NO07G02480, NO07G02480 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G02480 vs. NCBI_GenBank
Match: XP_020638941.1 (transmembrane protein 53 [Pogona vitticeps]) HSP 1 Score: 89.0 bits (219), Expect = 3.100e-14 Identity = 74/288 (25.69%), Postives = 126/288 (43.75%), Query Frame = 0 Query: 47 IVPVPAEGETPRAIESRDKVKL-VVVLLGWLGCQDRHLKKYAEMYHESMNCEVVLRHTVPASRLLRRKQWGAVRAAEEIMTLIPLFFPDAK-----VVVHYFSNGGCFVHRRMLLLQNGHYRQGDARRFCCDPEPPTDDYQFPQLAGTIFDSCPVAADAEAGARAVSARVQSPIIRLLMYATIRFGLEIYGIAQSWRYEQKYIEHIENDHTLV-----PSLYIFSEDDTITDPALVERVVAKRKAYLTSQGLPADVMLETWKITDPSLHVCHYARYPIEYQKKIKDFL 324 +V +P+E + E KV L VV+LLGW GC+DR+L+KY+ +Y + C VV+R+T P + + G + L+ + F D K + +H FSNGG ++R ++ L + +Q ++ GT+FDS P + + G RA+S + + + + F + + + +++ D L P LY++S+ D +T VE ++ R+ V+++ D S HV H YP Y FL Sbjct: 11 VVELPSEQSAGASTEKGAKVNLPVVILLGWAGCKDRYLEKYSTIYLQK-GC-VVIRYTAPWRLVFFSESLGIKSLQDLAKKLLEVLF-DYKLERRPLFIHVFSNGGSMLYRYIVELLH-----------------TDQQFQHLKVVGTVFDSAPGQKNLKGGLRALSVVLAPYSVFVKYLLLLTFAVMVVSLRVMLYPLTRFVHETHYDAMLKHPSGWPELYLYSKADPVTRANDVENMIEARR--------QRQVLVKAVDFMD-SDHVSHLRAYPTSYMTHCTSFL 269
BLAST of NO07G02480 vs. NCBI_GenBank
Match: OXB68504.1 (hypothetical protein ASZ78_000441 [Callipepla squamata]) HSP 1 Score: 89.0 bits (219), Expect = 3.100e-14 Identity = 79/291 (27.15%), Postives = 127/291 (43.64%), Query Frame = 0 Query: 42 RAALRIVPVPAEGETPRAIESRDKVKLVVVLLGWLGCQDRHLKKYAEMYHESMNCEVVLRHTVPASRLLRRKQWGAVRAAEEIMTLIPLFF----PDAKVVVHYFSNGGCFVHRRMLLLQNGHYRQGDARRFCCDPEPPTDDYQFPQLAGTIFDSCPVAADAEAGARAV-----SARVQSPIIRLLMYATIRFGLEIYGIAQSWRYEQKYIEHIENDHTLVPSLYIFSEDDTITDPALVERVVAKRKAYLTSQGLPADVMLETWKITDPSLHVCHYARYPIEYQKKIKDFL 324 +AA+++ P A G + A E + VV+LLGW GCQDRHL KY+ +Y + C V+ R+T P + + +G L+ L F + V+ H FSNGG ++R +++ H +Q ++ ++AGT+FDS P + RA+ S V + +L +AT L I + + + + + + P LY++S+ D I D V+ + R+ V ++ TD S HV H YP Y FL Sbjct: 7 QAAVQLAPGAARGSS--AEEGHADGQPVVILLGWAGCQDRHLAKYSAVYSQK-GCSVI-RYTAPWRMVFFSESFGIQSLRTPAKRLLELLFEHSIENRPVLFHVFSNGGAMLYR--YIVEALHSQQ---------------PFENIRVAGTVFDSAPGRRNLRGALRALATVLASTNVLLRYLLMLTFATTVVLLRILLYPLTRFIHENHYDALLKAPSRWPELYLYSQADAIIDAGDVKHMADARQ--------QLGVSVKAVDFTD-SAHVSHMRVYPTYYSTLCTAFL 267
BLAST of NO07G02480 vs. NCBI_GenBank
Match: XP_003456235.1 (PREDICTED: transmembrane protein 53 [Oreochromis niloticus]) HSP 1 Score: 88.6 bits (218), Expect = 4.000e-14 Identity = 71/267 (26.59%), Postives = 121/267 (45.32%), Query Frame = 0 Query: 69 VVVLLGWLGCQDRHLKKYAEMYHESMNCEVVLRHTVPASRLLRRKQWGAVRAAEEIMTLIPLFF----PDAKVVVHYFSNGGCFVHRRMLLLQNGHYRQGDARRFCCDPEPPTDDYQFPQLA--GTIFDSCPVAADAEAGARAVSARVQ---SPIIR---LLMYATIRFGLEIYGIAQSWRYEQKYIEHIENDHTLVPSLYIFSEDDTITDPALVERVVAKRKAYLTSQGLPADVMLETWKITDPSLHVCHYARYPIEYQKKIKDFL 324 VV+LLGW GC+D+HL KY+ +Y+E C V +R+T P + + +G + L+ + + ++ + H FSNGG ++R ++ L + D QF L+ G I DS P + + RA++A + SP++R L+++A F L I + + + + +++ P +++S DD + VE + L +G+P D S HV H+ +P EY K DFL Sbjct: 29 VVILLGWAGCKDKHLSKYSSIYNE-QGC-VTIRYTAPLKTVFISESFGYKELRNTALKLLEILYDYEVENSPIFFHTFSNGGFMLYRYIVELLH-------------------SDKQFSSLSVVGAIVDSAPGSGNVRGALRALTATLGPKISPVLRYILLVLFAVTVFLLRIVLYPLTKYIHKNHYDAVQDRPPAWPHFFLYSRDDQVIRHKDVEVFLET----LKQKGVPVDSFDFV-----SSPHVGHFRYFPEEYTLKCHDFL 265
BLAST of NO07G02480 vs. NCBI_GenBank
Match: XP_005943825.1 (PREDICTED: transmembrane protein 53 [Haplochromis burtoni]) HSP 1 Score: 88.6 bits (218), Expect = 4.000e-14 Identity = 70/267 (26.22%), Postives = 121/267 (45.32%), Query Frame = 0 Query: 69 VVVLLGWLGCQDRHLKKYAEMYHESMNCEVVLRHTVPASRLLRRKQWGAVRAAEEIMTLIPLFF----PDAKVVVHYFSNGGCFVHRRMLLLQNGHYRQGDARRFCCDPEPPTDDYQFPQLA--GTIFDSCPVAADAEAGARAVSARVQ---SPIIR---LLMYATIRFGLEIYGIAQSWRYEQKYIEHIENDHTLVPSLYIFSEDDTITDPALVERVVAKRKAYLTSQGLPADVMLETWKITDPSLHVCHYARYPIEYQKKIKDFL 324 VV+LLGW GC+D+HL KY+ +Y+E C V +R+T P + + +G + L+ + + ++ + H FSNGG ++R ++ L + D QF L+ G I DS P + + RA++A + SP++R L+++A F L I + + + + +++ P +++S DD + +E + L +G+P D S HV H+ +P EY K DFL Sbjct: 29 VVILLGWAGCKDKHLSKYSSIYNE-QGC-VTIRYTAPLKTVFISESFGYKELRNTALKLLEILYDYEVENSPIFFHTFSNGGFMLYRYIVELLH-------------------SDKQFSSLSVVGAIVDSAPGSGNVRGALRALTATLGPKISPVLRYILLVLFAVTVFLLRIVLYPLTKYIHKNHYDAVQDRPPAWPHFFLYSRDDQVIRHKDIEGFLET----LKQKGVPVDSFDFV-----SSPHVGHFRYFPEEYTLKCHDFL 265
BLAST of NO07G02480 vs. NCBI_GenBank
Match: EDL90219.1 (transmembrane protein 53 (predicted), isoform CRA_a [Rattus norvegicus]) HSP 1 Score: 88.6 bits (218), Expect = 4.000e-14 Identity = 72/281 (25.62%), Postives = 127/281 (45.20%), Query Frame = 0 Query: 53 EGETPRAIESRDKVKLVVVLLGWLGCQDRHLKKYAEMYHESMNCEVVLRHTVPASRLLRRKQWGAVRAAEEIMTLIPLFF----PDAKVVVHYFSNGGCFVHRRMLLLQNGHYRQGDARRFCCDPEPPTDDYQFPQLAGTIFDSCPVAADAEAGARAVSARVQ--SPIIRLLMYATIRFGLEIYGI---AQSWRYEQKYIEHIENDHTLVPSLYIFSEDDTITDPALVERVVAKRKAYLTS-QGLPADVMLETWKITDPSLHVCHYARYPIEYQKKIKDFL 324 +G+ + + K + VV+LLGW GC+D++L KY+ +YH+ C +V+R+T P + + G L+ L F ++ H FSN G ++R +L L H R ++ + GTIFDS P +D RA++ ++ ++RLL+ A + ++ + + + + +++ + P LY++S D + VER+V +R A+ S +G+ D + S HV H YP Y DF+ Sbjct: 4 DGKNSQGGKEAGKQQPVVILLGWGGCRDKNLAKYSAIYHK-RGC-IVIRYTAPWHMVFFSESLGIPSLRVVAQKLLELLFDYEIEREPLLFHVFSNAGVMLYRYVLELLQTHQR-----------------FRHLHVVGTIFDSGPGDSDLIGALRALATILERRPAVLRLLLLAAFALVVVLFHFLFAPFTALFHTHFYDRLQDSGSCWPELYLYSRADKVVSARDVERMVEERLAHQVSVRGV--DFV--------TSAHVSHLRDYPTYYTSLCVDFM 255
BLAST of NO07G02480 vs. NCBI_GenBank
Match: OXB80096.1 (hypothetical protein H355_013019 [Colinus virginianus]) HSP 1 Score: 88.6 bits (218), Expect = 4.000e-14 Identity = 79/291 (27.15%), Postives = 127/291 (43.64%), Query Frame = 0 Query: 42 RAALRIVPVPAEGETPRAIESRDKVKLVVVLLGWLGCQDRHLKKYAEMYHESMNCEVVLRHTVPASRLLRRKQWGAVRAAEEIMTLIPLFF----PDAKVVVHYFSNGGCFVHRRMLLLQNGHYRQGDARRFCCDPEPPTDDYQFPQLAGTIFDSCPVAADAEAGARAV-----SARVQSPIIRLLMYATIRFGLEIYGIAQSWRYEQKYIEHIENDHTLVPSLYIFSEDDTITDPALVERVVAKRKAYLTSQGLPADVMLETWKITDPSLHVCHYARYPIEYQKKIKDFL 324 +AA+++ P A G + A E + VV+LLGW GCQDRHL KY+ +Y + C V+R+T P + + +G L+ L F + V+ H FSNGG ++R +++ H +Q ++ ++AGT+FDS P + RA+ S V + +L +AT L I + + + + + + P LY++S+ D I D V+ + R+ V ++ TD S HV H YP Y FL Sbjct: 2 QAAVQLAPGAARGSS--AEEGHADGQPVVILLGWAGCQDRHLAKYSAVYSQK-GC-TVIRYTAPWRMVFFSESFGIQSLRTPAERLLELLFEHSIENRPVLFHVFSNGGAMLYR--YIVEALHSQQ---------------PFENIRVAGTVFDSAPGRRNLRGALRALATILASTNVLLRYLLMLTFATTVVLLRILLYPLTRFIHENHYDALLKAPSRWPELYLYSQADAIIDAGDVKHMADARQ--------QLGVSVKAVDFTD-SAHVSHMRVYPTYYSTLCTAFL 262
BLAST of NO07G02480 vs. NCBI_GenBank
Match: XP_024063256.1 (transmembrane protein 53 isoform X1 [Terrapene mexicana triunguis]) HSP 1 Score: 88.6 bits (218), Expect = 4.000e-14 Identity = 74/265 (27.92%), Postives = 121/265 (45.66%), Query Frame = 0 Query: 69 VVVLLGWLGCQDRHLKKYAEMYHESMNCEVVLRHTVPASRLLRRKQWGAVRAAEEIMTLIPLFFPDAKV-----VVHYFSNGGCFVHRRMLLLQNGHYRQGDARRFCCDPEPPTDDYQFPQLAGTIFDSCPVAADAEAGARAVSARVQSPII-----RLLMYATIRFGLEIYGIAQSWRYEQKYIEHIENDHTLVPSLYIFSEDDTITDPALVERVVAKRKAYLTSQGLPADVMLETWKITDPSLHVCHYARYPIEYQKKIKDFL 324 VV+LLGW GC+D+HL KY+ +YH+ C VLR+T P + +G L+ L F D K+ + H FSNGG ++R +L L + H RQ + ++ GT+FDS P + RA++A + S + LL++A + L I + + + + + + N + P LY++S+ D I + VE ++ R+ + +V + +D S HV H YP Y F+ Sbjct: 9 VVILLGWAGCRDKHLVKYSTIYHQK-GC-TVLRYTAPWKMTFFAESFGIQSLRTPARKLLELLF-DYKIEKKPLLFHVFSNGGVMLYRYILELIHTH-RQ----------------FSSLKVVGTVFDSAPGRRNMVGSLRALAAVLGSTNVLLKYCLLLVFAILVVVLRILLHPVTRFFHETHYDALLNGPSRWPELYLYSKGDRIILASDVEHMIEARRQH--------NVAVRAVDFSD-SAHVSHLLAYPSYYMSLCTSFM 244
BLAST of NO07G02480 vs. NCBI_GenBank
Match: ERE84079.1 (transmembrane protein 53-like isoform 2 [Cricetulus griseus]) HSP 1 Score: 88.2 bits (217), Expect = 5.200e-14 Identity = 73/281 (25.98%), Postives = 127/281 (45.20%), Query Frame = 0 Query: 54 GETPRAIESRDKVKL-VVVLLGWLGCQDRHLKKYAEMYHESMNCEVVLRHTVPASRLLRRKQWGAVRAAEEIMTLIPLFF----PDAKVVVHYFSNGGCFVHRRMLLLQNGHYRQGDARRFCCDPEPPTDDYQFPQLAGTIFDSCPVAADAEAGARAVSARVQ--SPIIRLLM---YATIRFGLEIYGIAQSWRYEQKYIEHIENDHTLVPSLYIFSEDDTITDPALVERVVAKRKAYLTSQGLPADVMLETWKITDPSLHVCHYARYPIEYQKKIKDFLQ 325 GE P + + +L VV+LLGW GC+D++L KY+ +YH+ C +V+R+T P + + G L+ L F ++ H FSNGG ++R +L L H R ++ + GT+FDS P ++ RA++ ++ ++RLL+ +A + L + + + + +++ + P LY++S D + VER+V +R A+ V++ + S HV H YP Y DF+Q Sbjct: 27 GENPCHDGKKARKRLPVVILLGWGGCRDKNLAKYSAIYHK-RGC-IVIRYTAPWHMVFFSESLGIPSLRVMAQKLLELLFDYEIEREPLLFHVFSNGGVMLYRYVLELLQTHQR-----------------FRHLHVVGTVFDSGPGDSNLVGALRALAIILERRPTVLRLLLLVAFALVVVLLHFLLSPFTALFHTHFYDRLQDSGSHWPELYLYSRADEVVSARDVERMVEERLAH--------QVLVRSVDFVS-SAHVSHLRDYPTYYTSLCVDFMQ 279
BLAST of NO07G02480 vs. NCBI_GenBank
Match: XP_011762239.1 (transmembrane protein 53 isoform X1 [Macaca nemestrina]) HSP 1 Score: 88.2 bits (217), Expect = 5.200e-14 Identity = 73/266 (27.44%), Postives = 124/266 (46.62%), Query Frame = 0 Query: 69 VVVLLGWLGCQDRHLKKYAEMYHESMNCEVVLRHTVPASRLLRRKQWGAVRAAEEIMTLIPLFF----PDAKVVVHYFSNGGCFVHRRML-LLQNGHYRQGDARRFCCDPEPPTDDYQFPQLAGTIFDSCPVAADAEAGARAVSARVQ--SPIIRLLMYATIRFGLEIYGIAQ---SWRYEQKYIEHIENDHTLVPSLYIFSEDDTITDPALVERVVAKRKAYLTSQGLPADVMLETWKITDPSLHVCHYARYPIEYQKKIKDFLQ 325 VV+LLGW GC+D++L KY+ +YH+ C +V+R+T P + + G L+ L F ++ H FSNGG ++R +L LLQ RRFC ++ GTIFDS P ++ RA++A ++ + ++RLL+ + ++ + + + + + +++ + P LY++S D + VER+V +A L + L V + S HV H YP Y DF++ Sbjct: 37 VVILLGWGGCKDKNLAKYSAIYHK-RGC-IVIRYTAPWHMVFFSESLGIPSLRVLAQKLLELLFDYEIEKEPLLFHVFSNGGVMLYRYVLELLQ--------TRRFC-----------HLRVVGTIFDSAPGDSNLVGALRALAAILERRAAVLRLLLLVAFALVVVLFHVLLAPITALFHTHFYDRLQDAGSRWPELYLYSRADEVVSARDVERMV---EARLARRVLARSVDFVS------SAHVSHLRDYPTYYTSLCVDFMR 272
BLAST of NO07G02480 vs. NCBI_GenBank
Match: XP_011762240.1 (transmembrane protein 53 isoform X2 [Macaca nemestrina]) HSP 1 Score: 88.2 bits (217), Expect = 5.200e-14 Identity = 73/266 (27.44%), Postives = 124/266 (46.62%), Query Frame = 0 Query: 69 VVVLLGWLGCQDRHLKKYAEMYHESMNCEVVLRHTVPASRLLRRKQWGAVRAAEEIMTLIPLFF----PDAKVVVHYFSNGGCFVHRRML-LLQNGHYRQGDARRFCCDPEPPTDDYQFPQLAGTIFDSCPVAADAEAGARAVSARVQ--SPIIRLLMYATIRFGLEIYGIAQ---SWRYEQKYIEHIENDHTLVPSLYIFSEDDTITDPALVERVVAKRKAYLTSQGLPADVMLETWKITDPSLHVCHYARYPIEYQKKIKDFLQ 325 VV+LLGW GC+D++L KY+ +YH+ C +V+R+T P + + G L+ L F ++ H FSNGG ++R +L LLQ RRFC ++ GTIFDS P ++ RA++A ++ + ++RLL+ + ++ + + + + + +++ + P LY++S D + VER+V +A L + L V + S HV H YP Y DF++ Sbjct: 20 VVILLGWGGCKDKNLAKYSAIYHK-RGC-IVIRYTAPWHMVFFSESLGIPSLRVLAQKLLELLFDYEIEKEPLLFHVFSNGGVMLYRYVLELLQ--------TRRFC-----------HLRVVGTIFDSAPGDSNLVGALRALAAILERRAAVLRLLLLVAFALVVVLFHVLLAPITALFHTHFYDRLQDAGSRWPELYLYSRADEVVSARDVERMV---EARLARRVLARSVDFVS------SAHVSHLRDYPTYYTSLCVDFMR 255 The following BLAST results are available for this feature:
BLAST of NO07G02480 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G02480 ID=NO07G02480|Name=NO07G02480|organism=Nannochloropsis oceanica|type=gene|length=1954bpback to top protein sequence of NO07G02480.1 >NO07G02480.1-protein ID=NO07G02480.1-protein|Name=NO07G02480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=443bpback to top protein sequence of NO07G02480.2 >NO07G02480.2-protein ID=NO07G02480.2-protein|Name=NO07G02480.2|organism=Nannochloropsis oceanica|type=polypeptide|length=340bpback to top protein sequence of NO07G02480.3 >NO07G02480.3-protein ID=NO07G02480.3-protein|Name=NO07G02480.3|organism=Nannochloropsis oceanica|type=polypeptide|length=331bpback to top Synonyms
Publications
|