jgi.p|Nanoce1779_2|580814, gene_2576 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|580814
Unique Namegene_2576
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_5:692620..693920 -

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Properties
Property NameValue
TranscriptId580900
ProteinId580814
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_5supercontigscaffold_5:692620..693920 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0004821histidine-tRNA ligase activity
GO:0004812aminoacyl-tRNA ligase activity
GO:0005524ATP binding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0006427histidyl-tRNA aminoacylation
GO:0006412translation
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL072ncniL072Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region
ncniL071ncniL071Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G02500NO07G02500Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|580814mRNA_2576-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|580814mRNA_2576Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|580814

>mRNA_2576-protein ID=mRNA_2576-protein|Name=jgi.p|Nanoce1779_2|580814|organism=Nannochloropsis oceanica|type=polypeptide|length=359bp
MTPSLARMVMAKRNGLVLPVKWFSFPQCWRYERMTRGRRREHYQWNMDVW
GISGVEAEAELLAAIVSFFARVGLTANDVGIKVNSRGVLTEVLAALGVPE
ENFAATCVLVDKLEKIPLSAIQDDLTALGLEESVVLRLLEVIQSKDVEGL
EKAIGKDSAALGQLRQLFEYARAYGFDDWLVLDASVVRGLAYYTGVVFEA
FDRQGELRAICGGGRYDKLLEAFGGEALPAVGFGFGDAVIIELLESKKLV
PALPLRLDASVFAMETGLQTTAIAAATSLRSAGLMVDLQLEARKTKWAFK
HADRLGATYVVLVGAGEAAEGKVKVKHMATGQQETVPVVDLGNWMLAASA
ASAGVMHP*
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Synonyms
Publications