGAACAACTCTACAATTTTGAGGATAAGGGAG
GGCGGCGTGTGGCTTTACGTCCGGAGATGACCCCGTCGTTGGCACGGATG
GTGATGGCGAAGAGGAACGGGCTAGTCTTGCCTGTCAAGTGGTTTTCGTT
TCCCCAGTGCTGGCGGTATGAACGCATGACCAGAGGTCGTCGTCGCGAGC
ATTACCAATGGAACATGGACGTGTGGGGCATATCAGGAGTGGAAGCTGAA
GCAGAGCTTCTTGCTGCAATTGTCAGCTTCTTTGCGCGCGTAGGACTCAC
GGCAAATGATGTGGGAATTAAGGTGAATAGCCGAGGAGTGTTGACAGAGG
TCCTTGCTGCTTTAGGTGTACCAGAGGAGAATTTTGCAGCTACCTGTGTG
TTGGTCGATAAATTGGAGAAGATACCGTTAAGTGCGATTCAGGACGATTT
GACGGCATTGGGCTTGGAGGAGTCAGTAGTGCTCCGGTTGCTAGAGGTGA
TCCAAAGTAAGGATGTGGAGGGCTTAGAAAAGGCGATTGGCAAGGATTCG
GCGGCCTTGGGTCAGCTTAGACAATTATTTGAATATGCACGCGCGTATGG
ATTCGATGATTGGTTGGTGCTAGATGCGAGCGTGGTGAGGGGCTTGGCGT
ACTATACTGGGGTGGTGTTCGAGGCCTTTGATCGACAGGGGGAACTGAGG
GCAATATGTGGGGGAGGAAGGTATGATAAATTGTTGGAAGCTTTCGGAGG
GGAGGCGCTGCCAGCCGTAGGGTTTGGATTTGGTGACGCGGTGATCATAG
AATTGCTTGAGAGTAAGAAGCTAGTGCCCGCGTTGCCGCTAAGGTTGGAT
GCGTCGGTGTTTGCGATGGAGACGGGGTTGCAGACGACGGCGATTGCGGC
GGCCACGTCGTTAAGGAGTGCGGGGCTGATGGTTGACCTGCAGTTGGAGG
CGCGCAAGACTAAGTGGGCATTTAAGCATGCCGATCGTCTAGGTGCGACA
TATGTGGTGTTGGTGGGGGCGGGAGAGGCGGCGGAGGGCAAGGTAAAGGT
GAAGCACATGGCCACTGGGCAGCAAGAAACGTTGCCTGTCGTGGACCTTG
GTAATTGGATGTTGGCAGCTTCGGCGGCCTCAGCAGGTGTGATGCACCCA
TAATGACAAGAATCTCTATAATTTATGAATGCAACAAGGAAAAAGAGACG
TTCATGCTG
back to top

protein sequence of NO07G02500.1

>NO07G02500.1-protein ID=NO07G02500.1-protein|Name=NO07G02500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=593bp
MRSQAYTLTNTFFRLAHRCLFVGLGAFCVVQPVHKPLISFLLPMTKRVRG
ASSSSSQSVLVTIFLAAACAIFMKAATCLAWRCYGAAAGRRASVSEVPLL
SRRLPSSASLVRVRSLGHQTLMASDAADGGRASAAVKQDSNKRADKKGTS
QPQKAKLDLQPPRGTRDFYPEEMRLRNWLFGHWRQVAREHGFEEYDAPVL
ESEALYVRKAGEEVTEQLYNFEDKGGRRVALRPEMTPSLARMVMAKRNGL
VLPVKWFSFPQCWRYERMTRGRRREHYQWNMDVWGISGVEAEAELLAAIV
SFFARVGLTANDVGIKVNSRGVLTEVLAALGVPEENFAATCVLVDKLEKI
PLSAIQDDLTALGLEESVVLRLLEVIQSKDVEGLEKAIGKDSAALGQLRQ
LFEYARAYGFDDWLVLDASVVRGLAYYTGVVFEAFDRQGELRAICGGGRY
DKLLEAFGGEALPAVGFGFGDAVIIELLESKKLVPALPLRLDASVFAMET
GLQTTAIAAATSLRSAGLMVDLQLEARKTKWAFKHADRLGATYVVLVGAG
EAAEGKVKVKHMATGQQETLPVVDLGNWMLAASAASAGVMHP*
back to top
Synonyms
Publications