Naga_100046g1, gene3427 (gene) Nannochloropsis gaditana

Overview
NameNaga_100046g1
Unique Namegene3427
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:694183..696236 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100046g1
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:694183..696236 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0006412translation
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL130ngnoL130Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G02500NO07G02500Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3558rna3558-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna3557rna3557-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3558rna3558Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna3557rna3557Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3558

>rna3558-protein ID=rna3558-protein|Name=rna3558|organism=Nannochloropsis gaditana|type=polypeptide|length=553bp
MRSIGAKRLGSSTRTQDFTTLLAVFCVLMKVTTCRAWHYSGRIATSRQML
SGIGPLLRRKSFIIHPATSTKSRQHISITANAAAEGSRGSAAVAQDLKNS
RETQKERQGKLDLNPPRGTRDFYPEDMRTRSWLFELWRQVARDHAFEEYD
APVLESEDLFVRKAGEEVTEQLYNFEDKGGRRVALRPEMTPSLARMVMAK
RNGLVMPVKWFSFPQCWRYERMTRGRRREHYQWNMDVWGVSGVEAEAELL
SAITTFFKRVGLTAEDVGIKVSSRGVLAEVLAALDVPDAKFSATCVLVDK
LEKLPLEAIQGDLTALGLEESVVRRLLDVVQSRDFPSLETAIGAKSTALA
QLRQLFEYARAYNFEEWLVLDASVVRGLAYYTGIVFEAFDRKGELRAICG
GGRYDKLLETFGGEALPAVGFGFGDAVIMELLESKGLVPSLSLGLDALVF
AMEAGLQGIAIRAATSLRAAGLTVDLQLEARKTKWALKHADRLGATYVVI
VGPEEVAGCNVRVKEMATGQQHVVAIANLESWISATFTTTSPESAFADSV
NRS
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protein sequence of rna3557

>rna3557-protein ID=rna3557-protein|Name=rna3557|organism=Nannochloropsis gaditana|type=polypeptide|length=552bp
MRSIGAKRLGSSTRTQDFTTLLAVFCVLMKVTTCRAWHYSGRIATSRQML
SGIGPLLRRKSFIIHPATSTKSRQHISITANAAAEGSRGSAAVAQDLKNR
ETQKERQGKLDLNPPRGTRDFYPEDMRTRSWLFELWRQVARDHAFEEYDA
PVLESEDLFVRKAGEEVTEQLYNFEDKGGRRVALRPEMTPSLARMVMAKR
NGLVMPVKWFSFPQCWRYERMTRGRRREHYQWNMDVWGVSGVEAEAELLS
AITTFFKRVGLTAEDVGIKVSSRGVLAEVLAALDVPDAKFSATCVLVDKL
EKLPLEAIQGDLTALGLEESVVRRLLDVVQSRDFPSLETAIGAKSTALAQ
LRQLFEYARAYNFEEWLVLDASVVRGLAYYTGIVFEAFDRKGELRAICGG
GRYDKLLETFGGEALPAVGFGFGDAVIMELLESKGLVPSLSLGLDALVFA
MEAGLQGIAIRAATSLRAAGLTVDLQLEARKTKWALKHADRLGATYVVIV
GPEEVAGCNVRVKEMATGQQHVVAIANLESWISATFTTTSPESAFADSVN
RS
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Synonyms
Publications